CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1311 & Codon = Tct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31311A1311SA2129SnonsynGctTct808016650-6652

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31311A1311SGctTct8080All0.000015
ORF1ab/nsp31311A1311SGctTct2222B.1.1.70.00002
ORF1ab/nsp31311A1311SGctTct1010AY.40.000016
ORF1ab/nsp31311A1311SGctTct88AY.98.10.000387
ORF1ab/nsp31311A1311SGctTct44AY.30.00004
ORF1ab/nsp31311A1311SGctTct44B.1.1.370.000771
ORF1ab/nsp31311A1311SGctTct44B.1.20.000035
ORF1ab/nsp31311A1311SGctTct33AY.1180.000188
ORF1ab/nsp31311A1311SGctTct33B.1.1770.00004
ORF1ab/nsp31311A1311SGctTct33B.1.617.20.000011
ORF1ab/nsp31311A1311SGctTct22AY.1200.000074
ORF1ab/nsp31311A1311SGctTct22AY.200.000078
ORF1ab/nsp31311A1311SGctTct22B.10.000018
ORF1ab/nsp31311A1311SGctTct11AY.250.000006
ORF1ab/nsp31311A1311SGctTct11AY.290.000016
ORF1ab/nsp31311A1311SGctTct11AY.4.50.000107
ORF1ab/nsp31311A1311SGctTct11AY.440.000006
ORF1ab/nsp31311A1311SGctTct11AY.7.20.000559
ORF1ab/nsp31311A1311SGctTct11AY.75.10.00018
ORF1ab/nsp31311A1311SGctTct11AY.920.000287
ORF1ab/nsp31311A1311SGctTct11B.1.10.000018
ORF1ab/nsp31311A1311SGctTct11B.1.177.150.000631
ORF1ab/nsp31311A1311SGctTct11B.1.3960.000706
ORF1ab/nsp31311A1311SGctTct11D.20.000075
ORF1ab/nsp31311A1311SGctTct11Q.10.000126
ORF1ab/nsp31311A1311SGctTct11Q.80.000165