CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1285 & Codon = tAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31285S1285YS2103YnonsyntCttAt15015016572-6574

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31285S1285YtCttAt150150All0.000029
ORF1ab/nsp31285S1285YtCttAt116116AY.40.000181
ORF1ab/nsp31285S1285YtCttAt66AY.390.000148
ORF1ab/nsp31285S1285YtCttAt44B.1.1.70.000004
ORF1ab/nsp31285S1285YtCttAt33B.10.000027
ORF1ab/nsp31285S1285YtCttAt33B.1.617.20.000011
ORF1ab/nsp31285S1285YtCttAt22B.1.1.1920.004619
ORF1ab/nsp31285S1285YtCttAt22B.1.20.000018
ORF1ab/nsp31285S1285YtCttAt22P.10.000032
ORF1ab/nsp31285S1285YtCttAt11A0.000387
ORF1ab/nsp31285S1285YtCttAt11AY.350.000233
ORF1ab/nsp31285S1285YtCttAt11AY.430.000004
ORF1ab/nsp31285S1285YtCttAt11AY.5.30.000337
ORF1ab/nsp31285S1285YtCttAt11B.1.1.3170.000412
ORF1ab/nsp31285S1285YtCttAt11B.1.1.4090.002833
ORF1ab/nsp31285S1285YtCttAt11B.1.1.4480.002033
ORF1ab/nsp31285S1285YtCttAt11B.1.1.5190.00004
ORF1ab/nsp31285S1285YtCttAt11B.1.1600.000031
ORF1ab/nsp31285S1285YtCttAt11B.1.3510.00003
ORF1ab/nsp31285S1285YtCttAt11B.1.36.200.016949
ORF1ab/nsp31285S1285YtCttAt11B.1.6210.000089