CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1287

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31287L1287PL2105PnonsyncTtcCt333733320.9985026578-6580
ORF1ab/nsp31287L1287PL2105PnonsyncTTcCC333750.001498356578-6580
ORF1ab/nsp31287L1287FL2105FnonsynCttTtt3267326716578-6580
ORF1ab/nsp31287L1287delL2105deldelCTT---30830816578-6580
ORF1ab/nsp31287L1287LL2105LsynctTctC2662520.9473686578-6580
ORF1ab/nsp31287L1287LL2105LsynctTctA26670.02631586578-6580
ORF1ab/nsp31287L1287LL2105LsynctTctG26660.02255646578-6580
ORF1ab/nsp31287L1287LL2105LsynCtTTtA26610.00375946578-6580
ORF1ab/nsp31287L1287RL2105RnonsyncTtcGt16816816578-6580
ORF1ab/nsp31287L1287HL2105HnonsyncTtcAt10110116578-6580
ORF1ab/nsp31287L1287IL2105InonsynCttAtt42400.9523816578-6580
ORF1ab/nsp31287L1287IL2105InonsynCtTAtA4220.0476196578-6580
ORF1ab/nsp31287L1287VL2105VnonsynCttGtt202016578-6580
ORF1ab/nsp31287L1287SL2105SnonsynCTtTCt4416578-6580
ORF1ab/nsp31287L1287del1L2105del1delCtt-tt430.756578-6580
ORF1ab/nsp31287L1287del2L2105del2delcTTc--420.56578-6580
ORF1ab/nsp31287L1287del1L2105del1delcTtc-t410.256578-6580
ORF1ab/nsp31287L1287del2L2105del2delCTt--t410.256578-6580
ORF1ab/nsp31287L1287del2L2105del2delCTT--C410.256578-6580
ORF1ab/nsp31287L1287NL2105NnonsynCTTAAC2216578-6580
ORF1ab/nsp31287L1287AL2105AnonsynCTtGCt1116578-6580
ORF1ab/nsp31287L1287CL2105CnonsynCTTTGC1116578-6580

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31287L1287PcTtcCt33323337All0.000637
ORF1ab/nsp31287L1287PcTTcCC53337All0.000001
ORF1ab/nsp31287L1287FCttTtt32673267All0.000625
ORF1ab/nsp31287L1287PcTtcCt31733173B.1.1.70.002841
ORF1ab/nsp31287L1287FCttTtt11141114B.1.1.70.000997
ORF1ab/nsp31287L1287FCttTtt470470AY.410.138154
ORF1ab/nsp31287L1287delCTT---308308All0.000059
ORF1ab/nsp31287L1287LctTctC252266All0.000048
ORF1ab/nsp31287L1287LctTctA7266All0.000001
ORF1ab/nsp31287L1287LctTctG6266All0.000001
ORF1ab/nsp31287L1287LCtTTtA1266All0
ORF1ab/nsp31287L1287FCttTtt231231AY.430.001023
ORF1ab/nsp31287L1287FCttTtt190190B.1.617.20.000715
ORF1ab/nsp31287L1287FCttTtt174174B.1.1.2050.64684
ORF1ab/nsp31287L1287RcTtcGt168168All0.000032
ORF1ab/nsp31287L1287FCttTtt164164AY.40.000255
ORF1ab/nsp31287L1287delCTT---128128B.1.1.70.000115
ORF1ab/nsp31287L1287RcTtcGt115115AY.40.000179
ORF1ab/nsp31287L1287HcTtcAt101101All0.000019
ORF1ab/nsp31287L1287HcTtcAt9191AY.29.10.020066
ORF1ab/nsp31287L1287LctTctC8888AY.390.002175
ORF1ab/nsp31287L1287FCttTtt8181AY.440.000493
ORF1ab/nsp31287L1287FCttTtt7979B.1.4220.064175
ORF1ab/nsp31287L1287FCttTtt6969B.10.000632
ORF1ab/nsp31287L1287FCttTtt6666AY.4.20.001431
ORF1ab/nsp31287L1287PcTtcCt4545B.1.1.5190.001787
ORF1ab/nsp31287L1287FCttTtt4343AY.30.000428
ORF1ab/nsp31287L1287ICttAtt4042All0.000008
ORF1ab/nsp31287L1287ICtTAtA242All0
ORF1ab/nsp31287L1287delCTT---4040AY.260.001132
ORF1ab/nsp31287L1287PcTtcCt3939AY.98.10.001889
ORF1ab/nsp31287L1287RcTtcGt3838AY.390.000939
ORF1ab/nsp31287L1287FCttTtt3333AY.520.026873
ORF1ab/nsp31287L1287FCttTtt3232AY.99.20.002949
ORF1ab/nsp31287L1287FCttTtt3131AY.610.003248
ORF1ab/nsp31287L1287FCttTtt2828B.1.20.000247
ORF1ab/nsp31287L1287FCttTtt2525AY.1020.000663
ORF1ab/nsp31287L1287FCttTtt2525AY.1030.000155
ORF1ab/nsp31287L1287FCttTtt2424B.1.5960.002091
ORF1ab/nsp31287L1287delCTT---2121B.1.1770.000277
ORF1ab/nsp31287L1287VCttGtt2020All0.000004
ORF1ab/nsp31287L1287FCttTtt1919AY.230.001325
ORF1ab/nsp31287L1287LctTctC1919AY.440.000116
ORF1ab/nsp31287L1287LctTctC1419B.1.1.70.000013
ORF1ab/nsp31287L1287LctTctA319B.1.1.70.000003
ORF1ab/nsp31287L1287LCtTTtA119B.1.1.70.000001
ORF1ab/nsp31287L1287LctTctG119B.1.1.70.000001
ORF1ab/nsp31287L1287LctTctC1919B.1.617.20.000072
ORF1ab/nsp31287L1287LctTctC1717AY.120.10.005457
ORF1ab/nsp31287L1287FCttTtt1616AY.1100.001803
ORF1ab/nsp31287L1287LctTctC1616B.1.20.000141
ORF1ab/nsp31287L1287FCttTtt1616P.10.000252
ORF1ab/nsp31287L1287LctTctC1515AY.1030.000093
ORF1ab/nsp31287L1287delCTT---1515AY.40.000023
ORF1ab/nsp31287L1287FCttTtt1515AY.920.004309
ORF1ab/nsp31287L1287FCttTtt1414B.1.10.000254
ORF1ab/nsp31287L1287PcTtcCt1313AY.30.000129
ORF1ab/nsp31287L1287VCttGtt1313AY.40.00002
ORF1ab/nsp31287L1287PcTtcCt1212AY.60.000494
ORF1ab/nsp31287L1287FCttTtt1212B.1.4290.000282
ORF1ab/nsp31287L1287LctTctC1111AY.1200.000409
ORF1ab/nsp31287L1287FCttTtt1111B.1.1.5190.000437
ORF1ab/nsp31287L1287FCttTtt1111B.1.1770.000145
ORF1ab/nsp31287L1287FCttTtt1010B.1.1.3120.01912
ORF1ab/nsp31287L1287FCttTtt99AY.250.000054
ORF1ab/nsp31287L1287delCTT---99AY.4.50.000967
ORF1ab/nsp31287L1287FCttTtt88AY.330.000534
ORF1ab/nsp31287L1287LctTctC88B.1.1.670.03653
ORF1ab/nsp31287L1287FCttTtt88B.1.1600.00025
ORF1ab/nsp31287L1287FCttTtt88B.1.36.220.009662
ORF1ab/nsp31287L1287FCttTtt88B.1.4620.057971
ORF1ab/nsp31287L1287RcTtcGt88B.1.617.20.00003
ORF1ab/nsp31287L1287PcTtcCt77AY.40.000011
ORF1ab/nsp31287L1287delCTT---77AY.430.000031
ORF1ab/nsp31287L1287FCttTtt77C.370.000812
ORF1ab/nsp31287L1287FCttTtt66AY.1170.000507
ORF1ab/nsp31287L1287FCttTtt66AY.390.000148
ORF1ab/nsp31287L1287ICttAtt66AY.610.000629
ORF1ab/nsp31287L1287LctTctC66B.1.1770.000079
ORF1ab/nsp31287L1287FCttTtt66B.1.5650.004862
ORF1ab/nsp31287L1287delCTT---66B.1.617.20.000023
ORF1ab/nsp31287L1287FCttTtt55AY.1200.000186
ORF1ab/nsp31287L1287FCttTtt55AY.39.10.000198
ORF1ab/nsp31287L1287LctTctC45AY.40.000006
ORF1ab/nsp31287L1287LctTctG15AY.40.000002
ORF1ab/nsp31287L1287FCttTtt55AY.470.000156
ORF1ab/nsp31287L1287HcTtcAt55AY.60.000206
ORF1ab/nsp31287L1287FCttTtt55AY.620.002179
ORF1ab/nsp31287L1287FCttTtt55B.1.2580.000333
ORF1ab/nsp31287L1287FCttTtt55B.1.258.170.00052
ORF1ab/nsp31287L1287FCttTtt55B.1.3510.000149
ORF1ab/nsp31287L1287FCttTtt55B.1.5260.000118
ORF1ab/nsp31287L1287PcTtcCt45B.1.617.20.000015
ORF1ab/nsp31287L1287PcTTcCC15B.1.617.20.000004
ORF1ab/nsp31287L1287PcTtcCt55B.1.6370.000365
ORF1ab/nsp31287L1287SCTtTCt44All0.000001
ORF1ab/nsp31287L1287del1Ctt-tt34All0.000001
ORF1ab/nsp31287L1287del2cTTc--24All0
ORF1ab/nsp31287L1287del1cTtc-t14All0
ORF1ab/nsp31287L1287del2CTT--C14All0
ORF1ab/nsp31287L1287del2CTt--t14All0
ORF1ab/nsp31287L1287RcTtcGt44AY.1000.000184
ORF1ab/nsp31287L1287LctTctC44AY.1210.000541
ORF1ab/nsp31287L1287FCttTtt44AY.290.000063
ORF1ab/nsp31287L1287PcTtcCt34AY.430.000013
ORF1ab/nsp31287L1287PcTTcCC14AY.430.000004
ORF1ab/nsp31287L1287FCttTtt44AY.50.000083
ORF1ab/nsp31287L1287FCttTtt44AY.680.001095
ORF1ab/nsp31287L1287FCttTtt44AY.98.10.000194
ORF1ab/nsp31287L1287LctTctC44B.10.000037
ORF1ab/nsp31287L1287FCttTtt44B.1.1.2200.007435
ORF1ab/nsp31287L1287ICttAtt44B.1.1.5190.000159
ORF1ab/nsp31287L1287ICttAtt44B.1.1.70.000004
ORF1ab/nsp31287L1287FCttTtt44B.1.36.170.001976
ORF1ab/nsp31287L1287FCttTtt44P.1.140.000191
ORF1ab/nsp31287L1287FCttTtt44P.20.000747
ORF1ab/nsp31287L1287FCttTtt44Q.40.001819
ORF1ab/nsp31287L1287FCttTtt33AY.1160.00086
ORF1ab/nsp31287L1287FCttTtt33AY.160.001139
ORF1ab/nsp31287L1287LctTctC23AY.250.000012
ORF1ab/nsp31287L1287LctTctG13AY.250.000006
ORF1ab/nsp31287L1287ICttAtt33AY.60.000123
ORF1ab/nsp31287L1287FCttTtt33AY.60.000123
ORF1ab/nsp31287L1287FCttTtt33AY.840.001312
ORF1ab/nsp31287L1287delCTT---33B.10.000027
ORF1ab/nsp31287L1287PcTtcCt23B.10.000018
ORF1ab/nsp31287L1287PcTTcCC13B.10.000009
ORF1ab/nsp31287L1287PcTtcCt33B.1.10.000054
ORF1ab/nsp31287L1287delCTT---33B.1.1.10.00098
ORF1ab/nsp31287L1287FCttTtt33B.1.1.2160.002671
ORF1ab/nsp31287L1287FCttTtt33B.1.1.3800.029412
ORF1ab/nsp31287L1287SCTtTCt33B.1.1.70.000003
ORF1ab/nsp31287L1287del1Ctt-tt33B.1.20.000026
ORF1ab/nsp31287L1287FCttTtt33B.1.2430.000209
ORF1ab/nsp31287L1287delCTT---33B.1.36.170.001482
ORF1ab/nsp31287L1287LctTctG23B.1.36.80.002
ORF1ab/nsp31287L1287LctTctC13B.1.36.80.001
ORF1ab/nsp31287L1287FCttTtt33B.1.617.10.000387
ORF1ab/nsp31287L1287FCttTtt33C.360.002732
ORF1ab/nsp31287L1287FCttTtt33P.1.150.000697
ORF1ab/nsp31287L1287NCTTAAC220.111111
ORF1ab/nsp31287L1287ICtTAtA220.111111
ORF1ab/nsp31287L1287NCTTAAC22All0
ORF1ab/nsp31287L1287PcTtcCt22AY.1000.000092
ORF1ab/nsp31287L1287FCttTtt22AY.1010.000981
ORF1ab/nsp31287L1287ICttAtt22AY.1030.000012
ORF1ab/nsp31287L1287PcTtcCt22AY.1110.000366
ORF1ab/nsp31287L1287FCttTtt22AY.1190.000071
ORF1ab/nsp31287L1287delCTT---22AY.190.002281
ORF1ab/nsp31287L1287FCttTtt22AY.200.000078
ORF1ab/nsp31287L1287delCTT---22AY.250.000012
ORF1ab/nsp31287L1287ICttAtt22AY.40.000003
ORF1ab/nsp31287L1287FCttTtt22AY.450.000243
ORF1ab/nsp31287L1287FCttTtt22AY.460.000208
ORF1ab/nsp31287L1287FCttTtt22AY.46.20.001271
ORF1ab/nsp31287L1287FCttTtt22AY.46.60.000144
ORF1ab/nsp31287L1287delCTT---22AY.50.000041
ORF1ab/nsp31287L1287FCttTtt22AY.5.30.000675
ORF1ab/nsp31287L1287FCttTtt22AY.70.000392
ORF1ab/nsp31287L1287delCTT---22AY.75.10.000361
ORF1ab/nsp31287L1287delCTT---22AY.90.000135
ORF1ab/nsp31287L1287FCttTtt22AY.9.20.000073
ORF1ab/nsp31287L1287delCTT---22B.1.10.000036
ORF1ab/nsp31287L1287VCttGtt22B.1.10.000036
ORF1ab/nsp31287L1287ICttAtt22B.1.1.10.000653
ORF1ab/nsp31287L1287FCttTtt22B.1.1.2840.000215
ORF1ab/nsp31287L1287ICttAtt22B.1.1.3480.001592
ORF1ab/nsp31287L1287delCTT---22B.1.1.370.000386
ORF1ab/nsp31287L1287VCttGtt22B.1.1.70.000002
ORF1ab/nsp31287L1287FCttTtt22B.1.1.700.000682
ORF1ab/nsp31287L1287delCTT---22B.1.1600.000062
ORF1ab/nsp31287L1287PcTtcCt22B.1.1770.000026
ORF1ab/nsp31287L1287delCTT---22B.1.177.40.000422
ORF1ab/nsp31287L1287FCttTtt22B.1.177.520.003515
ORF1ab/nsp31287L1287FCttTtt22B.1.177.600.000437
ORF1ab/nsp31287L1287delCTT---22B.1.177.70.00033
ORF1ab/nsp31287L1287PcTtcCt22B.1.20.000018
ORF1ab/nsp31287L1287FCttTtt22B.1.466.20.000782
ORF1ab/nsp31287L1287ICttAtt22B.1.5250.000226
ORF1ab/nsp31287L1287FCttTtt22B.1.6090.000959
ORF1ab/nsp31287L1287FCttTtt22B.1.6210.000177
ORF1ab/nsp31287L1287LctTctC22B.1.6340.006849
ORF1ab/nsp31287L1287LctTctA22C.2.10.013333
ORF1ab/nsp31287L1287LctTctC22C.370.000232
ORF1ab/nsp31287L1287LctTctA22P.10.000032
ORF1ab/nsp31287L1287PcTtcCt22Q.10.000253
ORF1ab/nsp31287L1287HcTtcAt110.055556
ORF1ab/nsp31287L1287ICttAtt11A0.000387
ORF1ab/nsp31287L1287FCttTtt11A.20.000662
ORF1ab/nsp31287L1287LctTctC11A.20.000662
ORF1ab/nsp31287L1287FCttTtt11A.23.10.000704
ORF1ab/nsp31287L1287delCTT---11AD.20.000219
ORF1ab/nsp31287L1287ACTtGCt11All0
ORF1ab/nsp31287L1287CCTTTGC11All0
ORF1ab/nsp31287L1287del1cTtc-t11AU.30.00211
ORF1ab/nsp31287L1287del2CTT--C11AY.10.000396
ORF1ab/nsp31287L1287FCttTtt11AY.1000.000046
ORF1ab/nsp31287L1287LctTctC11AY.1000.000046
ORF1ab/nsp31287L1287ICttAtt11AY.1020.000027
ORF1ab/nsp31287L1287VCttGtt11AY.1030.000006
ORF1ab/nsp31287L1287PcTTcCC11AY.1130.000142
ORF1ab/nsp31287L1287FCttTtt11AY.1130.000142
ORF1ab/nsp31287L1287delCTT---11AY.1130.000142
ORF1ab/nsp31287L1287FCttTtt11AY.1180.000063
ORF1ab/nsp31287L1287LctTctC11AY.1180.000063
ORF1ab/nsp31287L1287PcTtcCt11AY.120.000316
ORF1ab/nsp31287L1287delCTT---11AY.120.000316
ORF1ab/nsp31287L1287FCttTtt11AY.120.000316
ORF1ab/nsp31287L1287delCTT---11AY.1200.000037
ORF1ab/nsp31287L1287LctTctC11AY.140.000088
ORF1ab/nsp31287L1287LctTctC11AY.160.00038
ORF1ab/nsp31287L1287FCttTtt11AY.210.001898
ORF1ab/nsp31287L1287PcTtcCt11AY.240.000431
ORF1ab/nsp31287L1287LctTctC11AY.260.000028
ORF1ab/nsp31287L1287LctTctC11AY.30.00001
ORF1ab/nsp31287L1287ICttAtt11AY.30.00001
ORF1ab/nsp31287L1287FCttTtt11AY.3.10.000085
ORF1ab/nsp31287L1287FCttTtt11AY.300.000396
ORF1ab/nsp31287L1287HcTtcAt11AY.350.000233
ORF1ab/nsp31287L1287LctTctC11AY.4.40.000409
ORF1ab/nsp31287L1287FCttTtt11AY.4.50.000107
ORF1ab/nsp31287L1287FCttTtt11AY.420.00004
ORF1ab/nsp31287L1287LctTctC11AY.430.000004
ORF1ab/nsp31287L1287RcTtcGt11AY.430.000004
ORF1ab/nsp31287L1287VCttGtt11AY.440.000006
ORF1ab/nsp31287L1287ACTtGCt11AY.440.000006
ORF1ab/nsp31287L1287delCTT---11AY.440.000006
ORF1ab/nsp31287L1287RcTtcGt11AY.440.000006
ORF1ab/nsp31287L1287delCTT---11AY.460.000104
ORF1ab/nsp31287L1287FCttTtt11AY.46.10.001027
ORF1ab/nsp31287L1287delCTT---11AY.46.20.000635
ORF1ab/nsp31287L1287LctTctC11AY.46.20.000635
ORF1ab/nsp31287L1287FCttTtt11AY.46.40.000165
ORF1ab/nsp31287L1287ICttAtt11AY.46.60.000072
ORF1ab/nsp31287L1287delCTT---11AY.470.000031
ORF1ab/nsp31287L1287LctTctC11AY.470.000031
ORF1ab/nsp31287L1287PcTtcCt11AY.50.000021
ORF1ab/nsp31287L1287FCttTtt11AY.5.40.000277
ORF1ab/nsp31287L1287delCTT---11AY.590.00053
ORF1ab/nsp31287L1287FCttTtt11AY.590.00053
ORF1ab/nsp31287L1287LctTctC11AY.60.000041
ORF1ab/nsp31287L1287delCTT---11AY.60.000041
ORF1ab/nsp31287L1287delCTT---11AY.600.000938
ORF1ab/nsp31287L1287FCttTtt11AY.7.10.000113
ORF1ab/nsp31287L1287PcTtcCt11AY.7.20.000559
ORF1ab/nsp31287L1287FCttTtt11AY.7.20.000559
ORF1ab/nsp31287L1287PcTtcCt11AY.730.000665
ORF1ab/nsp31287L1287ICttAtt11AY.75.10.00018
ORF1ab/nsp31287L1287delCTT---11AY.840.000437
ORF1ab/nsp31287L1287PcTtcCt11AY.870.000833
ORF1ab/nsp31287L1287FCttTtt11AY.870.000833
ORF1ab/nsp31287L1287FCttTtt11AY.890.004902
ORF1ab/nsp31287L1287ICttAtt11AY.90.000068
ORF1ab/nsp31287L1287FCttTtt11AY.9.10.000084
ORF1ab/nsp31287L1287PcTtcCt11AY.9.20.000037
ORF1ab/nsp31287L1287FCttTtt11AY.930.000273
ORF1ab/nsp31287L1287FCttTtt11AY.950.000761
ORF1ab/nsp31287L1287PcTTcCC11AY.990.001049
ORF1ab/nsp31287L1287FCttTtt11AY.99.10.001553
ORF1ab/nsp31287L1287ICttAtt11B0.000128
ORF1ab/nsp31287L1287ICttAtt11B.10.000009
ORF1ab/nsp31287L1287ICttAtt11B.1.10.000018
ORF1ab/nsp31287L1287LctTctC11B.1.10.000018
ORF1ab/nsp31287L1287PcTtcCt11B.1.1.1740.003378
ORF1ab/nsp31287L1287LctTctC11B.1.1.1920.002309
ORF1ab/nsp31287L1287PcTtcCt11B.1.1.2200.001859
ORF1ab/nsp31287L1287delCTT---11B.1.1.2210.010101
ORF1ab/nsp31287L1287FCttTtt11B.1.1.2220.000204
ORF1ab/nsp31287L1287del2CTt--t11B.1.1.2790.001121
ORF1ab/nsp31287L1287FCttTtt11B.1.1.280.000311
ORF1ab/nsp31287L1287FCttTtt11B.1.1.2940.001266
ORF1ab/nsp31287L1287FCttTtt11B.1.1.3020.002075
ORF1ab/nsp31287L1287FCttTtt11B.1.1.3050.003861
ORF1ab/nsp31287L1287FCttTtt11B.1.1.3060.000438
ORF1ab/nsp31287L1287PcTtcCt11B.1.1.3060.000438
ORF1ab/nsp31287L1287delCTT---11B.1.1.3110.000358
ORF1ab/nsp31287L1287delCTT---11B.1.1.3120.001912
ORF1ab/nsp31287L1287FCttTtt11B.1.1.3180.000302
ORF1ab/nsp31287L1287HcTtcAt11B.1.1.330.000421
ORF1ab/nsp31287L1287FCttTtt11B.1.1.3480.000796
ORF1ab/nsp31287L1287delCTT---11B.1.1.3480.000796
ORF1ab/nsp31287L1287delCTT---11B.1.1.3610.045455
ORF1ab/nsp31287L1287FCttTtt11B.1.1.3720.000689
ORF1ab/nsp31287L1287FCttTtt11B.1.1.390.00051
ORF1ab/nsp31287L1287delCTT---11B.1.1.390.00051
ORF1ab/nsp31287L1287FCttTtt11B.1.1.3980.003226
ORF1ab/nsp31287L1287delCTT---11B.1.1.4090.002833
ORF1ab/nsp31287L1287FCttTtt11B.1.1.4090.002833
ORF1ab/nsp31287L1287FCttTtt11B.1.1.4320.001266
ORF1ab/nsp31287L1287FCttTtt11B.1.1.4340.000349
ORF1ab/nsp31287L1287delCTT---11B.1.1.440.00241
ORF1ab/nsp31287L1287LctTctC11B.1.1.4860.001577
ORF1ab/nsp31287L1287FCttTtt11B.1.1.5230.001563
ORF1ab/nsp31287L1287ICttAtt11B.1.1.630.000386
ORF1ab/nsp31287L1287delCTT---11B.1.1.700.000341
ORF1ab/nsp31287L1287HcTtcAt11B.1.1280.000635
ORF1ab/nsp31287L1287FCttTtt11B.1.1390.000733
ORF1ab/nsp31287L1287LctTctC11B.1.1470.000756
ORF1ab/nsp31287L1287PcTtcCt11B.1.1600.000031
ORF1ab/nsp31287L1287LctTctC11B.1.1600.000031
ORF1ab/nsp31287L1287delCTT---11B.1.177.110.001698
ORF1ab/nsp31287L1287delCTT---11B.1.177.150.000631
ORF1ab/nsp31287L1287delCTT---11B.1.177.160.000664
ORF1ab/nsp31287L1287delCTT---11B.1.177.170.000821
ORF1ab/nsp31287L1287FCttTtt11B.1.177.330.001645
ORF1ab/nsp31287L1287FCttTtt11B.1.177.40.000211
ORF1ab/nsp31287L1287delCTT---11B.1.177.510.004566
ORF1ab/nsp31287L1287delCTT---11B.1.177.520.001757
ORF1ab/nsp31287L1287delCTT---11B.1.177.560.000668
ORF1ab/nsp31287L1287delCTT---11B.1.177.600.000218
ORF1ab/nsp31287L1287delCTT---11B.1.177.630.002703
ORF1ab/nsp31287L1287del2cTTc--11B.1.177.70.000165
ORF1ab/nsp31287L1287delCTT---11B.1.177.870.000728
ORF1ab/nsp31287L1287delCTT---11B.1.177.90.001332
ORF1ab/nsp31287L1287delCTT---11B.1.20.000009
ORF1ab/nsp31287L1287SCTtTCt11B.1.20.000009
ORF1ab/nsp31287L1287PcTtcCt11B.1.2210.000071
ORF1ab/nsp31287L1287delCTT---11B.1.2210.000071
ORF1ab/nsp31287L1287FCttTtt11B.1.2210.000071
ORF1ab/nsp31287L1287delCTT---11B.1.221.10.002907
ORF1ab/nsp31287L1287FCttTtt11B.1.2340.000132
ORF1ab/nsp31287L1287delCTT---11B.1.2580.000067
ORF1ab/nsp31287L1287delCTT---11B.1.258.100.011364
ORF1ab/nsp31287L1287FCttTtt11B.1.2790.000514
ORF1ab/nsp31287L1287delCTT---11B.1.2790.000514
ORF1ab/nsp31287L1287FCttTtt11B.1.2980.002114
ORF1ab/nsp31287L1287FCttTtt11B.1.3110.000275
ORF1ab/nsp31287L1287PcTtcCt11B.1.3130.006579
ORF1ab/nsp31287L1287delCTT---11B.1.3400.004292
ORF1ab/nsp31287L1287delCTT---11B.1.3490.000715
ORF1ab/nsp31287L1287ICttAtt11B.1.351.30.000876
ORF1ab/nsp31287L1287FCttTtt11B.1.351.30.000876
ORF1ab/nsp31287L1287LctTctC11B.1.360.000146
ORF1ab/nsp31287L1287delCTT---11B.1.36.180.00042
ORF1ab/nsp31287L1287delCTT---11B.1.3890.001002
ORF1ab/nsp31287L1287VCttGtt11B.1.390.003906
ORF1ab/nsp31287L1287delCTT---11B.1.4090.000781
ORF1ab/nsp31287L1287FCttTtt11B.1.416.10.001563
ORF1ab/nsp31287L1287PcTtcCt11B.1.4220.000812
ORF1ab/nsp31287L1287FCttTtt11B.1.4270.00005
ORF1ab/nsp31287L1287LctTctG11B.1.4290.000024
ORF1ab/nsp31287L1287ICttAtt11B.1.438.10.000107
ORF1ab/nsp31287L1287PcTtcCt11B.1.4560.003268
ORF1ab/nsp31287L1287ICttAtt11B.1.4710.002732
ORF1ab/nsp31287L1287FCttTtt11B.1.4990.00105
ORF1ab/nsp31287L1287LctTctC11B.1.5610.000397
ORF1ab/nsp31287L1287FCttTtt11B.1.5810.009434
ORF1ab/nsp31287L1287delCTT---11B.1.5850.027778
ORF1ab/nsp31287L1287delCTT---11B.1.5880.00091
ORF1ab/nsp31287L1287RcTtcGt11B.1.6090.000479
ORF1ab/nsp31287L1287del2cTTc--11B.1.617.20.000004
ORF1ab/nsp31287L1287delCTT---11B.1.617.30.002985
ORF1ab/nsp31287L1287delCTT---11B.1.6210.000089
ORF1ab/nsp31287L1287delCTT---11B.1.6300.005236
ORF1ab/nsp31287L1287delCTT---11B.340.013699
ORF1ab/nsp31287L1287CCTTTGC11C.350.000774
ORF1ab/nsp31287L1287FCttTtt11D.20.000075
ORF1ab/nsp31287L1287FCttTtt11N.50.001767
ORF1ab/nsp31287L1287delCTT---11P.10.000016
ORF1ab/nsp31287L1287PcTtcCt11P.10.000016
ORF1ab/nsp31287L1287FCttTtt11P.1.120.000484
ORF1ab/nsp31287L1287delCTT---11P.1.150.000232
ORF1ab/nsp31287L1287FCttTtt11P.1.20.001156
ORF1ab/nsp31287L1287FCttTtt11P.1.80.004785
ORF1ab/nsp31287L1287FCttTtt11P.30.001595
ORF1ab/nsp31287L1287delCTT---11Q.10.000126
ORF1ab/nsp31287L1287LctTctC11Q.30.000145
ORF1ab/nsp31287L1287FCttTtt11Q.80.000165
ORF1ab/nsp31287L1287HcTtcAt11Q.80.000165
ORF1ab/nsp31287L1287delCTT---11U.30.003861