CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1306 & Codon = aAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31306T1306NT2124NnonsynaCtaAt1901890.9947376635-6637

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31306T1306NaCtaAt189190All0.000036
ORF1ab/nsp31306T1306NaCtaAt4242AY.40.000065
ORF1ab/nsp31306T1306NaCtaAt3838B.1.1.70.000034
ORF1ab/nsp31306T1306NaCtaAt2424AY.250.000144
ORF1ab/nsp31306T1306NaCtaAt1515B.1.1.5190.000596
ORF1ab/nsp31306T1306NaCtaAt88AY.50.000165
ORF1ab/nsp31306T1306NaCtaAt88B.1.3510.000238
ORF1ab/nsp31306T1306NaCtaAt66AY.4.20.00013
ORF1ab/nsp31306T1306NaCtaAt55AY.290.000079
ORF1ab/nsp31306T1306NaCtaAt55AY.30.00005
ORF1ab/nsp31306T1306NaCtaAt55B.1.617.20.000019
ORF1ab/nsp31306T1306NaCtaAt44B.10.000037
ORF1ab/nsp31306T1306NaCtaAt120.055556
ORF1ab/nsp31306T1306NaCtaAt22AY.1030.000012
ORF1ab/nsp31306T1306NaCtaAt22AY.260.000057
ORF1ab/nsp31306T1306NaCtaAt22AY.440.000012
ORF1ab/nsp31306T1306NaCtaAt22AY.560.00321
ORF1ab/nsp31306T1306NaCtaAt22B.1.5560.015038
ORF1ab/nsp31306T1306NaCtaAt11A.2.40.003367
ORF1ab/nsp31306T1306NaCtaAt11AY.1020.000027
ORF1ab/nsp31306T1306NaCtaAt11AY.1170.000085
ORF1ab/nsp31306T1306NaCtaAt11AY.430.000004
ORF1ab/nsp31306T1306NaCtaAt11AY.610.000105
ORF1ab/nsp31306T1306NaCtaAt11AY.9.10.000084
ORF1ab/nsp31306T1306NaCtaAt11B.1.10.000018
ORF1ab/nsp31306T1306NaCtaAt11B.1.1.3170.000412
ORF1ab/nsp31306T1306NaCtaAt11B.1.1.370.000193
ORF1ab/nsp31306T1306NaCtaAt11B.1.177.100.000878
ORF1ab/nsp31306T1306NaCtaAt11B.1.177.150.000631
ORF1ab/nsp31306T1306NaCtaAt11B.1.177.210.000076
ORF1ab/nsp31306T1306NaCtaAt11B.1.2650.001271
ORF1ab/nsp31306T1306NaCtaAt11B.1.3110.000275
ORF1ab/nsp31306T1306NaCtaAt11B.1.3990.001934
ORF1ab/nsp31306T1306NaCtaAt11B.1.4270.00005
ORF1ab/nsp31306T1306NaCtaAt11B.1.438.10.000107
ORF1ab/nsp31306T1306NaCtaAt11B.1.5510.00129