CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1307 & Codon = cGt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31307H1307RH2125RnonsyncAtcGt19319316638-6640

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31307H1307RcAtcGt193193All0.000037
ORF1ab/nsp31307H1307RcAtcGt5050AY.1170.004226
ORF1ab/nsp31307H1307RcAtcGt2929B.1.1.70.000026
ORF1ab/nsp31307H1307RcAtcGt2828AY.430.000124
ORF1ab/nsp31307H1307RcAtcGt1010B.10.000092
ORF1ab/nsp31307H1307RcAtcGt88AY.1030.00005
ORF1ab/nsp31307H1307RcAtcGt77AY.830.012069
ORF1ab/nsp31307H1307RcAtcGt77B.1.20.000062
ORF1ab/nsp31307H1307RcAtcGt66B.1.10.000109
ORF1ab/nsp31307H1307RcAtcGt55AY.40.000008
ORF1ab/nsp31307H1307RcAtcGt44B.1.4290.000094
ORF1ab/nsp31307H1307RcAtcGt33AY.250.000018
ORF1ab/nsp31307H1307RcAtcGt33AY.30.00003
ORF1ab/nsp31307H1307RcAtcGt33AY.9.10.000251
ORF1ab/nsp31307H1307RcAtcGt33Q.10.000379
ORF1ab/nsp31307H1307RcAtcGt22AP.10.003003
ORF1ab/nsp31307H1307RcAtcGt22AY.260.000057
ORF1ab/nsp31307H1307RcAtcGt22AY.460.000208
ORF1ab/nsp31307H1307RcAtcGt22AY.50.000041
ORF1ab/nsp31307H1307RcAtcGt22AY.9.20.000073
ORF1ab/nsp31307H1307RcAtcGt22B.1.1040.00738
ORF1ab/nsp31307H1307RcAtcGt11A.10.000282
ORF1ab/nsp31307H1307RcAtcGt11AY.1180.000063
ORF1ab/nsp31307H1307RcAtcGt11AY.270.000065
ORF1ab/nsp31307H1307RcAtcGt11AY.290.000016
ORF1ab/nsp31307H1307RcAtcGt11AY.3.10.000085
ORF1ab/nsp31307H1307RcAtcGt11AY.4.40.000409
ORF1ab/nsp31307H1307RcAtcGt11AY.750.000056
ORF1ab/nsp31307H1307RcAtcGt11AY.880.000884
ORF1ab/nsp31307H1307RcAtcGt11AZ.10.000867
ORF1ab/nsp31307H1307RcAtcGt11B.1.177.90.001332
ORF1ab/nsp31307H1307RcAtcGt11B.1.3510.00003
ORF1ab/nsp31307H1307RcAtcGt11B.1.466.20.000391
ORF1ab/nsp31307H1307RcAtcGt11B.1.5250.000113
ORF1ab/nsp31307H1307RcAtcGt11C.370.000116
ORF1ab/nsp31307H1307RcAtcGt11P.10.000016