CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1326 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31326P1326SP2144SnonsynCctTct112511200.9955566695-6697

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31326P1326SCctTct11201125All0.000214
ORF1ab/nsp31326P1326SCctTct209210B.1.1.70.000187
ORF1ab/nsp31326P1326SCctTct193193AY.430.000855
ORF1ab/nsp31326P1326SCctTct153153AY.40.000238
ORF1ab/nsp31326P1326SCctTct9090B.1.177.90.11984
ORF1ab/nsp31326P1326SCctTct6969AY.4.20.001497
ORF1ab/nsp31326P1326SCctTct5959B.1.20.00052
ORF1ab/nsp31326P1326SCctTct4343AY.440.000262
ORF1ab/nsp31326P1326SCctTct3840B.1.617.20.000143
ORF1ab/nsp31326P1326SCctTct1515B.1.177.770.010893
ORF1ab/nsp31326P1326SCctTct1414AY.390.000346
ORF1ab/nsp31326P1326SCctTct1414B.10.000128
ORF1ab/nsp31326P1326SCctTct1212AY.1020.000318
ORF1ab/nsp31326P1326SCctTct1212AY.1030.000075
ORF1ab/nsp31326P1326SCctTct1212C.370.001393
ORF1ab/nsp31326P1326SCctTct99B.1.1.370.001736
ORF1ab/nsp31326P1326SCctTct88AY.1160.002294
ORF1ab/nsp31326P1326SCctTct88AY.370.002528
ORF1ab/nsp31326P1326SCctTct88AY.470.000249
ORF1ab/nsp31326P1326SCctTct88AY.690.001493
ORF1ab/nsp31326P1326SCctTct88B.1.10.000145
ORF1ab/nsp31326P1326SCctTct88B.1.1.5190.000318
ORF1ab/nsp31326P1326SCctTct77AY.30.00007
ORF1ab/nsp31326P1326SCctTct66AY.1190.000212
ORF1ab/nsp31326P1326SCctTct66B0.000767
ORF1ab/nsp31326P1326SCctTct55AY.230.000349
ORF1ab/nsp31326P1326SCctTct55B.1.258.170.00052
ORF1ab/nsp31326P1326SCctTct55P.10.000079
ORF1ab/nsp31326P1326SCctTct44AY.360.000593
ORF1ab/nsp31326P1326SCctTct44B.1.1.1530.004381
ORF1ab/nsp31326P1326SCctTct33AY.1170.000254
ORF1ab/nsp31326P1326SCctTct33AY.200.000117
ORF1ab/nsp31326P1326SCctTct33AY.250.000018
ORF1ab/nsp31326P1326SCctTct33AY.550.002752
ORF1ab/nsp31326P1326SCctTct33B.1.1600.000094
ORF1ab/nsp31326P1326SCctTct33B.1.360.000438
ORF1ab/nsp31326P1326SCctTct33B.1.5410.013274
ORF1ab/nsp31326P1326SCctTct33B.1.6370.000219
ORF1ab/nsp31326P1326SCctTct120.055556
ORF1ab/nsp31326P1326SCctTct22A.2.50.000998
ORF1ab/nsp31326P1326SCctTct22AY.1040.003968
ORF1ab/nsp31326P1326SCctTct22AY.1060.00067
ORF1ab/nsp31326P1326SCctTct22AY.290.000032
ORF1ab/nsp31326P1326SCctTct22AY.590.001059
ORF1ab/nsp31326P1326SCctTct22AY.60.000082
ORF1ab/nsp31326P1326SCctTct22B.1.1.10.000653
ORF1ab/nsp31326P1326SCctTct22B.1.2210.000142
ORF1ab/nsp31326P1326SCctTct22B.1.4290.000047
ORF1ab/nsp31326P1326SCctTct22B.1.5400.019417
ORF1ab/nsp31326P1326SCctTct22B.1.5960.000174
ORF1ab/nsp31326P1326SCctTct11A.210.00277
ORF1ab/nsp31326P1326SCctTct11AY.1000.000046
ORF1ab/nsp31326P1326SCctTct11AY.1050.000643
ORF1ab/nsp31326P1326SCctTct11AY.1180.000063
ORF1ab/nsp31326P1326SCctTct11AY.16.10.00047
ORF1ab/nsp31326P1326SCctTct11AY.270.000065
ORF1ab/nsp31326P1326SCctTct11AY.39.10.00004
ORF1ab/nsp31326P1326SCctTct11AY.4.30.000842
ORF1ab/nsp31326P1326SCctTct11AY.460.000104
ORF1ab/nsp31326P1326SCctTct11AY.50.000021
ORF1ab/nsp31326P1326SCctTct11AY.740.000116
ORF1ab/nsp31326P1326SCctTct11AY.750.000056
ORF1ab/nsp31326P1326SCctTct11AY.9.10.000084
ORF1ab/nsp31326P1326SCctTct11AY.99.20.000092
ORF1ab/nsp31326P1326SCctTct11AZ.20.000821
ORF1ab/nsp31326P1326SCctTct11B.1.1.1740.003378
ORF1ab/nsp31326P1326SCctTct11B.1.1.2140.000055
ORF1ab/nsp31326P1326SCctTct11B.1.1.270.00565
ORF1ab/nsp31326P1326SCctTct11B.1.1.3180.000302
ORF1ab/nsp31326P1326SCctTct11B.1.1.4340.000349
ORF1ab/nsp31326P1326SCctTct11B.1.1.630.000386
ORF1ab/nsp31326P1326SCctTct11B.1.1770.000013
ORF1ab/nsp31326P1326SCctTct11B.1.177.420.000894
ORF1ab/nsp31326P1326SCctTct11B.1.177.750.001041
ORF1ab/nsp31326P1326SCctTct11B.1.2060.000816
ORF1ab/nsp31326P1326SCctTct11B.1.2400.000216
ORF1ab/nsp31326P1326SCctTct11B.1.2430.00007
ORF1ab/nsp31326P1326SCctTct11B.1.2580.000067
ORF1ab/nsp31326P1326SCctTct11B.1.3510.00003
ORF1ab/nsp31326P1326SCctTct11B.1.36.290.000517
ORF1ab/nsp31326P1326SCctTct11B.1.3950.007042
ORF1ab/nsp31326P1326SCctTct11B.1.4530.003236
ORF1ab/nsp31326P1326SCctTct11B.1.4560.003268
ORF1ab/nsp31326P1326SCctTct11B.1.5250.000113
ORF1ab/nsp31326P1326SCctTct11B.1.5260.000024
ORF1ab/nsp31326P1326SCctTct11B.1.5600.00463
ORF1ab/nsp31326P1326SCctTct11B.1.621.10.000506
ORF1ab/nsp31326P1326SCctTct11P.1.140.000048
ORF1ab/nsp31326P1326SCctTct11P.20.000187
ORF1ab/nsp31326P1326SCctTct11Q.10.000126
ORF1ab/nsp31326P1326SCctTct11Q.40.000455