CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1288 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31288T1288delT2106deldelACT---30930916581-6583

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31288T1288delACT---309309All0.000059
ORF1ab/nsp31288T1288delACT---127127B.1.1.70.000114
ORF1ab/nsp31288T1288delACT---4040AY.260.001132
ORF1ab/nsp31288T1288delACT---1919B.1.1770.00025
ORF1ab/nsp31288T1288delACT---1515AY.40.000023
ORF1ab/nsp31288T1288delACT---88AY.4.50.00086
ORF1ab/nsp31288T1288delACT---77AY.430.000031
ORF1ab/nsp31288T1288delACT---77B.1.617.20.000026
ORF1ab/nsp31288T1288delACT---44B.1.10.000073
ORF1ab/nsp31288T1288delACT---33B.10.000027
ORF1ab/nsp31288T1288delACT---33B.1.1.10.00098
ORF1ab/nsp31288T1288delACT---33B.1.177.70.000495
ORF1ab/nsp31288T1288delACT---33B.1.36.170.001482
ORF1ab/nsp31288T1288delACT---22AY.190.002281
ORF1ab/nsp31288T1288delACT---22AY.250.000012
ORF1ab/nsp31288T1288delACT---22AY.50.000041
ORF1ab/nsp31288T1288delACT---22AY.75.10.000361
ORF1ab/nsp31288T1288delACT---22AY.90.000135
ORF1ab/nsp31288T1288delACT---22B.1.1.370.000386
ORF1ab/nsp31288T1288delACT---22B.1.1600.000062
ORF1ab/nsp31288T1288delACT---22B.1.177.40.000422
ORF1ab/nsp31288T1288delACT---11AD.20.000219
ORF1ab/nsp31288T1288delACT---11AY.1130.000142
ORF1ab/nsp31288T1288delACT---11AY.120.000316
ORF1ab/nsp31288T1288delACT---11AY.1200.000037
ORF1ab/nsp31288T1288delACT---11AY.440.000006
ORF1ab/nsp31288T1288delACT---11AY.46.20.000635
ORF1ab/nsp31288T1288delACT---11AY.470.000031
ORF1ab/nsp31288T1288delACT---11AY.590.00053
ORF1ab/nsp31288T1288delACT---11AY.60.000041
ORF1ab/nsp31288T1288delACT---11AY.600.000938
ORF1ab/nsp31288T1288delACT---11AY.840.000437
ORF1ab/nsp31288T1288delACT---11B.1.1.2210.010101
ORF1ab/nsp31288T1288delACT---11B.1.1.2580.003257
ORF1ab/nsp31288T1288delACT---11B.1.1.3110.000358
ORF1ab/nsp31288T1288delACT---11B.1.1.3120.001912
ORF1ab/nsp31288T1288delACT---11B.1.1.3480.000796
ORF1ab/nsp31288T1288delACT---11B.1.1.3610.045455
ORF1ab/nsp31288T1288delACT---11B.1.1.390.00051
ORF1ab/nsp31288T1288delACT---11B.1.1.4090.002833
ORF1ab/nsp31288T1288delACT---11B.1.1.440.00241
ORF1ab/nsp31288T1288delACT---11B.1.1.700.000341
ORF1ab/nsp31288T1288delACT---11B.1.177.110.001698
ORF1ab/nsp31288T1288delACT---11B.1.177.150.000631
ORF1ab/nsp31288T1288delACT---11B.1.177.160.000664
ORF1ab/nsp31288T1288delACT---11B.1.177.170.000821
ORF1ab/nsp31288T1288delACT---11B.1.177.510.004566
ORF1ab/nsp31288T1288delACT---11B.1.177.520.001757
ORF1ab/nsp31288T1288delACT---11B.1.177.560.000668
ORF1ab/nsp31288T1288delACT---11B.1.177.600.000218
ORF1ab/nsp31288T1288delACT---11B.1.177.870.000728
ORF1ab/nsp31288T1288delACT---11B.1.177.90.001332
ORF1ab/nsp31288T1288delACT---11B.1.20.000009
ORF1ab/nsp31288T1288delACT---11B.1.2210.000071
ORF1ab/nsp31288T1288delACT---11B.1.221.10.002907
ORF1ab/nsp31288T1288delACT---11B.1.2580.000067
ORF1ab/nsp31288T1288delACT---11B.1.258.100.011364
ORF1ab/nsp31288T1288delACT---11B.1.2790.000514
ORF1ab/nsp31288T1288delACT---11B.1.3400.004292
ORF1ab/nsp31288T1288delACT---11B.1.3490.000715
ORF1ab/nsp31288T1288delACT---11B.1.36.180.00042
ORF1ab/nsp31288T1288delACT---11B.1.36.390.002217
ORF1ab/nsp31288T1288delACT---11B.1.3890.001002
ORF1ab/nsp31288T1288delACT---11B.1.4090.000781
ORF1ab/nsp31288T1288delACT---11B.1.5260.000024
ORF1ab/nsp31288T1288delACT---11B.1.5850.027778
ORF1ab/nsp31288T1288delACT---11B.1.5880.00091
ORF1ab/nsp31288T1288delACT---11B.1.617.30.002985
ORF1ab/nsp31288T1288delACT---11B.1.6210.000089
ORF1ab/nsp31288T1288delACT---11B.1.6300.005236
ORF1ab/nsp31288T1288delACT---11B.340.013699
ORF1ab/nsp31288T1288delACT---11P.10.000016
ORF1ab/nsp31288T1288delACT---11P.1.150.000232
ORF1ab/nsp31288T1288delACT---11Q.10.000126
ORF1ab/nsp31288T1288delACT---11U.30.003861