CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1333

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31333S1333GS2151GnonsynAgtGgt1521152116716-6718
ORF1ab/nsp31333S1333IS2151InonsynaGtaTt99999916716-6718
ORF1ab/nsp31333S1333delS2151deldelAGT---19219216716-6718
ORF1ab/nsp31333S1333NS2151NnonsynaGtaAt16716716716-6718
ORF1ab/nsp31333S1333SS2151SsynagTagC11311316716-6718
ORF1ab/nsp31333S1333CS2151CnonsynAgtTgt313116716-6718
ORF1ab/nsp31333S1333RS2151RnonsynagTagA1480.5714296716-6718
ORF1ab/nsp31333S1333RS2151RnonsynAgtCgt1430.2142866716-6718
ORF1ab/nsp31333S1333RS2151RnonsynagTagG1420.1428576716-6718
ORF1ab/nsp31333S1333RS2151RnonsynAgTCgC1410.07142866716-6718
ORF1ab/nsp31333S1333TS2151TnonsynaGtaCt960.6666676716-6718
ORF1ab/nsp31333S1333TS2151TnonsynaGTaCA930.3333336716-6718
ORF1ab/nsp31333S1333del1S2151del1delAgt-gt650.8333336716-6718
ORF1ab/nsp31333S1333del1S2151del1delAGt-At610.1666676716-6718
ORF1ab/nsp31333S1333AS2151AnonsynAGtGCt4416716-6718
ORF1ab/nsp31333S1333YS2151YnonsynAGtTAt3316716-6718
ORF1ab/nsp31333S1333DS2151DnonsynAGtGAt2216716-6718
ORF1ab/nsp31333S1333FS2151FnonsynAGtTTt1116716-6718
ORF1ab/nsp31333S1333LS2151LnonsynAGTCTA1116716-6718
ORF1ab/nsp31333S1333KS2151KnonsynaGTaAG1116716-6718

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31333S1333GAgtGgt15211521All0.000291
ORF1ab/nsp31333S1333IaGtaTt999999All0.000191
ORF1ab/nsp31333S1333GAgtGgt691691AY.250.004156
ORF1ab/nsp31333S1333IaGtaTt572572B.1.6280.20155
ORF1ab/nsp31333S1333delAGT---192192All0.000037
ORF1ab/nsp31333S1333IaGtaTt170170B.1.4270.008585
ORF1ab/nsp31333S1333NaGtaAt167167All0.000032
ORF1ab/nsp31333S1333GAgtGgt158158B.1.1.3760.940476
ORF1ab/nsp31333S1333GAgtGgt117117AY.430.000518
ORF1ab/nsp31333S1333SagTagC113113All0.000022
ORF1ab/nsp31333S1333GAgtGgt112112B.1.1.70.0001
ORF1ab/nsp31333S1333GAgtGgt111111AY.440.000676
ORF1ab/nsp31333S1333delAGT---8888B.1.1.70.000079
ORF1ab/nsp31333S1333IaGtaTt7171AY.40.000111
ORF1ab/nsp31333S1333NaGtaAt6464AY.330.004274
ORF1ab/nsp31333S1333GAgtGgt6363AY.40.000098
ORF1ab/nsp31333S1333IaGtaTt4545B.1.20.000396
ORF1ab/nsp31333S1333GAgtGgt4141B.1.177.350.028334
ORF1ab/nsp31333S1333IaGtaTt3838B.1.1.70.000034
ORF1ab/nsp31333S1333CAgtTgt3131All0.000006
ORF1ab/nsp31333S1333NaGtaAt3131AY.40.000048
ORF1ab/nsp31333S1333GAgtGgt2929B.1.617.20.000109
ORF1ab/nsp31333S1333CAgtTgt2121B.1.20.000185
ORF1ab/nsp31333S1333IaGtaTt2121B.1.617.20.000079
ORF1ab/nsp31333S1333SagTagC2020B.1.1.70.000018
ORF1ab/nsp31333S1333GAgtGgt1919B.1.1.2220.003876
ORF1ab/nsp31333S1333SagTagC1919C.370.002205
ORF1ab/nsp31333S1333GAgtGgt1717P.10.000268
ORF1ab/nsp31333S1333RagTagA814All0.000002
ORF1ab/nsp31333S1333RAgtCgt314All0.000001
ORF1ab/nsp31333S1333RagTagG214All0
ORF1ab/nsp31333S1333RAgTCgC114All0
ORF1ab/nsp31333S1333NaGtaAt1414B.1.1.70.000013
ORF1ab/nsp31333S1333delAGT---1313B.1.1770.000171
ORF1ab/nsp31333S1333GAgtGgt1313B.1.20.000114
ORF1ab/nsp31333S1333SagTagC1212AY.40.000019
ORF1ab/nsp31333S1333IaGtaTt1212B.10.00011
ORF1ab/nsp31333S1333GAgtGgt1111AY.390.000272
ORF1ab/nsp31333S1333GAgtGgt1111B.1.4290.000259
ORF1ab/nsp31333S1333SagTagC1111B.1.617.20.000041
ORF1ab/nsp31333S1333delAGT---1010AY.40.000016
ORF1ab/nsp31333S1333GAgtGgt1010B.10.000092
ORF1ab/nsp31333S1333SagTagC1010B.1.20.000088
ORF1ab/nsp31333S1333TaGtaCt69All0.000001
ORF1ab/nsp31333S1333TaGTaCA39All0.000001
ORF1ab/nsp31333S1333NaGtaAt99AY.250.000054
ORF1ab/nsp31333S1333SagTagC88AY.1190.000282
ORF1ab/nsp31333S1333GAgtGgt88B.1.1.3060.003507
ORF1ab/nsp31333S1333delAGT---77B.1.617.20.000026
ORF1ab/nsp31333S1333del1Agt-gt56All0.000001
ORF1ab/nsp31333S1333del1AGt-At16All0
ORF1ab/nsp31333S1333delAGT---66AY.4.50.000645
ORF1ab/nsp31333S1333delAGT---66AY.430.000027
ORF1ab/nsp31333S1333NaGtaAt66AY.9.10.000502
ORF1ab/nsp31333S1333IaGtaTt55AY.1030.000031
ORF1ab/nsp31333S1333SagTagC55AY.30.00005
ORF1ab/nsp31333S1333NaGtaAt55AY.30.00005
ORF1ab/nsp31333S1333IaGtaTt55AY.420.000201
ORF1ab/nsp31333S1333SagTagC55B.10.000046
ORF1ab/nsp31333S1333RagTagA55B.1.1.70.000004
ORF1ab/nsp31333S1333GAgtGgt55B.1.2400.001078
ORF1ab/nsp31333S1333NaGtaAt55B.1.617.20.000019
ORF1ab/nsp31333S1333GAgtGgt55P.1.170.000809
ORF1ab/nsp31333S1333AAGtGCt44All0.000001
ORF1ab/nsp31333S1333GAgtGgt44AY.1030.000025
ORF1ab/nsp31333S1333IaGtaTt44AY.260.000113
ORF1ab/nsp31333S1333GAgtGgt44AY.290.000063
ORF1ab/nsp31333S1333IaGtaTt44AY.430.000018
ORF1ab/nsp31333S1333GAgtGgt44AY.50.000083
ORF1ab/nsp31333S1333NaGtaAt44B.10.000037
ORF1ab/nsp31333S1333IaGtaTt44B.1.1.4630.25
ORF1ab/nsp31333S1333GAgtGgt44B.1.3950.028169
ORF1ab/nsp31333S1333GAgtGgt44B.1.5820.001963
ORF1ab/nsp31333S1333YAGtTAt33All0.000001
ORF1ab/nsp31333S1333GAgtGgt33AY.1190.000106
ORF1ab/nsp31333S1333NaGtaAt33AY.340.000291
ORF1ab/nsp31333S1333IaGtaTt33AY.830.005172
ORF1ab/nsp31333S1333delAGT---33B.10.000027
ORF1ab/nsp31333S1333delAGT---33B.1.10.000054
ORF1ab/nsp31333S1333IaGtaTt33B.1.10.000054
ORF1ab/nsp31333S1333GAgtGgt33B.1.1770.00004
ORF1ab/nsp31333S1333TaGTaCA33B.1.1770.00004
ORF1ab/nsp31333S1333delAGT---33B.1.177.160.001993
ORF1ab/nsp31333S1333delAGT---33B.1.177.40.000633
ORF1ab/nsp31333S1333delAGT---33B.1.36.170.001482
ORF1ab/nsp31333S1333IaGtaTt33B.1.4290.000071
ORF1ab/nsp31333S1333IaGtaTt33P.1.120.001452
ORF1ab/nsp31333S1333GAgtGgt33P.1.140.000143
ORF1ab/nsp31333S1333DAGtGAt22All0
ORF1ab/nsp31333S1333GAgtGgt22AY.1020.000053
ORF1ab/nsp31333S1333NaGtaAt22AY.1030.000012
ORF1ab/nsp31333S1333SagTagC22AY.1210.000271
ORF1ab/nsp31333S1333GAgtGgt22AY.140.000176
ORF1ab/nsp31333S1333delAGT---22AY.190.002281
ORF1ab/nsp31333S1333GAgtGgt22AY.23.10.000835
ORF1ab/nsp31333S1333DAGtGAt22AY.250.000012
ORF1ab/nsp31333S1333IaGtaTt22AY.250.000012
ORF1ab/nsp31333S1333delAGT---22AY.250.000012
ORF1ab/nsp31333S1333SagTagC22AY.260.000057
ORF1ab/nsp31333S1333GAgtGgt22AY.30.00002
ORF1ab/nsp31333S1333IaGtaTt22AY.30.00002
ORF1ab/nsp31333S1333GAgtGgt22AY.3.10.000171
ORF1ab/nsp31333S1333NaGtaAt22AY.390.000049
ORF1ab/nsp31333S1333IaGtaTt22AY.390.000049
ORF1ab/nsp31333S1333GAgtGgt22AY.420.00008
ORF1ab/nsp31333S1333RAgtCgt22AY.430.000009
ORF1ab/nsp31333S1333GAgtGgt22AY.450.000243
ORF1ab/nsp31333S1333GAgtGgt22AY.46.60.000144
ORF1ab/nsp31333S1333delAGT---22AY.50.000041
ORF1ab/nsp31333S1333AAGtGCt22AY.850.000854
ORF1ab/nsp31333S1333GAgtGgt22AY.850.000854
ORF1ab/nsp31333S1333GAgtGgt22B0.000256
ORF1ab/nsp31333S1333TaGtaCt22B.10.000018
ORF1ab/nsp31333S1333CAgtTgt22B.10.000018
ORF1ab/nsp31333S1333GAgtGgt22B.1.1.2140.000111
ORF1ab/nsp31333S1333NaGtaAt22B.1.1.2160.001781
ORF1ab/nsp31333S1333NaGtaAt22B.1.1.3010.002358
ORF1ab/nsp31333S1333IaGtaTt22B.1.1.3690.000892
ORF1ab/nsp31333S1333IaGtaTt22B.1.1.630.000772
ORF1ab/nsp31333S1333SagTagC22B.1.1770.000026
ORF1ab/nsp31333S1333delAGT---22B.1.177.870.001456
ORF1ab/nsp31333S1333GAgtGgt22B.1.2670.037037
ORF1ab/nsp31333S1333GAgtGgt22B.1.3510.000059
ORF1ab/nsp31333S1333delAGT---22B.1.360.000292
ORF1ab/nsp31333S1333GAgtGgt22B.1.4270.000101
ORF1ab/nsp31333S1333GAgtGgt22B.1.466.20.000782
ORF1ab/nsp31333S1333GAgtGgt22B.1.5240.002813
ORF1ab/nsp31333S1333GAgtGgt22B.1.6090.000959
ORF1ab/nsp31333S1333SagTagC22P.10.000032
ORF1ab/nsp31333S1333NaGtaAt110.055556
ORF1ab/nsp31333S1333SagTagC11A0.000387
ORF1ab/nsp31333S1333delAGT---11A.210.00277
ORF1ab/nsp31333S1333SagTagC11A.280.002646
ORF1ab/nsp31333S1333FAGtTTt11All0
ORF1ab/nsp31333S1333KaGTaAG11All0
ORF1ab/nsp31333S1333LAGTCTA11All0
ORF1ab/nsp31333S1333GAgtGgt11AY.1000.000046
ORF1ab/nsp31333S1333IaGtaTt11AY.1020.000027
ORF1ab/nsp31333S1333TaGtaCt11AY.1030.000006
ORF1ab/nsp31333S1333delAGT---11AY.1030.000006
ORF1ab/nsp31333S1333SagTagC11AY.110.001339
ORF1ab/nsp31333S1333GAgtGgt11AY.1110.000183
ORF1ab/nsp31333S1333CAgtTgt11AY.1130.000142
ORF1ab/nsp31333S1333NaGtaAt11AY.1130.000142
ORF1ab/nsp31333S1333GAgtGgt11AY.1200.000037
ORF1ab/nsp31333S1333IaGtaTt11AY.1200.000037
ORF1ab/nsp31333S1333delAGT---11AY.130.000161
ORF1ab/nsp31333S1333IaGtaTt11AY.140.000088
ORF1ab/nsp31333S1333IaGtaTt11AY.200.000039
ORF1ab/nsp31333S1333GAgtGgt11AY.200.000039
ORF1ab/nsp31333S1333NaGtaAt11AY.230.00007
ORF1ab/nsp31333S1333SagTagC11AY.23.10.000417
ORF1ab/nsp31333S1333SagTagC11AY.250.000006
ORF1ab/nsp31333S1333LAGTCTA11AY.260.000028
ORF1ab/nsp31333S1333GAgtGgt11AY.260.000028
ORF1ab/nsp31333S1333NaGtaAt11AY.290.000016
ORF1ab/nsp31333S1333del1Agt-gt11AY.30.00001
ORF1ab/nsp31333S1333GAgtGgt11AY.330.000067
ORF1ab/nsp31333S1333GAgtGgt11AY.340.000097
ORF1ab/nsp31333S1333IaGtaTt11AY.340.000097
ORF1ab/nsp31333S1333delAGT---11AY.360.000148
ORF1ab/nsp31333S1333NaGtaAt11AY.360.000148
ORF1ab/nsp31333S1333GAgtGgt11AY.370.000316
ORF1ab/nsp31333S1333AAGtGCt11AY.390.000025
ORF1ab/nsp31333S1333delAGT---11AY.390.000025
ORF1ab/nsp31333S1333SagTagC11AY.390.000025
ORF1ab/nsp31333S1333SagTagC11AY.39.10.00004
ORF1ab/nsp31333S1333CAgtTgt11AY.40.000002
ORF1ab/nsp31333S1333SagTagC11AY.430.000004
ORF1ab/nsp31333S1333del1Agt-gt11AY.430.000004
ORF1ab/nsp31333S1333del1AGt-At11AY.440.000006
ORF1ab/nsp31333S1333RAgTCgC11AY.440.000006
ORF1ab/nsp31333S1333delAGT---11AY.440.000006
ORF1ab/nsp31333S1333SagTagC11AY.440.000006
ORF1ab/nsp31333S1333IaGtaTt11AY.440.000006
ORF1ab/nsp31333S1333NaGtaAt11AY.440.000006
ORF1ab/nsp31333S1333NaGtaAt11AY.450.000122
ORF1ab/nsp31333S1333IaGtaTt11AY.460.000104
ORF1ab/nsp31333S1333delAGT---11AY.46.20.000635
ORF1ab/nsp31333S1333GAgtGgt11AY.46.40.000165
ORF1ab/nsp31333S1333IaGtaTt11AY.46.60.000072
ORF1ab/nsp31333S1333CAgtTgt11AY.46.60.000072
ORF1ab/nsp31333S1333FAGtTTt11AY.46.60.000072
ORF1ab/nsp31333S1333AAGtGCt11AY.470.000031
ORF1ab/nsp31333S1333GAgtGgt11AY.470.000031
ORF1ab/nsp31333S1333GAgtGgt11AY.510.000909
ORF1ab/nsp31333S1333GAgtGgt11AY.520.000814
ORF1ab/nsp31333S1333GAgtGgt11AY.540.000095
ORF1ab/nsp31333S1333delAGT---11AY.60.000041
ORF1ab/nsp31333S1333delAGT---11AY.600.000938
ORF1ab/nsp31333S1333GAgtGgt11AY.680.000274
ORF1ab/nsp31333S1333GAgtGgt11AY.690.000187
ORF1ab/nsp31333S1333delAGT---11AY.70.000196
ORF1ab/nsp31333S1333IaGtaTt11AY.7.10.000113
ORF1ab/nsp31333S1333NaGtaAt11AY.700.000209
ORF1ab/nsp31333S1333delAGT---11AY.720.001361
ORF1ab/nsp31333S1333GAgtGgt11AY.740.000116
ORF1ab/nsp31333S1333delAGT---11AY.750.000056
ORF1ab/nsp31333S1333IaGtaTt11AY.750.000056
ORF1ab/nsp31333S1333RagTagA11AY.75.10.00018
ORF1ab/nsp31333S1333GAgtGgt11AY.75.10.00018
ORF1ab/nsp31333S1333YAGtTAt11AY.840.000437
ORF1ab/nsp31333S1333TaGtaCt11AY.850.000427
ORF1ab/nsp31333S1333delAGT---11AY.90.000068
ORF1ab/nsp31333S1333del1Agt-gt11AY.9.20.000037
ORF1ab/nsp31333S1333GAgtGgt11AY.98.10.000048
ORF1ab/nsp31333S1333GAgtGgt11AY.990.001049
ORF1ab/nsp31333S1333YAGtTAt11AY.990.001049
ORF1ab/nsp31333S1333delAGT---11AY.99.10.001553
ORF1ab/nsp31333S1333IaGtaTt11B0.000128
ORF1ab/nsp31333S1333SagTagC11B0.000128
ORF1ab/nsp31333S1333RAgtCgt11B.10.000009
ORF1ab/nsp31333S1333NaGtaAt11B.1.10.000018
ORF1ab/nsp31333S1333GAgtGgt11B.1.10.000018
ORF1ab/nsp31333S1333SagTagC11B.1.10.000018
ORF1ab/nsp31333S1333RagTagG11B.1.10.000018
ORF1ab/nsp31333S1333GAgtGgt11B.1.1.10.000327
ORF1ab/nsp31333S1333RagTagA11B.1.1.100.001115
ORF1ab/nsp31333S1333NaGtaAt11B.1.1.1570.000913
ORF1ab/nsp31333S1333GAgtGgt11B.1.1.1920.002309
ORF1ab/nsp31333S1333IaGtaTt11B.1.1.2510.007937
ORF1ab/nsp31333S1333IaGtaTt11B.1.1.280.000311
ORF1ab/nsp31333S1333IaGtaTt11B.1.1.3070.002532
ORF1ab/nsp31333S1333delAGT---11B.1.1.3110.000358
ORF1ab/nsp31333S1333delAGT---11B.1.1.3120.001912
ORF1ab/nsp31333S1333delAGT---11B.1.1.3480.000796
ORF1ab/nsp31333S1333delAGT---11B.1.1.370.000193
ORF1ab/nsp31333S1333delAGT---11B.1.1.4090.002833
ORF1ab/nsp31333S1333TaGtaCt11B.1.1.4870.005587
ORF1ab/nsp31333S1333CAgtTgt11B.1.1.70.000001
ORF1ab/nsp31333S1333TaGtaCt11B.1.1.70.000001
ORF1ab/nsp31333S1333GAgtGgt11B.1.1.700.000341
ORF1ab/nsp31333S1333GAgtGgt11B.1.1.830.00271
ORF1ab/nsp31333S1333delAGT---11B.1.1600.000031
ORF1ab/nsp31333S1333NaGtaAt11B.1.160.260.002421
ORF1ab/nsp31333S1333GAgtGgt11B.1.1690.014925
ORF1ab/nsp31333S1333IaGtaTt11B.1.1770.000013
ORF1ab/nsp31333S1333NaGtaAt11B.1.1770.000013
ORF1ab/nsp31333S1333delAGT---11B.1.177.150.000631
ORF1ab/nsp31333S1333delAGT---11B.1.177.170.000821
ORF1ab/nsp31333S1333delAGT---11B.1.177.180.00116
ORF1ab/nsp31333S1333delAGT---11B.1.177.560.000668
ORF1ab/nsp31333S1333delAGT---11B.1.177.580.001332
ORF1ab/nsp31333S1333delAGT---11B.1.177.60.000977
ORF1ab/nsp31333S1333delAGT---11B.1.177.690.001484
ORF1ab/nsp31333S1333delAGT---11B.1.177.70.000165
ORF1ab/nsp31333S1333delAGT---11B.1.177.810.000189
ORF1ab/nsp31333S1333GAgtGgt11B.1.177.860.000183
ORF1ab/nsp31333S1333GAgtGgt11B.1.1790.003759
ORF1ab/nsp31333S1333NaGtaAt11B.1.20.000009
ORF1ab/nsp31333S1333del1Agt-gt11B.1.20.000009
ORF1ab/nsp31333S1333delAGT---11B.1.20.000009
ORF1ab/nsp31333S1333delAGT---11B.1.2100.002132
ORF1ab/nsp31333S1333NaGtaAt11B.1.2210.000071
ORF1ab/nsp31333S1333CAgtTgt11B.1.2210.000071
ORF1ab/nsp31333S1333IaGtaTt11B.1.2410.000812
ORF1ab/nsp31333S1333IaGtaTt11B.1.2430.00007
ORF1ab/nsp31333S1333delAGT---11B.1.258.100.011364
ORF1ab/nsp31333S1333SagTagC11B.1.3290.000608
ORF1ab/nsp31333S1333IaGtaTt11B.1.360.000146
ORF1ab/nsp31333S1333GAgtGgt11B.1.360.000146
ORF1ab/nsp31333S1333IaGtaTt11B.1.36.290.000517
ORF1ab/nsp31333S1333IaGtaTt11B.1.3620.001541
ORF1ab/nsp31333S1333IaGtaTt11B.1.3670.000792
ORF1ab/nsp31333S1333SagTagC11B.1.4220.000812
ORF1ab/nsp31333S1333NaGtaAt11B.1.4270.00005
ORF1ab/nsp31333S1333GAgtGgt11B.1.438.10.000107
ORF1ab/nsp31333S1333NaGtaAt11B.1.4700.001404
ORF1ab/nsp31333S1333GAgtGgt11B.1.4970.000315
ORF1ab/nsp31333S1333GAgtGgt11B.1.5050.004386
ORF1ab/nsp31333S1333RagTagG11B.1.5260.000024
ORF1ab/nsp31333S1333GAgtGgt11B.1.5260.000024
ORF1ab/nsp31333S1333IaGtaTt11B.1.5260.000024
ORF1ab/nsp31333S1333CAgtTgt11B.1.5610.000397
ORF1ab/nsp31333S1333SagTagC11B.1.5760.000907
ORF1ab/nsp31333S1333NaGtaAt11B.1.5820.000491
ORF1ab/nsp31333S1333IaGtaTt11B.1.5960.000087
ORF1ab/nsp31333S1333NaGtaAt11B.1.5960.000087
ORF1ab/nsp31333S1333GAgtGgt11B.1.6050.005952
ORF1ab/nsp31333S1333GAgtGgt11B.1.617.10.000129
ORF1ab/nsp31333S1333KaGTaAG11B.1.617.20.000004
ORF1ab/nsp31333S1333RagTagA11B.1.617.20.000004
ORF1ab/nsp31333S1333del1Agt-gt11B.1.617.20.000004
ORF1ab/nsp31333S1333YAGtTAt11B.1.617.20.000004
ORF1ab/nsp31333S1333delAGT---11B.1.6210.000089
ORF1ab/nsp31333S1333IaGtaTt11B.1.6270.00202
ORF1ab/nsp31333S1333delAGT---11B.1.6300.005236
ORF1ab/nsp31333S1333GAgtGgt11B.550.00295
ORF1ab/nsp31333S1333GAgtGgt11C.36.30.000567
ORF1ab/nsp31333S1333CAgtTgt11D.20.000075
ORF1ab/nsp31333S1333IaGtaTt11D.20.000075
ORF1ab/nsp31333S1333delAGT---11P.10.000016
ORF1ab/nsp31333S1333IaGtaTt11P.10.000016
ORF1ab/nsp31333S1333delAGT---11P.1.150.000232
ORF1ab/nsp31333S1333CAgtTgt11P.20.000187
ORF1ab/nsp31333S1333SagTagC11Q.10.000126
ORF1ab/nsp31333S1333GAgtGgt11R.10.00009
ORF1ab/nsp31333S1333delAGT---11U.30.003861

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.