CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1326 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31326P1326HP2144HnonsyncCtcAt14614616695-6697

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31326P1326HcCtcAt146146All0.000028
ORF1ab/nsp31326P1326HcCtcAt1818B.1.1.70.000016
ORF1ab/nsp31326P1326HcCtcAt1717AY.250.000102
ORF1ab/nsp31326P1326HcCtcAt1515AY.540.00143
ORF1ab/nsp31326P1326HcCtcAt1010B.1.564.10.015773
ORF1ab/nsp31326P1326HcCtcAt1010B.1.617.20.000038
ORF1ab/nsp31326P1326HcCtcAt77AY.40.000011
ORF1ab/nsp31326P1326HcCtcAt77AY.440.000043
ORF1ab/nsp31326P1326HcCtcAt77B.1.177.350.004838
ORF1ab/nsp31326P1326HcCtcAt66AY.1060.002009
ORF1ab/nsp31326P1326HcCtcAt66AY.430.000027
ORF1ab/nsp31326P1326HcCtcAt66B.1.1770.000079
ORF1ab/nsp31326P1326HcCtcAt44AY.1110.000733
ORF1ab/nsp31326P1326HcCtcAt44AY.30.00004
ORF1ab/nsp31326P1326HcCtcAt33AY.140.000264
ORF1ab/nsp31326P1326HcCtcAt33AY.98.10.000145
ORF1ab/nsp31326P1326HcCtcAt22AY.1020.000053
ORF1ab/nsp31326P1326HcCtcAt22AY.1030.000012
ORF1ab/nsp31326P1326HcCtcAt22AY.290.000032
ORF1ab/nsp31326P1326HcCtcAt22B.10.000018
ORF1ab/nsp31326P1326HcCtcAt22B.1.4290.000047
ORF1ab/nsp31326P1326HcCtcAt11AV.10.005051
ORF1ab/nsp31326P1326HcCtcAt11AY.1000.000046
ORF1ab/nsp31326P1326HcCtcAt11AY.39.10.00004
ORF1ab/nsp31326P1326HcCtcAt11AY.4.20.000022
ORF1ab/nsp31326P1326HcCtcAt11AY.46.10.001027
ORF1ab/nsp31326P1326HcCtcAt11B.1.1.2220.000204
ORF1ab/nsp31326P1326HcCtcAt11B.1.1.280.000311
ORF1ab/nsp31326P1326HcCtcAt11B.1.1.4340.000349
ORF1ab/nsp31326P1326HcCtcAt11B.1.1600.000031
ORF1ab/nsp31326P1326HcCtcAt11B.1.177.560.000668
ORF1ab/nsp31326P1326HcCtcAt11B.1.177.70.000165
ORF1ab/nsp31326P1326HcCtcAt11B.1.20.000009
ORF1ab/nsp31326P1326HcCtcAt11B.1.2210.000071