CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1285

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31285S1285FS2103FnonsyntCttTt16775167740.999946572-6574
ORF1ab/nsp31285S1285FS2103FnonsyntCTtTC1677510.00005961256572-6574
ORF1ab/nsp31285S1285AS2103AnonsynTctGct1149114916572-6574
ORF1ab/nsp31285S1285delS2103deldelTCT---29129116572-6574
ORF1ab/nsp31285S1285YS2103YnonsyntCttAt15015016572-6574
ORF1ab/nsp31285S1285SS2103SsyntcTtcC1231100.8943096572-6574
ORF1ab/nsp31285S1285SS2103SsyntcTtcA12380.06504066572-6574
ORF1ab/nsp31285S1285SS2103SsyntcTtcG12350.04065046572-6574
ORF1ab/nsp31285S1285PS2103PnonsynTctCct1081070.9907416572-6574
ORF1ab/nsp31285S1285PS2103PnonsynTcTCcA10810.009259266572-6574
ORF1ab/nsp31285S1285CS2103CnonsyntCttGt43410.9534886572-6574
ORF1ab/nsp31285S1285CS2103CnonsyntCTtGC4320.04651166572-6574
ORF1ab/nsp31285S1285TS2103TnonsynTctAct18150.8333336572-6574
ORF1ab/nsp31285S1285TS2103TnonsynTcTAcC1820.1111116572-6574
ORF1ab/nsp31285S1285TS2103TnonsynTcTAcG1810.05555566572-6574
ORF1ab/nsp31285S1285del1S2103del1deltCtt-t860.756572-6574
ORF1ab/nsp31285S1285del1S2103del1deltcTtc-810.1256572-6574
ORF1ab/nsp31285S1285del1S2103del1delTct-ct810.1256572-6574
ORF1ab/nsp31285S1285VS2103VnonsynTCTGTC2216572-6574
ORF1ab/nsp31285S1285LS2103LnonsynTCTCTG1116572-6574
ORF1ab/nsp31285S1285del2S2103del2delTCt--t1116572-6574

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31285S1285FtCttTt1677416775All0.003208
ORF1ab/nsp31285S1285FtCTtTC116775All0
ORF1ab/nsp31285S1285FtCttTt45964596B.1.1.70.004114
ORF1ab/nsp31285S1285FtCttTt33113311AY.40.005153
ORF1ab/nsp31285S1285FtCttTt13351336B.1.617.20.005027
ORF1ab/nsp31285S1285FtCTtTC11336B.1.617.20.000004
ORF1ab/nsp31285S1285ATctGct11491149All0.00022
ORF1ab/nsp31285S1285ATctGct10921092B.1.1.70.000978
ORF1ab/nsp31285S1285FtCttTt815815AY.730.542249
ORF1ab/nsp31285S1285FtCttTt553553B.1.1.3260.973592
ORF1ab/nsp31285S1285FtCttTt471471AY.430.002087
ORF1ab/nsp31285S1285FtCttTt441441B.1.36.390.977827
ORF1ab/nsp31285S1285FtCttTt345345B.1.4290.008117
ORF1ab/nsp31285S1285delTCT---291291All0.000056
ORF1ab/nsp31285S1285FtCttTt243243B.1.20.00214
ORF1ab/nsp31285S1285FtCttTt239239B.10.002189
ORF1ab/nsp31285S1285FtCttTt239239B.1.6210.021156
ORF1ab/nsp31285S1285FtCttTt232232B.1.5260.005453
ORF1ab/nsp31285S1285FtCttTt226226B.1.1.2320.410163
ORF1ab/nsp31285S1285FtCttTt220220AY.1020.005833
ORF1ab/nsp31285S1285FtCttTt200200B.1.1.80.716846
ORF1ab/nsp31285S1285FtCttTt177177P.10.002788
ORF1ab/nsp31285S1285FtCttTt168168AY.440.001023
ORF1ab/nsp31285S1285FtCttTt168168B.1.1.5190.006671
ORF1ab/nsp31285S1285FtCttTt156156B.1.10.00283
ORF1ab/nsp31285S1285YtCttAt150150All0.000029
ORF1ab/nsp31285S1285FtCttTt140140AY.30.001392
ORF1ab/nsp31285S1285delTCT---126126B.1.1.70.000113
ORF1ab/nsp31285S1285StcTtcC110123All0.000021
ORF1ab/nsp31285S1285StcTtcA8123All0.000002
ORF1ab/nsp31285S1285StcTtcG5123All0.000001
ORF1ab/nsp31285S1285YtCttAt116116AY.40.000181
ORF1ab/nsp31285S1285PTctCct107108All0.00002
ORF1ab/nsp31285S1285PTcTCcA1108All0
ORF1ab/nsp31285S1285FtCttTt9898AY.1030.000608
ORF1ab/nsp31285S1285FtCttTt9393AY.250.000559
ORF1ab/nsp31285S1285FtCttTt8383B.1.1.2341
ORF1ab/nsp31285S1285FtCttTt7979AK.11
ORF1ab/nsp31285S1285FtCttTt6969B.1.1770.000909
ORF1ab/nsp31285S1285FtCttTt5959AY.750.003305
ORF1ab/nsp31285S1285FtCttTt5959B.1.3510.001754
ORF1ab/nsp31285S1285FtCttTt5656AY.390.001384
ORF1ab/nsp31285S1285StcTtcC5252AY.200.002021
ORF1ab/nsp31285S1285FtCttTt5252B.1.1.700.017735
ORF1ab/nsp31285S1285FtCttTt5050B.1.5250.005658
ORF1ab/nsp31285S1285FtCttTt5050C.370.005803
ORF1ab/nsp31285S1285FtCttTt4848Q.10.006064
ORF1ab/nsp31285S1285FtCttTt4747AY.1200.001747
ORF1ab/nsp31285S1285CtCttGt4143All0.000008
ORF1ab/nsp31285S1285CtCTtGC243All0
ORF1ab/nsp31285S1285FtCttTt4242AY.1170.00355
ORF1ab/nsp31285S1285FtCttTt4040B.1.5370.8
ORF1ab/nsp31285S1285FtCttTt4040B.1.5820.019627
ORF1ab/nsp31285S1285FtCttTt3939AY.4.20.000846
ORF1ab/nsp31285S1285FtCttTt3939B.1.1260.049745
ORF1ab/nsp31285S1285FtCttTt3636AY.260.001019
ORF1ab/nsp31285S1285FtCttTt3636N.90.214286
ORF1ab/nsp31285S1285FtCttTt3535B.1.2210.002486
ORF1ab/nsp31285S1285FtCttTt3434B.1.6370.002484
ORF1ab/nsp31285S1285FtCttTt3232AY.60.001316
ORF1ab/nsp31285S1285FtCttTt3232P.1.150.007435
ORF1ab/nsp31285S1285PTctCct3131R.10.00279
ORF1ab/nsp31285S1285FtCttTt2626B.1.1.2140.001442
ORF1ab/nsp31285S1285FtCttTt2626B.1.177.550.060606
ORF1ab/nsp31285S1285FtCttTt2525B.1.4270.001262
ORF1ab/nsp31285S1285FtCttTt2424AY.290.000379
ORF1ab/nsp31285S1285FtCttTt2323AY.200.000894
ORF1ab/nsp31285S1285FtCttTt2323B.1.1.2260.133721
ORF1ab/nsp31285S1285FtCttTt2222AK.21
ORF1ab/nsp31285S1285FtCttTt2222AY.1190.000777
ORF1ab/nsp31285S1285FtCttTt2222AY.50.000454
ORF1ab/nsp31285S1285FtCttTt2222B.1.1.3050.084942
ORF1ab/nsp31285S1285FtCttTt2121AY.1180.001316
ORF1ab/nsp31285S1285delTCT---2121B.1.1770.000277
ORF1ab/nsp31285S1285FtCttTt2020AY.610.002096
ORF1ab/nsp31285S1285TTctAct1518All0.000003
ORF1ab/nsp31285S1285TTcTAcC218All0
ORF1ab/nsp31285S1285TTcTAcG118All0
ORF1ab/nsp31285S1285FtCttTt1818AY.1000.000828
ORF1ab/nsp31285S1285FtCttTt1818AY.34.10.009179
ORF1ab/nsp31285S1285FtCttTt1717AY.1130.002421
ORF1ab/nsp31285S1285delTCT---1717AY.40.000026
ORF1ab/nsp31285S1285FtCttTt1717AY.420.000684
ORF1ab/nsp31285S1285FtCttTt1717AY.470.000529
ORF1ab/nsp31285S1285FtCttTt1717B.6.80.140496
ORF1ab/nsp31285S1285FtCttTt1616AY.98.10.000775
ORF1ab/nsp31285S1285PTctCct1515B.1.1770.000198
ORF1ab/nsp31285S1285FtCttTt1515P.1.140.000717
ORF1ab/nsp31285S1285FtCttTt1414B.1.1.280.004357
ORF1ab/nsp31285S1285FtCttTt1414B.1.1600.000437
ORF1ab/nsp31285S1285FtCttTt1414B.1.177.540.00849
ORF1ab/nsp31285S1285ATctGct1313AY.40.00002
ORF1ab/nsp31285S1285ATctGct1313AY.440.000079
ORF1ab/nsp31285S1285FtCttTt1313AY.530.003738
ORF1ab/nsp31285S1285FtCttTt1313B.1.1.2220.002652
ORF1ab/nsp31285S1285FtCttTt1313B.1.2430.000905
ORF1ab/nsp31285S1285FtCttTt1212AY.460.001249
ORF1ab/nsp31285S1285FtCttTt1212AY.7.10.001352
ORF1ab/nsp31285S1285FtCttTt1111AY.450.001339
ORF1ab/nsp31285S1285FtCttTt1111B.1.1.1760.004833
ORF1ab/nsp31285S1285CtCttGt1010AY.40.000016
ORF1ab/nsp31285S1285FtCttTt1010AY.650.00533
ORF1ab/nsp31285S1285FtCttTt1010B.1.1.1210.024272
ORF1ab/nsp31285S1285FtCttTt1010B.1.4060.060606
ORF1ab/nsp31285S1285ATctGct1010B.1.5260.000235
ORF1ab/nsp31285S1285FtCttTt1010P.1.170.001618
ORF1ab/nsp31285S1285FtCttTt1010Q.80.001649
ORF1ab/nsp31285S1285delTCT---99AY.360.001334
ORF1ab/nsp31285S1285delTCT---99AY.4.50.000967
ORF1ab/nsp31285S1285delTCT---99AY.430.00004
ORF1ab/nsp31285S1285FtCttTt99AY.75.10.001623
ORF1ab/nsp31285S1285FtCttTt99AY.840.003937
ORF1ab/nsp31285S1285FtCttTt99AY.930.002458
ORF1ab/nsp31285S1285FtCttTt99B.1.1.3180.002716
ORF1ab/nsp31285S1285PTctCct99B.1.20.000079
ORF1ab/nsp31285S1285FtCttTt99B.1.2580.000599
ORF1ab/nsp31285S1285FtCttTt99B.1.617.10.001161
ORF1ab/nsp31285S1285CtCttGt99B.1.617.20.000034
ORF1ab/nsp31285S1285del1tCtt-t68All0.000001
ORF1ab/nsp31285S1285del1tcTtc-18All0
ORF1ab/nsp31285S1285del1Tct-ct18All0
ORF1ab/nsp31285S1285FtCttTt88AY.120.10.002568
ORF1ab/nsp31285S1285FtCttTt88AY.850.003417
ORF1ab/nsp31285S1285delTCT---88B.10.000073
ORF1ab/nsp31285S1285FtCttTt88B.1.1.4160.00724
ORF1ab/nsp31285S1285TTctAct88B.1.1.70.000007
ORF1ab/nsp31285S1285FtCttTt88B.1.2340.001056
ORF1ab/nsp31285S1285FtCttTt77AY.1010.003433
ORF1ab/nsp31285S1285FtCttTt77AY.1210.000947
ORF1ab/nsp31285S1285FtCttTt77AY.230.000488
ORF1ab/nsp31285S1285FtCttTt77AY.410.002058
ORF1ab/nsp31285S1285FtCttTt77AY.700.00146
ORF1ab/nsp31285S1285FtCttTt77AY.9.10.000586
ORF1ab/nsp31285S1285FtCttTt77AY.910.005113
ORF1ab/nsp31285S1285FtCttTt77B.1.1.3930.777778
ORF1ab/nsp31285S1285FtCttTt77B.1.1.4290.032258
ORF1ab/nsp31285S1285CtCttGt77B.1.1.70.000006
ORF1ab/nsp31285S1285StcTtcC67B.1.1.70.000005
ORF1ab/nsp31285S1285PTctCct67B.1.1.70.000005
ORF1ab/nsp31285S1285StcTtcG17B.1.1.70.000001
ORF1ab/nsp31285S1285PTcTCcA17B.1.1.70.000001
ORF1ab/nsp31285S1285FtCttTt77B.1.258.170.000728
ORF1ab/nsp31285S1285FtCttTt77B.1.36.290.003621
ORF1ab/nsp31285S1285delTCT---77B.1.617.20.000026
ORF1ab/nsp31285S1285StcTtcC77C.36.30.003971
ORF1ab/nsp31285S1285FtCttTt66AY.1070.002796
ORF1ab/nsp31285S1285FtCttTt66AY.140.000528
ORF1ab/nsp31285S1285FtCttTt66AY.330.000401
ORF1ab/nsp31285S1285YtCttAt66AY.390.000148
ORF1ab/nsp31285S1285FtCttTt66AY.4.50.000645
ORF1ab/nsp31285S1285FtCttTt66AY.540.000572
ORF1ab/nsp31285S1285ATctGct66B.10.000055
ORF1ab/nsp31285S1285FtCttTt66B.1.2650.007624
ORF1ab/nsp31285S1285FtCttTt66B.1.36.170.002964
ORF1ab/nsp31285S1285FtCttTt66B.1.5700.017647
ORF1ab/nsp31285S1285FtCttTt66B.1.5960.000523
ORF1ab/nsp31285S1285FtCttTt66P.20.00112
ORF1ab/nsp31285S1285FtCttTt66Q.40.002729
ORF1ab/nsp31285S1285FtCttTt55A.2.50.002495
ORF1ab/nsp31285S1285FtCttTt55AD.20.001095
ORF1ab/nsp31285S1285FtCttTt55AY.130.000805
ORF1ab/nsp31285S1285FtCttTt55AY.160.001898
ORF1ab/nsp31285S1285FtCttTt55AY.39.10.000198
ORF1ab/nsp31285S1285FtCttTt55B.1.1.2070.00591
ORF1ab/nsp31285S1285FtCttTt55B.1.1.2250.035971
ORF1ab/nsp31285S1285FtCttTt55B.1.1.3170.002058
ORF1ab/nsp31285S1285FtCttTt55B.1.1.3980.016129
ORF1ab/nsp31285S1285FtCttTt55B.1.177.330.008224
ORF1ab/nsp31285S1285PTctCct55B.1.177.560.003338
ORF1ab/nsp31285S1285FtCttTt55B.1.36.80.005
ORF1ab/nsp31285S1285FtCttTt55R.10.00045
ORF1ab/nsp31285S1285CtCttGt44AY.1020.000106
ORF1ab/nsp31285S1285StcTtcC44AY.1070.001864
ORF1ab/nsp31285S1285FtCttTt44AY.1140.000924
ORF1ab/nsp31285S1285delTCT---44AY.260.000113
ORF1ab/nsp31285S1285FtCttTt44AY.340.000388
ORF1ab/nsp31285S1285FtCttTt44AY.360.000593
ORF1ab/nsp31285S1285StcTtcC44AY.40.000006
ORF1ab/nsp31285S1285PTctCct44AY.440.000024
ORF1ab/nsp31285S1285FtCttTt44AY.46.40.000658
ORF1ab/nsp31285S1285FtCttTt44AY.980.000316
ORF1ab/nsp31285S1285delTCT---44B.1.10.000073
ORF1ab/nsp31285S1285FtCttTt44B.1.1.2160.003562
ORF1ab/nsp31285S1285FtCttTt44B.1.1.2690.005413
ORF1ab/nsp31285S1285FtCttTt44B.1.1.3850.017857
ORF1ab/nsp31285S1285FtCttTt44B.1.1.4200.004024
ORF1ab/nsp31285S1285YtCttAt44B.1.1.70.000004
ORF1ab/nsp31285S1285FtCttTt44B.1.360.000584
ORF1ab/nsp31285S1285StcTtcC44B.1.617.20.000015
ORF1ab/nsp31285S1285FtCttTt44P.1.120.001936
ORF1ab/nsp31285S1285FtCttTt44P.1.20.004624
ORF1ab/nsp31285S1285FtCttTt44P.1.40.003906
ORF1ab/nsp31285S1285FtCttTt44P.70.017467
ORF1ab/nsp31285S1285FtCttTt44Q.30.00058
ORF1ab/nsp31285S1285FtCttTt33A.10.000846
ORF1ab/nsp31285S1285PTctCct33AY.1030.000019
ORF1ab/nsp31285S1285FtCttTt33AY.1090.002219
ORF1ab/nsp31285S1285FtCttTt33AY.1100.000338
ORF1ab/nsp31285S1285FtCttTt33AY.16.10.00141
ORF1ab/nsp31285S1285FtCttTt33AY.240.001293
ORF1ab/nsp31285S1285delTCT---33AY.250.000018
ORF1ab/nsp31285S1285PTctCct33AY.250.000018
ORF1ab/nsp31285S1285FtCttTt33AY.270.000194
ORF1ab/nsp31285S1285FtCttTt33AY.320.001597
ORF1ab/nsp31285S1285PTctCct33AY.40.000005
ORF1ab/nsp31285S1285FtCttTt33AY.4.40.001227
ORF1ab/nsp31285S1285StcTtcC23AY.430.000009
ORF1ab/nsp31285S1285StcTtcG13AY.430.000004
ORF1ab/nsp31285S1285PTctCct33AY.46.60.000217
ORF1ab/nsp31285S1285FtCttTt33AY.590.001589
ORF1ab/nsp31285S1285FtCttTt33AY.680.000821
ORF1ab/nsp31285S1285FtCttTt33AY.690.00056
ORF1ab/nsp31285S1285FtCttTt33AY.710.001425
ORF1ab/nsp31285S1285FtCttTt33AY.740.000347
ORF1ab/nsp31285S1285StcTtcC33AY.9.10.000251
ORF1ab/nsp31285S1285FtCttTt33AY.9.20.00011
ORF1ab/nsp31285S1285FtCttTt33AY.99.20.000276
ORF1ab/nsp31285S1285YtCttAt33B.10.000027
ORF1ab/nsp31285S1285StcTtcC23B.10.000018
ORF1ab/nsp31285S1285StcTtcA13B.10.000009
ORF1ab/nsp31285S1285FtCttTt33B.1.1.1150.026786
ORF1ab/nsp31285S1285FtCttTt33B.1.1.250.001706
ORF1ab/nsp31285S1285FtCttTt33B.1.1.2630.004673
ORF1ab/nsp31285S1285FtCttTt33B.1.1.3160.002775
ORF1ab/nsp31285S1285FtCttTt33B.1.1.370.000579
ORF1ab/nsp31285S1285StcTtcC33B.1.1.4200.003018
ORF1ab/nsp31285S1285FtCttTt33B.1.110.30.002155
ORF1ab/nsp31285S1285StcTtcA23B.1.1600.000062
ORF1ab/nsp31285S1285StcTtcC13B.1.1600.000031
ORF1ab/nsp31285S1285StcTtcG33B.1.1770.00004
ORF1ab/nsp31285S1285FtCttTt33B.1.177.40.000633
ORF1ab/nsp31285S1285FtCttTt33B.1.177.570.000843
ORF1ab/nsp31285S1285StcTtcC33B.1.20.000026
ORF1ab/nsp31285S1285FtCttTt33B.1.2980.006342
ORF1ab/nsp31285S1285FtCttTt33B.1.351.20.000908
ORF1ab/nsp31285S1285delTCT---33B.1.36.170.001482
ORF1ab/nsp31285S1285FtCttTt33B.1.438.10.000322
ORF1ab/nsp31285S1285FtCttTt33B.1.5240.004219
ORF1ab/nsp31285S1285FtCttTt33B.1.5640.001278
ORF1ab/nsp31285S1285FtCttTt33B.1.60.051724
ORF1ab/nsp31285S1285YtCttAt33B.1.617.20.000011
ORF1ab/nsp31285S1285FtCttTt33C.360.002732
ORF1ab/nsp31285S1285delTCT---33P.10.000047
ORF1ab/nsp31285S1285FtCttTt33P.1.70.000958
ORF1ab/nsp31285S1285FtCttTt33P.40.011407
ORF1ab/nsp31285S1285CtCTtGC220.111111
ORF1ab/nsp31285S1285FtCttTt220.111111
ORF1ab/nsp31285S1285ATctGct220.111111
ORF1ab/nsp31285S1285VTCTGTC220.111111
ORF1ab/nsp31285S1285FtCttTt22A.280.005291
ORF1ab/nsp31285S1285VTCTGTC22All0
ORF1ab/nsp31285S1285FtCttTt22AY.100.00106
ORF1ab/nsp31285S1285PTctCct22AY.1020.000053
ORF1ab/nsp31285S1285FtCttTt22AY.1160.000574
ORF1ab/nsp31285S1285FtCttTt22AY.120.000632
ORF1ab/nsp31285S1285delTCT---22AY.190.002281
ORF1ab/nsp31285S1285StcTtcA22AY.250.000012
ORF1ab/nsp31285S1285PTctCct22AY.4.20.000043
ORF1ab/nsp31285S1285FtCttTt22AY.4.30.001684
ORF1ab/nsp31285S1285del1tCtt-t22AY.440.000012
ORF1ab/nsp31285S1285FtCttTt22AY.46.60.000144
ORF1ab/nsp31285S1285delTCT---22AY.50.000041
ORF1ab/nsp31285S1285delTCT---22AY.5.30.000675
ORF1ab/nsp31285S1285FtCttTt22AY.660.002139
ORF1ab/nsp31285S1285delTCT---22AY.75.10.000361
ORF1ab/nsp31285S1285FtCttTt22AY.770.002255
ORF1ab/nsp31285S1285FtCttTt22AY.790.002421
ORF1ab/nsp31285S1285FtCttTt22AY.880.001768
ORF1ab/nsp31285S1285delTCT---22AY.90.000135
ORF1ab/nsp31285S1285CtCttGt22AY.910.001461
ORF1ab/nsp31285S1285FtCttTt22AY.990.002099
ORF1ab/nsp31285S1285FtCttTt22B0.000256
ORF1ab/nsp31285S1285PTctCct22B.1.10.000036
ORF1ab/nsp31285S1285FtCttTt22B.1.1.1590.009346
ORF1ab/nsp31285S1285YtCttAt22B.1.1.1920.004619
ORF1ab/nsp31285S1285FtCttTt22B.1.1.2430.008163
ORF1ab/nsp31285S1285FtCttTt22B.1.1.2550.006061
ORF1ab/nsp31285S1285FtCttTt22B.1.1.2840.000215
ORF1ab/nsp31285S1285delTCT---22B.1.1.370.000386
ORF1ab/nsp31285S1285FtCttTt22B.1.1.3740.004751
ORF1ab/nsp31285S1285del1tcTtc-12B.1.1.70.000001
ORF1ab/nsp31285S1285del1Tct-ct12B.1.1.70.000001
ORF1ab/nsp31285S1285CtCttGt22B.1.1600.000062
ORF1ab/nsp31285S1285delTCT---22B.1.1600.000062
ORF1ab/nsp31285S1285StcTtcC22B.1.177.120.000303
ORF1ab/nsp31285S1285FtCttTt22B.1.177.190.002861
ORF1ab/nsp31285S1285FtCttTt22B.1.177.360.032258
ORF1ab/nsp31285S1285delTCT---22B.1.177.40.000422
ORF1ab/nsp31285S1285FtCttTt22B.1.177.430.002954
ORF1ab/nsp31285S1285FtCttTt22B.1.177.460.001837
ORF1ab/nsp31285S1285FtCttTt22B.1.177.600.000437
ORF1ab/nsp31285S1285delTCT---22B.1.177.70.00033
ORF1ab/nsp31285S1285FtCttTt22B.1.177.800.003824
ORF1ab/nsp31285S1285FtCttTt22B.1.177.90.002663
ORF1ab/nsp31285S1285del1tCtt-t22B.1.20.000018
ORF1ab/nsp31285S1285TTctAct22B.1.20.000018
ORF1ab/nsp31285S1285YtCttAt22B.1.20.000018
ORF1ab/nsp31285S1285FtCttTt22B.1.2400.000431
ORF1ab/nsp31285S1285ATctGct22B.1.258.110.000793
ORF1ab/nsp31285S1285FtCttTt22B.1.3050.004301
ORF1ab/nsp31285S1285FtCttTt22B.1.3110.000549
ORF1ab/nsp31285S1285FtCttTt22B.1.3490.00143
ORF1ab/nsp31285S1285FtCttTt22B.1.3600.025316
ORF1ab/nsp31285S1285FtCttTt22B.1.3690.00057
ORF1ab/nsp31285S1285FtCttTt22B.1.3750.001639
ORF1ab/nsp31285S1285FtCttTt22B.1.3810.015625
ORF1ab/nsp31285S1285FtCttTt22B.1.4040.002604
ORF1ab/nsp31285S1285FtCttTt22B.1.4160.002538
ORF1ab/nsp31285S1285FtCttTt22B.1.4990.002101
ORF1ab/nsp31285S1285FtCttTt22B.1.5610.000794
ORF1ab/nsp31285S1285FtCttTt22B.1.5650.001621
ORF1ab/nsp31285S1285FtCttTt22B.1.575.20.009615
ORF1ab/nsp31285S1285FtCttTt22B.1.5950.000522
ORF1ab/nsp31285S1285FtCttTt22B.1.6020.013072
ORF1ab/nsp31285S1285TTctAct22B.1.617.20.000008
ORF1ab/nsp31285S1285PTctCct22B.1.617.20.000008
ORF1ab/nsp31285S1285FtCttTt22B.1.6280.000705
ORF1ab/nsp31285S1285FtCttTt22B.1.6320.013423
ORF1ab/nsp31285S1285StcTtcC22B.1.6370.000146
ORF1ab/nsp31285S1285FtCttTt22B.280.006557
ORF1ab/nsp31285S1285FtCttTt22B.60.00182
ORF1ab/nsp31285S1285StcTtcC22C.300.003454
ORF1ab/nsp31285S1285FtCttTt22N.50.003534
ORF1ab/nsp31285S1285YtCttAt22P.10.000032
ORF1ab/nsp31285S1285StcTtcC22P.1.170.000324
ORF1ab/nsp31285S1285YtCttAt11A0.000387
ORF1ab/nsp31285S1285FtCttTt11A0.000387
ORF1ab/nsp31285S1285delTCT---11AD.20.000219
ORF1ab/nsp31285S1285FtCttTt11AH.20.012048
ORF1ab/nsp31285S1285del2TCt--t11All0
ORF1ab/nsp31285S1285LTCTCTG11All0
ORF1ab/nsp31285S1285PTctCct11AS.10.009524
ORF1ab/nsp31285S1285delTCT---11AY.10.000396
ORF1ab/nsp31285S1285FtCttTt11AY.10.000396
ORF1ab/nsp31285S1285StcTtcC11AY.1020.000027
ORF1ab/nsp31285S1285FtCttTt11AY.1040.001984
ORF1ab/nsp31285S1285FtCttTt11AY.1060.000335
ORF1ab/nsp31285S1285FtCttTt11AY.1080.001103
ORF1ab/nsp31285S1285FtCttTt11AY.1110.000183
ORF1ab/nsp31285S1285StcTtcC11AY.1130.000142
ORF1ab/nsp31285S1285StcTtcC11AY.1190.000035
ORF1ab/nsp31285S1285delTCT---11AY.1200.000037
ORF1ab/nsp31285S1285del1tCtt-t11AY.120.10.000321
ORF1ab/nsp31285S1285FtCttTt11AY.120.20.001285
ORF1ab/nsp31285S1285ATctGct11AY.200.000039
ORF1ab/nsp31285S1285PTctCct11AY.200.000039
ORF1ab/nsp31285S1285FtCttTt11AY.220.002092
ORF1ab/nsp31285S1285StcTtcC11AY.260.000028
ORF1ab/nsp31285S1285StcTtcA11AY.270.000065
ORF1ab/nsp31285S1285FtCttTt11AY.280.00189
ORF1ab/nsp31285S1285FtCttTt11AY.29.10.000221
ORF1ab/nsp31285S1285LTCTCTG11AY.30.00001
ORF1ab/nsp31285S1285PTctCct11AY.30.00001
ORF1ab/nsp31285S1285FtCttTt11AY.300.000396
ORF1ab/nsp31285S1285ATctGct11AY.330.000067
ORF1ab/nsp31285S1285delTCT---11AY.330.000067
ORF1ab/nsp31285S1285PTctCct11AY.330.000067
ORF1ab/nsp31285S1285TTctAct11AY.34.10.00051
ORF1ab/nsp31285S1285YtCttAt11AY.350.000233
ORF1ab/nsp31285S1285ATctGct11AY.360.000148
ORF1ab/nsp31285S1285CtCttGt11AY.390.000025
ORF1ab/nsp31285S1285TTctAct11AY.40.000002
ORF1ab/nsp31285S1285ATctGct11AY.4.20.000022
ORF1ab/nsp31285S1285FtCttTt11AY.4.2.10.000149
ORF1ab/nsp31285S1285FtCttTt11AY.400.000964
ORF1ab/nsp31285S1285YtCttAt11AY.430.000004
ORF1ab/nsp31285S1285PTctCct11AY.430.000004
ORF1ab/nsp31285S1285CtCttGt11AY.430.000004
ORF1ab/nsp31285S1285StcTtcC11AY.440.000006
ORF1ab/nsp31285S1285delTCT---11AY.460.000104
ORF1ab/nsp31285S1285CtCttGt11AY.460.000104
ORF1ab/nsp31285S1285FtCttTt11AY.46.10.001027
ORF1ab/nsp31285S1285delTCT---11AY.46.20.000635
ORF1ab/nsp31285S1285delTCT---11AY.470.000031
ORF1ab/nsp31285S1285PTctCct11AY.470.000031
ORF1ab/nsp31285S1285StcTtcC11AY.470.000031
ORF1ab/nsp31285S1285FtCttTt11AY.480.000465
ORF1ab/nsp31285S1285PTctCct11AY.50.000021
ORF1ab/nsp31285S1285YtCttAt11AY.5.30.000337
ORF1ab/nsp31285S1285FtCttTt11AY.5.30.000337
ORF1ab/nsp31285S1285FtCttTt11AY.5.40.000277
ORF1ab/nsp31285S1285FtCttTt11AY.510.000909
ORF1ab/nsp31285S1285CtCttGt11AY.540.000095
ORF1ab/nsp31285S1285FtCttTt11AY.550.000917
ORF1ab/nsp31285S1285ATctGct11AY.550.000917
ORF1ab/nsp31285S1285FtCttTt11AY.560.001605
ORF1ab/nsp31285S1285FtCttTt11AY.580.000907
ORF1ab/nsp31285S1285delTCT---11AY.590.00053
ORF1ab/nsp31285S1285delTCT---11AY.60.000041
ORF1ab/nsp31285S1285delTCT---11AY.600.000938
ORF1ab/nsp31285S1285TTcTAcG11AY.670.000464
ORF1ab/nsp31285S1285FtCttTt11AY.670.000464
ORF1ab/nsp31285S1285FtCttTt11AY.70.000196
ORF1ab/nsp31285S1285StcTtcC11AY.700.000209
ORF1ab/nsp31285S1285PTctCct11AY.710.000475
ORF1ab/nsp31285S1285FtCttTt11AY.720.001361
ORF1ab/nsp31285S1285PTctCct11AY.75.10.00018
ORF1ab/nsp31285S1285delTCT---11AY.840.000437
ORF1ab/nsp31285S1285FtCttTt11AY.870.000833
ORF1ab/nsp31285S1285FtCttTt11AY.890.004902
ORF1ab/nsp31285S1285FtCttTt11AY.900.000684
ORF1ab/nsp31285S1285FtCttTt11AY.940.000443
ORF1ab/nsp31285S1285StcTtcC11AY.990.001049
ORF1ab/nsp31285S1285TTcTAcC11AY.990.001049
ORF1ab/nsp31285S1285PTctCct11B.10.000009
ORF1ab/nsp31285S1285FtCttTt11B.1.1.10.000327
ORF1ab/nsp31285S1285FtCttTt11B.1.1.100.001115
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1290.009174
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1410.002012
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1520.04
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1610.003534
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1640.005155
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1860.003436
ORF1ab/nsp31285S1285FtCttTt11B.1.1.1890.001513
ORF1ab/nsp31285S1285PTctCct11B.1.1.1960.005714
ORF1ab/nsp31285S1285ATctGct11B.1.1.2140.000055
ORF1ab/nsp31285S1285delTCT---11B.1.1.2210.010101
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2210.010101
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2650.003155
ORF1ab/nsp31285S1285FtCttTt11B.1.1.270.00565
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2720.005208
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2730.006757
ORF1ab/nsp31285S1285delTCT---11B.1.1.2790.001121
ORF1ab/nsp31285S1285FtCttTt11B.1.1.2880.001916
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3010.001179
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3110.000358
ORF1ab/nsp31285S1285delTCT---11B.1.1.3110.000358
ORF1ab/nsp31285S1285delTCT---11B.1.1.3120.001912
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3120.001912
ORF1ab/nsp31285S1285YtCttAt11B.1.1.3170.000412
ORF1ab/nsp31285S1285FtCttTt11B.1.1.330.000421
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3400.045455
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3480.000796
ORF1ab/nsp31285S1285delTCT---11B.1.1.3480.000796
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3490.010309
ORF1ab/nsp31285S1285delTCT---11B.1.1.3610.045455
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3680.003086
ORF1ab/nsp31285S1285FtCttTt11B.1.1.3690.000446
ORF1ab/nsp31285S1285TTctAct11B.1.1.3690.000446
ORF1ab/nsp31285S1285ATctGct11B.1.1.370.000193
ORF1ab/nsp31285S1285delTCT---11B.1.1.390.00051
ORF1ab/nsp31285S1285FtCttTt11B.1.1.4060.006494
ORF1ab/nsp31285S1285delTCT---11B.1.1.4090.002833
ORF1ab/nsp31285S1285YtCttAt11B.1.1.4090.002833
ORF1ab/nsp31285S1285delTCT---11B.1.1.440.00241
ORF1ab/nsp31285S1285YtCttAt11B.1.1.4480.002033
ORF1ab/nsp31285S1285StcTtcC11B.1.1.5190.00004
ORF1ab/nsp31285S1285YtCttAt11B.1.1.5190.00004
ORF1ab/nsp31285S1285FtCttTt11B.1.1.5230.001563
ORF1ab/nsp31285S1285FtCttTt11B.1.1.580.005376
ORF1ab/nsp31285S1285FtCttTt11B.1.1.630.000386
ORF1ab/nsp31285S1285del2TCt--t11B.1.1.70.000001
ORF1ab/nsp31285S1285FtCttTt11B.1.1.980.018519
ORF1ab/nsp31285S1285FtCttTt11B.1.1110.001175
ORF1ab/nsp31285S1285FtCttTt11B.1.1390.000733
ORF1ab/nsp31285S1285FtCttTt11B.1.1460.004237
ORF1ab/nsp31285S1285FtCttTt11B.1.1570.002985
ORF1ab/nsp31285S1285YtCttAt11B.1.1600.000031
ORF1ab/nsp31285S1285FtCttTt11B.1.160.160.000929
ORF1ab/nsp31285S1285FtCttTt11B.1.160.90.007194
ORF1ab/nsp31285S1285delTCT---11B.1.177.110.001698
ORF1ab/nsp31285S1285delTCT---11B.1.177.150.000631
ORF1ab/nsp31285S1285FtCttTt11B.1.177.150.000631
ORF1ab/nsp31285S1285FtCttTt11B.1.177.160.000664
ORF1ab/nsp31285S1285delTCT---11B.1.177.170.000821
ORF1ab/nsp31285S1285FtCttTt11B.1.177.290.066667
ORF1ab/nsp31285S1285FtCttTt11B.1.177.320.00135
ORF1ab/nsp31285S1285delTCT---11B.1.177.350.000691
ORF1ab/nsp31285S1285FtCttTt11B.1.177.380.010417
ORF1ab/nsp31285S1285FtCttTt11B.1.177.420.000894
ORF1ab/nsp31285S1285FtCttTt11B.1.177.50.001242
ORF1ab/nsp31285S1285delTCT---11B.1.177.510.004566
ORF1ab/nsp31285S1285delTCT---11B.1.177.520.001757
ORF1ab/nsp31285S1285delTCT---11B.1.177.560.000668
ORF1ab/nsp31285S1285FtCttTt11B.1.177.580.001332
ORF1ab/nsp31285S1285delTCT---11B.1.177.600.000218
ORF1ab/nsp31285S1285FtCttTt11B.1.177.620.001192
ORF1ab/nsp31285S1285delTCT---11B.1.177.630.002703
ORF1ab/nsp31285S1285FtCttTt11B.1.177.670.007634
ORF1ab/nsp31285S1285FtCttTt11B.1.177.70.000165
ORF1ab/nsp31285S1285FtCttTt11B.1.177.810.000189
ORF1ab/nsp31285S1285StcTtcA11B.1.177.810.000189
ORF1ab/nsp31285S1285FtCttTt11B.1.177.820.000477
ORF1ab/nsp31285S1285FtCttTt11B.1.177.860.000183
ORF1ab/nsp31285S1285FtCttTt11B.1.177.870.000728
ORF1ab/nsp31285S1285delTCT---11B.1.177.870.000728
ORF1ab/nsp31285S1285delTCT---11B.1.177.90.001332
ORF1ab/nsp31285S1285FtCttTt11B.1.1890.004292
ORF1ab/nsp31285S1285delTCT---11B.1.20.000009
ORF1ab/nsp31285S1285FtCttTt11B.1.2060.000816
ORF1ab/nsp31285S1285StcTtcC11B.1.2100.002132
ORF1ab/nsp31285S1285FtCttTt11B.1.2100.002132
ORF1ab/nsp31285S1285delTCT---11B.1.221.10.002907
ORF1ab/nsp31285S1285FtCttTt11B.1.221.10.002907
ORF1ab/nsp31285S1285FtCttTt11B.1.2320.000537
ORF1ab/nsp31285S1285PTctCct11B.1.2400.000216
ORF1ab/nsp31285S1285FtCttTt11B.1.2410.000812
ORF1ab/nsp31285S1285ATctGct11B.1.2520.006623
ORF1ab/nsp31285S1285delTCT---11B.1.2580.000067
ORF1ab/nsp31285S1285delTCT---11B.1.258.100.011364
ORF1ab/nsp31285S1285StcTtcC11B.1.258.170.000104
ORF1ab/nsp31285S1285FtCttTt11B.1.258.20.004505
ORF1ab/nsp31285S1285FtCttTt11B.1.2600.003344
ORF1ab/nsp31285S1285ATctGct11B.1.3110.000275
ORF1ab/nsp31285S1285FtCttTt11B.1.3400.004292
ORF1ab/nsp31285S1285delTCT---11B.1.3490.000715
ORF1ab/nsp31285S1285PTctCct11B.1.3510.00003
ORF1ab/nsp31285S1285YtCttAt11B.1.3510.00003
ORF1ab/nsp31285S1285FtCttTt11B.1.351.30.000876
ORF1ab/nsp31285S1285ATctGct11B.1.3560.001727
ORF1ab/nsp31285S1285PTctCct11B.1.360.000146
ORF1ab/nsp31285S1285FtCttTt11B.1.36.10.00114
ORF1ab/nsp31285S1285FtCttTt11B.1.36.180.00042
ORF1ab/nsp31285S1285delTCT---11B.1.36.180.00042
ORF1ab/nsp31285S1285YtCttAt11B.1.36.200.016949
ORF1ab/nsp31285S1285del1tCtt-t11B.1.36.390.002217
ORF1ab/nsp31285S1285FtCttTt11B.1.36.70.004
ORF1ab/nsp31285S1285FtCttTt11B.1.3620.001541
ORF1ab/nsp31285S1285FtCttTt11B.1.3670.000792
ORF1ab/nsp31285S1285FtCttTt11B.1.3780.006849
ORF1ab/nsp31285S1285FtCttTt11B.1.3880.090909
ORF1ab/nsp31285S1285delTCT---11B.1.3890.001002
ORF1ab/nsp31285S1285FtCttTt11B.1.3960.000706
ORF1ab/nsp31285S1285FtCttTt11B.1.4000.000429
ORF1ab/nsp31285S1285PTctCct11B.1.4000.000429
ORF1ab/nsp31285S1285FtCttTt11B.1.400.10.015152
ORF1ab/nsp31285S1285delTCT---11B.1.4090.000781
ORF1ab/nsp31285S1285FtCttTt11B.1.4280.00102
ORF1ab/nsp31285S1285FtCttTt11B.1.428.30.012821
ORF1ab/nsp31285S1285FtCttTt11B.1.4350.011364
ORF1ab/nsp31285S1285FtCttTt11B.1.4480.002625
ORF1ab/nsp31285S1285FtCttTt11B.1.4590.004082
ORF1ab/nsp31285S1285FtCttTt11B.1.466.20.000391
ORF1ab/nsp31285S1285FtCttTt11B.1.4680.005714
ORF1ab/nsp31285S1285FtCttTt11B.1.4710.002732
ORF1ab/nsp31285S1285FtCttTt11B.1.4730.019231
ORF1ab/nsp31285S1285FtCttTt11B.1.4970.000315
ORF1ab/nsp31285S1285FtCttTt11B.1.5030.002488
ORF1ab/nsp31285S1285FtCttTt11B.1.5090.000866
ORF1ab/nsp31285S1285PTctCct11B.1.5170.000427
ORF1ab/nsp31285S1285FtCttTt11B.1.5210.004975
ORF1ab/nsp31285S1285delTCT---11B.1.5250.000113
ORF1ab/nsp31285S1285CtCttGt11B.1.5260.000024
ORF1ab/nsp31285S1285FtCttTt11B.1.5750.000303
ORF1ab/nsp31285S1285FtCttTt11B.1.5760.000907
ORF1ab/nsp31285S1285delTCT---11B.1.5850.027778
ORF1ab/nsp31285S1285PTctCct11B.1.5960.000087
ORF1ab/nsp31285S1285FtCttTt11B.1.6090.000479
ORF1ab/nsp31285S1285FtCttTt11B.1.6120.002653
ORF1ab/nsp31285S1285delTCT---11B.1.617.30.002985
ORF1ab/nsp31285S1285StcTtcA11B.1.619.10.000641
ORF1ab/nsp31285S1285FtCttTt11B.1.6200.000946
ORF1ab/nsp31285S1285delTCT---11B.1.6210.000089
ORF1ab/nsp31285S1285YtCttAt11B.1.6210.000089
ORF1ab/nsp31285S1285delTCT---11B.1.6300.005236
ORF1ab/nsp31285S1285FtCttTt11B.30.000831
ORF1ab/nsp31285S1285delTCT---11B.340.013699
ORF1ab/nsp31285S1285FtCttTt11B.40.002208
ORF1ab/nsp31285S1285FtCttTt11B.450.003831
ORF1ab/nsp31285S1285FtCttTt11B.500.111111
ORF1ab/nsp31285S1285delTCT---11B.550.00295
ORF1ab/nsp31285S1285FtCttTt11B.560.028571
ORF1ab/nsp31285S1285TTcTAcC11C.350.000774
ORF1ab/nsp31285S1285FtCttTt11D.20.000075
ORF1ab/nsp31285S1285CtCttGt11P.10.000016
ORF1ab/nsp31285S1285delTCT---11P.1.150.000232
ORF1ab/nsp31285S1285FtCttTt11P.1.160.000374
ORF1ab/nsp31285S1285ATctGct11P.1.170.000162
ORF1ab/nsp31285S1285FtCttTt11P.30.001595
ORF1ab/nsp31285S1285delTCT---11Q.10.000126
ORF1ab/nsp31285S1285CtCttGt11Q.40.000455
ORF1ab/nsp31285S1285FtCttTt11Q.70.001111
ORF1ab/nsp31285S1285delTCT---11U.30.003861
ORF1ab/nsp31285S1285delTCT---11W.40.001351