CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1287 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31287L1287HL2105HnonsyncTtcAt10110116578-6580

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31287L1287HcTtcAt101101All0.000019
ORF1ab/nsp31287L1287HcTtcAt9191AY.29.10.020066
ORF1ab/nsp31287L1287HcTtcAt55AY.60.000206
ORF1ab/nsp31287L1287HcTtcAt110.055556
ORF1ab/nsp31287L1287HcTtcAt11AY.350.000233
ORF1ab/nsp31287L1287HcTtcAt11B.1.1.330.000421
ORF1ab/nsp31287L1287HcTtcAt11B.1.1280.000635
ORF1ab/nsp31287L1287HcTtcAt11Q.80.000165