CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1298

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31298V1298VV2116VsyngtAgtG1154641154420.9998096611-6613
ORF1ab/nsp31298V1298VV2116VsyngtAgtT115464180.0001558936611-6613
ORF1ab/nsp31298V1298VV2116VsyngtAgtC11546440.00003464286611-6613
ORF1ab/nsp31298V1298AV2116AnonsyngTagCa104010360.9961546611-6613
ORF1ab/nsp31298V1298AV2116AnonsyngTAgCG104040.003846156611-6613
ORF1ab/nsp31298V1298LV2116LnonsynGtaTta4564400.9649126611-6613
ORF1ab/nsp31298V1298LV2116LnonsynGtaCta456100.02192986611-6613
ORF1ab/nsp31298V1298LV2116LnonsynGtATtG45650.01096496611-6613
ORF1ab/nsp31298V1298LV2116LnonsynGtACtC45610.002192986611-6613
ORF1ab/nsp31298V1298delV2116deldelGTA---33733716611-6613
ORF1ab/nsp31298V1298IV2116InonsynGtaAta878716611-6613
ORF1ab/nsp31298V1298MV2116MnonsynGtAAtG8816611-6613
ORF1ab/nsp31298V1298del2V2116del2delgTAg--750.7142866611-6613
ORF1ab/nsp31298V1298del2V2116del2delGTa--a720.2857146611-6613
ORF1ab/nsp31298V1298TV2116TnonsynGTaACa640.6666676611-6613
ORF1ab/nsp31298V1298TV2116TnonsynGTAACC620.3333336611-6613
ORF1ab/nsp31298V1298del1V2116del1delGta-ta430.756611-6613
ORF1ab/nsp31298V1298del1V2116del1delgtAgt-410.256611-6613
ORF1ab/nsp31298V1298GV2116GnonsyngTagGa3316611-6613
ORF1ab/nsp31298V1298EV2116EnonsyngTagAa320.6666676611-6613
ORF1ab/nsp31298V1298EV2116EnonsyngTAgAG310.3333336611-6613
ORF1ab/nsp31298V1298SV2116SnonsynGTaTCa2216611-6613
ORF1ab/nsp31298V1298XV2116XnonsynGTATAG210.56611-6613
ORF1ab/nsp31298V1298XV2116XnonsynGTaTAa210.56611-6613
ORF1ab/nsp31298V1298FV2116FnonsynGtATtC1116611-6613

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31298V1298VgtAgtG115442115464All0.02208
ORF1ab/nsp31298V1298VgtAgtT18115464All0.000003
ORF1ab/nsp31298V1298VgtAgtC4115464All0.000001
ORF1ab/nsp31298V1298VgtAgtG6271262716P.10.987964
ORF1ab/nsp31298V1298VgtAgtT462716P.10.000063
ORF1ab/nsp31298V1298VgtAgtG2085120852P.1.140.996702
ORF1ab/nsp31298V1298VgtAgtT120852P.1.140.000048
ORF1ab/nsp31298V1298VgtAgtG61076107P.1.170.987868
ORF1ab/nsp31298V1298VgtAgtG42444246P.1.150.986059
ORF1ab/nsp31298V1298VgtAgtT24246P.1.150.000465
ORF1ab/nsp31298V1298VgtAgtG36763676P.1.100.990569
ORF1ab/nsp31298V1298VgtAgtG30973100P.1.70.988825
ORF1ab/nsp31298V1298VgtAgtT33100P.1.70.000958
ORF1ab/nsp31298V1298VgtAgtG29962996P.1.10.951715
ORF1ab/nsp31298V1298VgtAgtG26332633P.1.160.985036
ORF1ab/nsp31298V1298VgtAgtG19221922P.1.120.9303
ORF1ab/nsp31298V1298VgtAgtG11421142P.1.17.10.999125
ORF1ab/nsp31298V1298VgtAgtG11011101P.1.130.989218
ORF1ab/nsp31298V1298AgTagCa10361040All0.000198
ORF1ab/nsp31298V1298AgTAgCG41040All0.000001
ORF1ab/nsp31298V1298VgtAgtG10231023P.1.40.999023
ORF1ab/nsp31298V1298AgTagCa866866B.1.4360.890947
ORF1ab/nsp31298V1298VgtAgtG861861P.1.20.995376
ORF1ab/nsp31298V1298VgtAgtG509509P.1.60.990272
ORF1ab/nsp31298V1298LGtaTta440456All0.000084
ORF1ab/nsp31298V1298LGtaCta10456All0.000002
ORF1ab/nsp31298V1298LGtATtG5456All0.000001
ORF1ab/nsp31298V1298LGtACtC1456All0
ORF1ab/nsp31298V1298delGTA---337337All0.000064
ORF1ab/nsp31298V1298VgtAgtG293295AY.40.000456
ORF1ab/nsp31298V1298VgtAgtT1295AY.40.000002
ORF1ab/nsp31298V1298VgtAgtC1295AY.40.000002
ORF1ab/nsp31298V1298VgtAgtG209209P.1.81
ORF1ab/nsp31298V1298VgtAgtG207207P.1.90.995192
ORF1ab/nsp31298V1298VgtAgtG180180B.1.4290.004235
ORF1ab/nsp31298V1298VgtAgtG173173B.10.001585
ORF1ab/nsp31298V1298VgtAgtG173173B.1.10.003138
ORF1ab/nsp31298V1298delGTA---161161B.1.1.70.000144
ORF1ab/nsp31298V1298LGtaTta133133B.1.5090.115152
ORF1ab/nsp31298V1298VgtAgtG121121P.1.10.10.98374
ORF1ab/nsp31298V1298VgtAgtG115115C.360.104736
ORF1ab/nsp31298V1298VgtAgtG99100B.1.1.70.000089
ORF1ab/nsp31298V1298VgtAgtC1100B.1.1.70.000001
ORF1ab/nsp31298V1298VgtAgtG9898P.1.111
ORF1ab/nsp31298V1298VgtAgtG9393B.1.1.280.028945
ORF1ab/nsp31298V1298IGtaAta8787All0.000017
ORF1ab/nsp31298V1298LGtaTta8286B.1.1.70.000073
ORF1ab/nsp31298V1298LGtaCta486B.1.1.70.000004
ORF1ab/nsp31298V1298VgtAgtG8181AY.250.000487
ORF1ab/nsp31298V1298AgTagCa5757B.1.1.70.000051
ORF1ab/nsp31298V1298delGTA---5252AY.40.000081
ORF1ab/nsp31298V1298VgtAgtG4546B.1.617.20.000169
ORF1ab/nsp31298V1298VgtAgtT146B.1.617.20.000004
ORF1ab/nsp31298V1298VgtAgtG4343AY.440.000262
ORF1ab/nsp31298V1298LGtaTta3536B.1.617.20.000132
ORF1ab/nsp31298V1298LGtaCta136B.1.617.20.000004
ORF1ab/nsp31298V1298LGtaTta3535AY.250.000211
ORF1ab/nsp31298V1298VgtAgtG3333B.1.1.5280.158654
ORF1ab/nsp31298V1298VgtAgtG3333B.1.177.860.006054
ORF1ab/nsp31298V1298VgtAgtG3333C.370.00383
ORF1ab/nsp31298V1298VgtAgtG3030AY.46.60.002166
ORF1ab/nsp31298V1298VgtAgtG2929P.1.31
ORF1ab/nsp31298V1298AgTagCa2828B.10.000256
ORF1ab/nsp31298V1298VgtAgtG2626AY.230.001813
ORF1ab/nsp31298V1298IGtaAta2424B.1.1600.000749
ORF1ab/nsp31298V1298VgtAgtG2424B.1.1770.000316
ORF1ab/nsp31298V1298VgtAgtG2424P.1.10.21
ORF1ab/nsp31298V1298VgtAgtG2323AY.1030.000143
ORF1ab/nsp31298V1298VgtAgtG2323AY.750.001289
ORF1ab/nsp31298V1298AgTagCa2323B.1.5960.002004
ORF1ab/nsp31298V1298VgtAgtG2121AY.430.000093
ORF1ab/nsp31298V1298LGtaTta2020B.1.10.000363
ORF1ab/nsp31298V1298delGTA---1818B.1.1770.000237
ORF1ab/nsp31298V1298LGtaTta1717B.1.20.00015
ORF1ab/nsp31298V1298VgtAgtG1515AY.30.000149
ORF1ab/nsp31298V1298LGtaTta1313AY.1070.006058
ORF1ab/nsp31298V1298VgtAgtG1313B.1.4270.000656
ORF1ab/nsp31298V1298VgtAgtG1313P.1.51
ORF1ab/nsp31298V1298VgtAgtG1212AY.200.000466
ORF1ab/nsp31298V1298VgtAgtG1212B.1.1.5190.000477
ORF1ab/nsp31298V1298VgtAgtG1212B.1.5170.005124
ORF1ab/nsp31298V1298VgtAgtG1111AY.1020.000292
ORF1ab/nsp31298V1298IGtaAta1111B.1.1.70.00001
ORF1ab/nsp31298V1298LGtaTta1010B.10.000092
ORF1ab/nsp31298V1298IGtaAta1010B.10.000092
ORF1ab/nsp31298V1298delGTA---1010B.1.617.20.000038
ORF1ab/nsp31298V1298VgtAgtG99AY.1200.000335
ORF1ab/nsp31298V1298VgtAgtG99AY.4.2.10.001341
ORF1ab/nsp31298V1298delGTA---99AY.430.00004
ORF1ab/nsp31298V1298LGtaTta99B.1.1.2850.058824
ORF1ab/nsp31298V1298MGtAAtG88All0.000002
ORF1ab/nsp31298V1298delGTA---88AY.250.000048
ORF1ab/nsp31298V1298VgtAgtG88B.1.3490.005718
ORF1ab/nsp31298V1298VgtAgtG77A.2.50.003493
ORF1ab/nsp31298V1298del2gTAg--57All0.000001
ORF1ab/nsp31298V1298del2GTa--a27All0
ORF1ab/nsp31298V1298VgtAgtG77AY.390.000173
ORF1ab/nsp31298V1298LGtaTta77AY.40.000011
ORF1ab/nsp31298V1298delGTA---77AY.4.50.000752
ORF1ab/nsp31298V1298LGtaTta77B.1.1770.000092
ORF1ab/nsp31298V1298AgTagCa77B.1.20.000062
ORF1ab/nsp31298V1298VgtAgtG77B.1.5260.000165
ORF1ab/nsp31298V1298TGTaACa46All0.000001
ORF1ab/nsp31298V1298TGTAACC26All0
ORF1ab/nsp31298V1298LGtaTta56AY.430.000022
ORF1ab/nsp31298V1298LGtaCta16AY.430.000004
ORF1ab/nsp31298V1298AgTagCa66AY.440.000037
ORF1ab/nsp31298V1298LGtaTta66B.1.1600.000187
ORF1ab/nsp31298V1298VgtAgtG66B.1.20.000053
ORF1ab/nsp31298V1298VgtAgtG66B.1.5960.000523
ORF1ab/nsp31298V1298MGtAAtG66P.10.000095
ORF1ab/nsp31298V1298LGtaTta55AY.1030.000031
ORF1ab/nsp31298V1298VgtAgtG55AY.270.000324
ORF1ab/nsp31298V1298IGtaAta55AY.430.000022
ORF1ab/nsp31298V1298VgtAgtG55AY.470.000156
ORF1ab/nsp31298V1298VgtAgtG55AY.75.10.000902
ORF1ab/nsp31298V1298VgtAgtG55B0.000639
ORF1ab/nsp31298V1298AgTagCa55B.1.1110.005875
ORF1ab/nsp31298V1298TGTaACa240.111111
ORF1ab/nsp31298V1298TGTAACC240.111111
ORF1ab/nsp31298V1298del1Gta-ta34All0.000001
ORF1ab/nsp31298V1298del1gtAgt-14All0
ORF1ab/nsp31298V1298LGtaTta44AY.1100.000451
ORF1ab/nsp31298V1298VgtAgtG44AY.1180.000251
ORF1ab/nsp31298V1298IGtaAta44AY.250.000024
ORF1ab/nsp31298V1298AgTagCa44AY.40.000006
ORF1ab/nsp31298V1298LGtaTta34AY.440.000018
ORF1ab/nsp31298V1298LGtaCta14AY.440.000006
ORF1ab/nsp31298V1298VgtAgtG44AY.920.001149
ORF1ab/nsp31298V1298VgtAgtG44AY.99.20.000369
ORF1ab/nsp31298V1298delGTA---44B.10.000037
ORF1ab/nsp31298V1298delGTA---44B.1.10.000073
ORF1ab/nsp31298V1298VgtAgtG44B.1.1.3720.002755
ORF1ab/nsp31298V1298VgtAgtG44B.1.2800.028571
ORF1ab/nsp31298V1298delGTA---44B.1.5970.018519
ORF1ab/nsp31298V1298VgtAgtG44B.1.6230.002146
ORF1ab/nsp31298V1298VgtAgtG44C.37.10.010471
ORF1ab/nsp31298V1298VgtAgtG44P.20.000747
ORF1ab/nsp31298V1298GgTagGa33All0.000001
ORF1ab/nsp31298V1298EgTagAa23All0
ORF1ab/nsp31298V1298EgTAgAG13All0
ORF1ab/nsp31298V1298LGtaTta33AY.1210.000406
ORF1ab/nsp31298V1298VgtAgtG33AY.290.000047
ORF1ab/nsp31298V1298VgtAgtG33AY.340.000291
ORF1ab/nsp31298V1298IGtaAta33AY.40.000005
ORF1ab/nsp31298V1298IGtaAta33AY.440.000018
ORF1ab/nsp31298V1298VgtAgtG33AY.530.000863
ORF1ab/nsp31298V1298VgtAgtG33AY.610.000314
ORF1ab/nsp31298V1298VgtAgtG33AY.770.003382
ORF1ab/nsp31298V1298VgtAgtG33AY.980.000237
ORF1ab/nsp31298V1298IGtaAta33B.1.10.000054
ORF1ab/nsp31298V1298LGtaTta33B.1.1.2160.002671
ORF1ab/nsp31298V1298AgTagCa33B.1.1.4640.004418
ORF1ab/nsp31298V1298del2gTAg--23B.1.1.70.000002
ORF1ab/nsp31298V1298del2GTa--a13B.1.1.70.000001
ORF1ab/nsp31298V1298VgtAgtG33B.1.1600.000094
ORF1ab/nsp31298V1298VgtAgtG33B.1.177.150.001893
ORF1ab/nsp31298V1298LGtaTta33B.1.177.650.001996
ORF1ab/nsp31298V1298VgtAgtG33B.1.177.70.000495
ORF1ab/nsp31298V1298VgtAgtG33B.1.177.770.002179
ORF1ab/nsp31298V1298VgtAgtG33B.1.3510.000089
ORF1ab/nsp31298V1298VgtAgtG33B.1.360.000438
ORF1ab/nsp31298V1298LGtaTta33B.1.36.170.001482
ORF1ab/nsp31298V1298LGtaTta33B.1.36.290.001552
ORF1ab/nsp31298V1298VgtAgtG33B.1.6090.001438
ORF1ab/nsp31298V1298AgTagCa33B.1.617.20.000011
ORF1ab/nsp31298V1298AgTAgCG33P.10.000047
ORF1ab/nsp31298V1298LGtATtG33P.10.000047
ORF1ab/nsp31298V1298delGTA---220.111111
ORF1ab/nsp31298V1298XGTATAG120.055556
ORF1ab/nsp31298V1298LGtATtG120.055556
ORF1ab/nsp31298V1298XGTaTAa120.055556
ORF1ab/nsp31298V1298EgTAgAG120.055556
ORF1ab/nsp31298V1298LGtaTta120.055556
ORF1ab/nsp31298V1298EgTagAa120.055556
ORF1ab/nsp31298V1298SGTaTCa22All0
ORF1ab/nsp31298V1298XGTaTAa12All0
ORF1ab/nsp31298V1298XGTATAG12All0
ORF1ab/nsp31298V1298delGTA---22AY.140.000176
ORF1ab/nsp31298V1298VgtAgtG22AY.160.000759
ORF1ab/nsp31298V1298AgTagCa22AY.390.000049
ORF1ab/nsp31298V1298LGtaTta22AY.4.50.000215
ORF1ab/nsp31298V1298AgTagCa22AY.430.000009
ORF1ab/nsp31298V1298AgTagCa22AY.470.000062
ORF1ab/nsp31298V1298delGTA---22AY.50.000041
ORF1ab/nsp31298V1298IGtaAta22AY.60.000082
ORF1ab/nsp31298V1298delGTA---22AY.75.10.000361
ORF1ab/nsp31298V1298VgtAgtG22AY.9.20.000073
ORF1ab/nsp31298V1298AgTagCa22AY.98.10.000097
ORF1ab/nsp31298V1298GgTagGa22B.10.000018
ORF1ab/nsp31298V1298AgTagCa22B.1.10.000036
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.10.000653
ORF1ab/nsp31298V1298IGtaAta22B.1.1.2160.001781
ORF1ab/nsp31298V1298IGtaAta22B.1.1.2220.000408
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.2220.000408
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.2770.001517
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.390.001019
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.3970.004505
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.4090.005666
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.4200.002012
ORF1ab/nsp31298V1298IGtaAta22B.1.1.4340.000697
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.4590.030769
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.5070.017391
ORF1ab/nsp31298V1298VgtAgtG22B.1.1.540.006042
ORF1ab/nsp31298V1298TGTaACa22B.1.1.70.000002
ORF1ab/nsp31298V1298del1gtAgt-12B.1.1.70.000001
ORF1ab/nsp31298V1298del1Gta-ta12B.1.1.70.000001
ORF1ab/nsp31298V1298VgtAgtG22B.1.1260.002551
ORF1ab/nsp31298V1298delGTA---22B.1.177.40.000422
ORF1ab/nsp31298V1298delGTA---22B.1.177.70.00033
ORF1ab/nsp31298V1298delGTA---22B.1.177.870.001456
ORF1ab/nsp31298V1298delGTA---22B.1.2430.000139
ORF1ab/nsp31298V1298VgtAgtG22B.1.3110.000549
ORF1ab/nsp31298V1298VgtAgtG22B.1.3240.00321
ORF1ab/nsp31298V1298delGTA---22B.1.36.170.000988
ORF1ab/nsp31298V1298IGtaAta22B.1.4290.000047
ORF1ab/nsp31298V1298AgTagCa22B.1.5800.00813
ORF1ab/nsp31298V1298LGtaTta22B.1.5950.000522
ORF1ab/nsp31298V1298IGtaAta22B.1.617.20.000008
ORF1ab/nsp31298V1298VgtAgtG22B.1.6210.000177
ORF1ab/nsp31298V1298VgtAgtG22B.1.6360.013423
ORF1ab/nsp31298V1298VgtAgtG22B.30.001661
ORF1ab/nsp31298V1298VgtAgtG22P.40.007605
ORF1ab/nsp31298V1298VgtAgtG110.055556
ORF1ab/nsp31298V1298LGtaCta11A.2.20.001689
ORF1ab/nsp31298V1298EgTagAa11A.2.40.003367
ORF1ab/nsp31298V1298del2GTa--a11AD.20.000219
ORF1ab/nsp31298V1298FGtATtC11All0
ORF1ab/nsp31298V1298IGtaAta11AY.10.000396
ORF1ab/nsp31298V1298VgtAgtG11AY.1000.000046
ORF1ab/nsp31298V1298del1Gta-ta11AY.1000.000046
ORF1ab/nsp31298V1298AgTagCa11AY.1020.000027
ORF1ab/nsp31298V1298AgTagCa11AY.1030.000006
ORF1ab/nsp31298V1298IGtaAta11AY.1030.000006
ORF1ab/nsp31298V1298VgtAgtG11AY.1050.000643
ORF1ab/nsp31298V1298VgtAgtG11AY.1070.000466
ORF1ab/nsp31298V1298VgtAgtG11AY.1130.000142
ORF1ab/nsp31298V1298VgtAgtG11AY.1140.000231
ORF1ab/nsp31298V1298VgtAgtG11AY.1170.000085
ORF1ab/nsp31298V1298AgTagCa11AY.1180.000063
ORF1ab/nsp31298V1298LGtACtC11AY.1190.000035
ORF1ab/nsp31298V1298delGTA---11AY.120.000316
ORF1ab/nsp31298V1298delGTA---11AY.1200.000037
ORF1ab/nsp31298V1298VgtAgtG11AY.1210.000135
ORF1ab/nsp31298V1298AgTagCa11AY.130.000161
ORF1ab/nsp31298V1298VgtAgtG11AY.140.000088
ORF1ab/nsp31298V1298LGtaTta11AY.150.002222
ORF1ab/nsp31298V1298delGTA---11AY.190.00114
ORF1ab/nsp31298V1298VgtAgtG11AY.20.000356
ORF1ab/nsp31298V1298LGtaTta11AY.200.000039
ORF1ab/nsp31298V1298AgTagCa11AY.200.000039
ORF1ab/nsp31298V1298AgTagCa11AY.230.00007
ORF1ab/nsp31298V1298AgTagCa11AY.250.000006
ORF1ab/nsp31298V1298AgTagCa11AY.260.000028
ORF1ab/nsp31298V1298VgtAgtG11AY.260.000028
ORF1ab/nsp31298V1298LGtaTta11AY.260.000028
ORF1ab/nsp31298V1298VgtAgtG11AY.29.10.000221
ORF1ab/nsp31298V1298AgTagCa11AY.30.00001
ORF1ab/nsp31298V1298delGTA---11AY.30.00001
ORF1ab/nsp31298V1298VgtAgtG11AY.3.10.000085
ORF1ab/nsp31298V1298VgtAgtG11AY.330.000067
ORF1ab/nsp31298V1298VgtAgtG11AY.370.000316
ORF1ab/nsp31298V1298LGtaTta11AY.370.000316
ORF1ab/nsp31298V1298LGtaTta11AY.390.000025
ORF1ab/nsp31298V1298delGTA---11AY.390.000025
ORF1ab/nsp31298V1298VgtAgtG11AY.39.20.001541
ORF1ab/nsp31298V1298del1Gta-ta11AY.40.000002
ORF1ab/nsp31298V1298VgtAgtG11AY.4.20.000022
ORF1ab/nsp31298V1298MGtAAtG11AY.430.000004
ORF1ab/nsp31298V1298VgtAgtG11AY.450.000122
ORF1ab/nsp31298V1298VgtAgtG11AY.460.000104
ORF1ab/nsp31298V1298LGtaTta11AY.460.000104
ORF1ab/nsp31298V1298delGTA---11AY.46.20.000635
ORF1ab/nsp31298V1298IGtaAta11AY.46.30.000934
ORF1ab/nsp31298V1298AgTagCa11AY.46.40.000165
ORF1ab/nsp31298V1298LGtaTta11AY.470.000031
ORF1ab/nsp31298V1298IGtaAta11AY.470.000031
ORF1ab/nsp31298V1298VgtAgtG11AY.50.000021
ORF1ab/nsp31298V1298VgtAgtG11AY.5.40.000277
ORF1ab/nsp31298V1298VgtAgtG11AY.520.000814
ORF1ab/nsp31298V1298del2gTAg--11AY.520.000814
ORF1ab/nsp31298V1298AgTagCa11AY.540.000095
ORF1ab/nsp31298V1298LGtaTta11AY.590.00053
ORF1ab/nsp31298V1298VgtAgtG11AY.60.000041
ORF1ab/nsp31298V1298delGTA---11AY.60.000041
ORF1ab/nsp31298V1298delGTA---11AY.600.000938
ORF1ab/nsp31298V1298VgtAgtG11AY.650.000533
ORF1ab/nsp31298V1298LGtaTta11AY.650.000533
ORF1ab/nsp31298V1298AgTagCa11AY.70.000196
ORF1ab/nsp31298V1298LGtaTta11AY.7.10.000113
ORF1ab/nsp31298V1298VgtAgtG11AY.720.001361
ORF1ab/nsp31298V1298AgTagCa11AY.75.10.00018
ORF1ab/nsp31298V1298VgtAgtG11AY.790.001211
ORF1ab/nsp31298V1298delGTA---11AY.840.000437
ORF1ab/nsp31298V1298delGTA---11AY.90.000068
ORF1ab/nsp31298V1298LGtaTta11AY.9.20.000037
ORF1ab/nsp31298V1298LGtaTta11AY.920.000287
ORF1ab/nsp31298V1298VgtAgtG11AY.950.000761
ORF1ab/nsp31298V1298delGTA---11AY.990.001049
ORF1ab/nsp31298V1298SGTaTCa11B.10.000009
ORF1ab/nsp31298V1298MGtAAtG11B.10.000009
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.1610.003534
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.1980.001468
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.2200.001859
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.2360.006897
ORF1ab/nsp31298V1298LGtaCta11B.1.1.2360.006897
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.2650.003155
ORF1ab/nsp31298V1298VgtAgtT11B.1.1.2750.011236
ORF1ab/nsp31298V1298IGtaAta11B.1.1.3020.002075
ORF1ab/nsp31298V1298AgTagCa11B.1.1.3060.000438
ORF1ab/nsp31298V1298delGTA---11B.1.1.3110.000358
ORF1ab/nsp31298V1298delGTA---11B.1.1.3120.001912
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.3270.1
ORF1ab/nsp31298V1298delGTA---11B.1.1.3480.000796
ORF1ab/nsp31298V1298VgtAgtT11B.1.1.3630.005988
ORF1ab/nsp31298V1298VgtAgtC11B.1.1.370.000193
ORF1ab/nsp31298V1298delGTA---11B.1.1.370.000193
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.3780.007299
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.4020.011111
ORF1ab/nsp31298V1298delGTA---11B.1.1.4090.002833
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.4160.000905
ORF1ab/nsp31298V1298VgtAgtT11B.1.1.470.005348
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.5230.001563
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.630.000386
ORF1ab/nsp31298V1298GgTagGa11B.1.1.70.000001
ORF1ab/nsp31298V1298FGtATtC11B.1.1.70.000001
ORF1ab/nsp31298V1298VgtAgtG11B.1.1.990.02381
ORF1ab/nsp31298V1298VgtAgtG11B.1.1110.001175
ORF1ab/nsp31298V1298LGtaTta11B.1.1460.004237
ORF1ab/nsp31298V1298delGTA---11B.1.1600.000031
ORF1ab/nsp31298V1298VgtAgtG11B.1.1700.00431
ORF1ab/nsp31298V1298delGTA---11B.1.177.110.001698
ORF1ab/nsp31298V1298delGTA---11B.1.177.150.000631
ORF1ab/nsp31298V1298delGTA---11B.1.177.170.000821
ORF1ab/nsp31298V1298VgtAgtT11B.1.177.170.000821
ORF1ab/nsp31298V1298LGtaCta11B.1.177.430.001477
ORF1ab/nsp31298V1298delGTA---11B.1.177.510.004566
ORF1ab/nsp31298V1298delGTA---11B.1.177.560.000668
ORF1ab/nsp31298V1298delGTA---11B.1.177.570.000281
ORF1ab/nsp31298V1298delGTA---11B.1.177.580.001332
ORF1ab/nsp31298V1298delGTA---11B.1.177.60.000977
ORF1ab/nsp31298V1298delGTA---11B.1.177.600.000218
ORF1ab/nsp31298V1298LGtaTta11B.1.177.730.000566
ORF1ab/nsp31298V1298delGTA---11B.1.177.90.001332
ORF1ab/nsp31298V1298IGtaAta11B.1.20.000009
ORF1ab/nsp31298V1298VgtAgtG11B.1.2140.003663
ORF1ab/nsp31298V1298delGTA---11B.1.2210.000071
ORF1ab/nsp31298V1298LGtaTta11B.1.2210.000071
ORF1ab/nsp31298V1298IGtaAta11B.1.2210.000071
ORF1ab/nsp31298V1298LGtaTta11B.1.2230.002778
ORF1ab/nsp31298V1298LGtaTta11B.1.2400.000216
ORF1ab/nsp31298V1298LGtaTta11B.1.2430.00007
ORF1ab/nsp31298V1298AgTagCa11B.1.2430.00007
ORF1ab/nsp31298V1298delGTA---11B.1.2580.000067
ORF1ab/nsp31298V1298delGTA---11B.1.258.100.011364
ORF1ab/nsp31298V1298delGTA---11B.1.258.110.000396
ORF1ab/nsp31298V1298VgtAgtG11B.1.258.110.000396
ORF1ab/nsp31298V1298VgtAgtG11B.1.258.140.00098
ORF1ab/nsp31298V1298VgtAgtG11B.1.258.170.000104
ORF1ab/nsp31298V1298VgtAgtG11B.1.258.30.001675
ORF1ab/nsp31298V1298LGtaTta11B.1.3490.000715
ORF1ab/nsp31298V1298IGtaAta11B.1.3510.00003
ORF1ab/nsp31298V1298LGtaTta11B.1.351.30.000876
ORF1ab/nsp31298V1298IGtaAta11B.1.3560.001727
ORF1ab/nsp31298V1298AgTagCa11B.1.360.000146
ORF1ab/nsp31298V1298delGTA---11B.1.36.180.00042
ORF1ab/nsp31298V1298VgtAgtG11B.1.36.290.000517
ORF1ab/nsp31298V1298VgtAgtC11B.1.36.80.001
ORF1ab/nsp31298V1298IGtaAta11B.1.3690.000285
ORF1ab/nsp31298V1298VgtAgtG11B.1.3750.00082
ORF1ab/nsp31298V1298VgtAgtG11B.1.3960.000706
ORF1ab/nsp31298V1298VgtAgtG11B.1.3990.001934
ORF1ab/nsp31298V1298LGtaTta11B.1.4040.001302
ORF1ab/nsp31298V1298delGTA---11B.1.4090.000781
ORF1ab/nsp31298V1298LGtaTta11B.1.4160.001269
ORF1ab/nsp31298V1298AgTagCa11B.1.4290.000024
ORF1ab/nsp31298V1298VgtAgtG11B.1.4410.009615
ORF1ab/nsp31298V1298AgTagCa11B.1.4590.004082
ORF1ab/nsp31298V1298VgtAgtG11B.1.466.20.000391
ORF1ab/nsp31298V1298VgtAgtG11B.1.5230.002451
ORF1ab/nsp31298V1298LGtaTta11B.1.5260.000024
ORF1ab/nsp31298V1298AgTagCa11B.1.5330.009615
ORF1ab/nsp31298V1298del2gTAg--11B.1.5440.006024
ORF1ab/nsp31298V1298VgtAgtT11B.1.5740.002151
ORF1ab/nsp31298V1298del2gTAg--11B.1.5800.004065
ORF1ab/nsp31298V1298VgtAgtT11B.1.5820.000491
ORF1ab/nsp31298V1298LGtaTta11B.1.5820.000491
ORF1ab/nsp31298V1298SGTaTCa11B.1.5950.000261
ORF1ab/nsp31298V1298AgTagCa11B.1.5950.000261
ORF1ab/nsp31298V1298LGtaTta11B.1.5960.000087
ORF1ab/nsp31298V1298VgtAgtG11B.1.617.10.000129
ORF1ab/nsp31298V1298delGTA---11B.1.617.30.002985
ORF1ab/nsp31298V1298VgtAgtG11B.1.6200.000946
ORF1ab/nsp31298V1298delGTA---11B.1.6210.000089
ORF1ab/nsp31298V1298delGTA---11B.1.6300.005236
ORF1ab/nsp31298V1298AgTagCa11B.1.6340.003425
ORF1ab/nsp31298V1298VgtAgtG11B.1.6370.000073
ORF1ab/nsp31298V1298VgtAgtG11B.1.910.002075
ORF1ab/nsp31298V1298delGTA---11B.340.013699
ORF1ab/nsp31298V1298AgTagCa11B.4.10.018868
ORF1ab/nsp31298V1298IGtaAta11C.160.00106
ORF1ab/nsp31298V1298VgtAgtG11C.170.055556
ORF1ab/nsp31298V1298VgtAgtG11C.350.000774
ORF1ab/nsp31298V1298LGtaTta11C.36.30.000567
ORF1ab/nsp31298V1298LGtaTta11C.370.000116
ORF1ab/nsp31298V1298VgtAgtG11C.390.018868
ORF1ab/nsp31298V1298LGtaTta11D.20.000075
ORF1ab/nsp31298V1298VgtAgtG11D.20.000075
ORF1ab/nsp31298V1298delGTA---11P.10.000016
ORF1ab/nsp31298V1298LGtATtG11P.1.140.000048
ORF1ab/nsp31298V1298delGTA---11P.1.150.000232
ORF1ab/nsp31298V1298AgTAgCG11P.1.170.000162
ORF1ab/nsp31298V1298LGtaTta11P.20.000187
ORF1ab/nsp31298V1298delGTA---11Q.10.000126
ORF1ab/nsp31298V1298VgtAgtG11Q.20.000613
ORF1ab/nsp31298V1298delGTA---11Q.40.000455
ORF1ab/nsp31298V1298IGtaAta11R.10.00009
ORF1ab/nsp31298V1298VgtAgtG11U.30.003861
ORF1ab/nsp31298V1298delGTA---11U.30.003861