CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1287 & Codon = ctC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31287L1287LL2105LsynctTctC2662520.9473686578-6580

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31287L1287LctTctC252266All0.000048
ORF1ab/nsp31287L1287LctTctC8888AY.390.002175
ORF1ab/nsp31287L1287LctTctC1919AY.440.000116
ORF1ab/nsp31287L1287LctTctC1419B.1.1.70.000013
ORF1ab/nsp31287L1287LctTctC1919B.1.617.20.000072
ORF1ab/nsp31287L1287LctTctC1717AY.120.10.005457
ORF1ab/nsp31287L1287LctTctC1616B.1.20.000141
ORF1ab/nsp31287L1287LctTctC1515AY.1030.000093
ORF1ab/nsp31287L1287LctTctC1111AY.1200.000409
ORF1ab/nsp31287L1287LctTctC88B.1.1.670.03653
ORF1ab/nsp31287L1287LctTctC66B.1.1770.000079
ORF1ab/nsp31287L1287LctTctC45AY.40.000006
ORF1ab/nsp31287L1287LctTctC44AY.1210.000541
ORF1ab/nsp31287L1287LctTctC44B.10.000037
ORF1ab/nsp31287L1287LctTctC23AY.250.000012
ORF1ab/nsp31287L1287LctTctC13B.1.36.80.001
ORF1ab/nsp31287L1287LctTctC22B.1.6340.006849
ORF1ab/nsp31287L1287LctTctC22C.370.000232
ORF1ab/nsp31287L1287LctTctC11A.20.000662
ORF1ab/nsp31287L1287LctTctC11AY.1000.000046
ORF1ab/nsp31287L1287LctTctC11AY.1180.000063
ORF1ab/nsp31287L1287LctTctC11AY.140.000088
ORF1ab/nsp31287L1287LctTctC11AY.160.00038
ORF1ab/nsp31287L1287LctTctC11AY.260.000028
ORF1ab/nsp31287L1287LctTctC11AY.30.00001
ORF1ab/nsp31287L1287LctTctC11AY.4.40.000409
ORF1ab/nsp31287L1287LctTctC11AY.430.000004
ORF1ab/nsp31287L1287LctTctC11AY.46.20.000635
ORF1ab/nsp31287L1287LctTctC11AY.470.000031
ORF1ab/nsp31287L1287LctTctC11AY.60.000041
ORF1ab/nsp31287L1287LctTctC11B.1.10.000018
ORF1ab/nsp31287L1287LctTctC11B.1.1.1920.002309
ORF1ab/nsp31287L1287LctTctC11B.1.1.4860.001577
ORF1ab/nsp31287L1287LctTctC11B.1.1470.000756
ORF1ab/nsp31287L1287LctTctC11B.1.1600.000031
ORF1ab/nsp31287L1287LctTctC11B.1.360.000146
ORF1ab/nsp31287L1287LctTctC11B.1.5610.000397
ORF1ab/nsp31287L1287LctTctC11Q.30.000145