CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1283

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31283D1283DD2101DsyngaCgaT8694869416566-6568
ORF1ab/nsp31283D1283YD2101YnonsynGacTac131913180.9992426566-6568
ORF1ab/nsp31283D1283YD2101YnonsynGaCTaT131910.000758156566-6568
ORF1ab/nsp31283D1283ND2101NnonsynGacAac35135116566-6568
ORF1ab/nsp31283D1283delD2101deldelGAC---27827816566-6568
ORF1ab/nsp31283D1283ED2101EnonsyngaCgaA90860.9555566566-6568
ORF1ab/nsp31283D1283ED2101EnonsyngaCgaG9040.04444446566-6568
ORF1ab/nsp31283D1283GD2101GnonsyngAcgGc797916566-6568
ORF1ab/nsp31283D1283HD2101HnonsynGacCac48460.9583336566-6568
ORF1ab/nsp31283D1283HD2101HnonsynGaCCaT4820.04166676566-6568
ORF1ab/nsp31283D1283VD2101VnonsyngAcgTc44430.9772736566-6568
ORF1ab/nsp31283D1283VD2101VnonsyngACgTA4410.02272736566-6568
ORF1ab/nsp31283D1283AD2101AnonsyngAcgCc202016566-6568
ORF1ab/nsp31283D1283KD2101KnonsynGaCAaA2216566-6568
ORF1ab/nsp31283D1283QD2101QnonsynGaCCaA2216566-6568
ORF1ab/nsp31283D1283del2D2101del2delgACg--2216566-6568
ORF1ab/nsp31283D1283del1D2101del1delGac-ac210.56566-6568
ORF1ab/nsp31283D1283del1D2101del1delgaCga-210.56566-6568
ORF1ab/nsp31283D1283SD2101SnonsynGAcAGc1116566-6568
ORF1ab/nsp31283D1283PD2101PnonsynGAcCCc1116566-6568
ORF1ab/nsp31283D1283FD2101FnonsynGACTTT1116566-6568
ORF1ab/nsp31283D1283LD2101LnonsynGACTTG1116566-6568

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31283D1283DgaCgaT86948694All0.001663
ORF1ab/nsp31283D1283DgaCgaT50335033Q.30.729949
ORF1ab/nsp31283D1283YGacTac13181319All0.000252
ORF1ab/nsp31283D1283YGaCTaT11319All0
ORF1ab/nsp31283D1283DgaCgaT799799B.1.1.70.000715
ORF1ab/nsp31283D1283DgaCgaT697697AY.40.001085
ORF1ab/nsp31283D1283YGacTac493494B.1.1.70.000441
ORF1ab/nsp31283D1283YGaCTaT1494B.1.1.70.000001
ORF1ab/nsp31283D1283NGacAac351351All0.000067
ORF1ab/nsp31283D1283delGAC---278278All0.000053
ORF1ab/nsp31283D1283DgaCgaT257257B.1.4290.006047
ORF1ab/nsp31283D1283DgaCgaT217217B.1.617.20.000817
ORF1ab/nsp31283D1283delGAC---126126B.1.1.70.000113
ORF1ab/nsp31283D1283NGacAac120120AY.1030.000745
ORF1ab/nsp31283D1283DgaCgaT117117B.1.1770.001541
ORF1ab/nsp31283D1283DgaCgaT102102AY.1000.004693
ORF1ab/nsp31283D1283DgaCgaT101101P.10.001591
ORF1ab/nsp31283D1283YGacTac9595AY.40.000148
ORF1ab/nsp31283D1283EgaCgaA8690All0.000016
ORF1ab/nsp31283D1283EgaCgaG490All0.000001
ORF1ab/nsp31283D1283YGacTac8282AY.440.000499
ORF1ab/nsp31283D1283YGacTac8181B.1.5260.001904
ORF1ab/nsp31283D1283GgAcgGc7979All0.000015
ORF1ab/nsp31283D1283NGacAac7272AY.10.028492
ORF1ab/nsp31283D1283DgaCgaT7171B.1.1.5190.002819
ORF1ab/nsp31283D1283YGacTac6565B.1.1.700.022169
ORF1ab/nsp31283D1283DgaCgaT6161B.10.000559
ORF1ab/nsp31283D1283YGacTac6161B.1.617.20.00023
ORF1ab/nsp31283D1283YGacTac5858AY.540.00553
ORF1ab/nsp31283D1283DgaCgaT5858B.1.20.000511
ORF1ab/nsp31283D1283DgaCgaT5858B.1.36.360.034919
ORF1ab/nsp31283D1283DgaCgaT5757AY.1030.000354
ORF1ab/nsp31283D1283NGacAac5252B.1.1.70.000047
ORF1ab/nsp31283D1283DgaCgaT5050B.1.5260.001175
ORF1ab/nsp31283D1283HGacCac4648All0.000009
ORF1ab/nsp31283D1283HGaCCaT248All0
ORF1ab/nsp31283D1283VgAcgTc4344All0.000008
ORF1ab/nsp31283D1283VgACgTA144All0
ORF1ab/nsp31283D1283DgaCgaT4343AY.250.000259
ORF1ab/nsp31283D1283DgaCgaT4343AY.430.000191
ORF1ab/nsp31283D1283YGacTac4141AY.1190.001448
ORF1ab/nsp31283D1283DgaCgaT3939B.1.10.000707
ORF1ab/nsp31283D1283HGacCac3939B.1.1.70.000035
ORF1ab/nsp31283D1283DgaCgaT3939B.1.2580.002595
ORF1ab/nsp31283D1283DgaCgaT3838AY.1020.001008
ORF1ab/nsp31283D1283DgaCgaT3838B.1.1600.001185
ORF1ab/nsp31283D1283VgAcgTc3838B.1.5960.003311
ORF1ab/nsp31283D1283DgaCgaT3535AY.200.00136
ORF1ab/nsp31283D1283DgaCgaT3030AY.230.002092
ORF1ab/nsp31283D1283EgaCgaA2627B.1.1.70.000023
ORF1ab/nsp31283D1283EgaCgaG127B.1.1.70.000001
ORF1ab/nsp31283D1283YGacTac2626AY.430.000115
ORF1ab/nsp31283D1283DgaCgaT2424AY.46.50.004762
ORF1ab/nsp31283D1283YGacTac2323AY.1030.000143
ORF1ab/nsp31283D1283YGacTac2323AY.4.50.002472
ORF1ab/nsp31283D1283DgaCgaT2323AY.440.00014
ORF1ab/nsp31283D1283delGAC---2323B.1.1770.000303
ORF1ab/nsp31283D1283DgaCgaT2222P.20.004106
ORF1ab/nsp31283D1283DgaCgaT2121B.1.177.810.003976
ORF1ab/nsp31283D1283DgaCgaT2121P.1.140.001004
ORF1ab/nsp31283D1283AgAcgCc2020All0.000004
ORF1ab/nsp31283D1283DgaCgaT2020B.1.5960.001743
ORF1ab/nsp31283D1283delGAC---1919AY.40.00003
ORF1ab/nsp31283D1283NGacAac1919B.1.20.000167
ORF1ab/nsp31283D1283DgaCgaT1818AY.390.000445
ORF1ab/nsp31283D1283NGacAac1818AY.40.000028
ORF1ab/nsp31283D1283DgaCgaT1818B.1.2430.001253
ORF1ab/nsp31283D1283DgaCgaT1717AY.30.000169
ORF1ab/nsp31283D1283DgaCgaT1717AY.420.000684
ORF1ab/nsp31283D1283DgaCgaT1717B.1.221.20.068273
ORF1ab/nsp31283D1283DgaCgaT1616AY.150.035556
ORF1ab/nsp31283D1283YGacTac1616B.10.000147
ORF1ab/nsp31283D1283DgaCgaT1616C.370.001857
ORF1ab/nsp31283D1283YGacTac1515AY.1020.000398
ORF1ab/nsp31283D1283DgaCgaT1515AY.340.001454
ORF1ab/nsp31283D1283DgaCgaT1515B.1.177.600.003277
ORF1ab/nsp31283D1283DgaCgaT1414Q.80.002309
ORF1ab/nsp31283D1283YGacTac1313AY.30.000129
ORF1ab/nsp31283D1283DgaCgaT1313AY.750.000728
ORF1ab/nsp31283D1283DgaCgaT1313AY.830.022414
ORF1ab/nsp31283D1283YGacTac1313B.1.1.5190.000516
ORF1ab/nsp31283D1283YGacTac1313Q.80.002144
ORF1ab/nsp31283D1283GgAcgGc1212AY.1030.000075
ORF1ab/nsp31283D1283YGacTac1212AY.470.000373
ORF1ab/nsp31283D1283DgaCgaT1111AY.470.000342
ORF1ab/nsp31283D1283DgaCgaT1111B.1.1.1471
ORF1ab/nsp31283D1283DgaCgaT1111B.1.1.1590.051402
ORF1ab/nsp31283D1283DgaCgaT1111B.1.3510.000327
ORF1ab/nsp31283D1283NGacAac1111P.10.000173
ORF1ab/nsp31283D1283EgaCgaA1010AY.60.000411
ORF1ab/nsp31283D1283EgaCgaA1010B.1.617.20.000038
ORF1ab/nsp31283D1283YGacTac1010C.160.010604
ORF1ab/nsp31283D1283delGAC---99AY.4.50.000967
ORF1ab/nsp31283D1283delGAC---99AY.430.00004
ORF1ab/nsp31283D1283DgaCgaT99AY.50.000186
ORF1ab/nsp31283D1283DgaCgaT99B.1.360.001313
ORF1ab/nsp31283D1283EgaCgaA88AY.1000.000368
ORF1ab/nsp31283D1283DgaCgaT88AY.1050.005145
ORF1ab/nsp31283D1283GgAcgGc88AY.140.000704
ORF1ab/nsp31283D1283YGacTac88AY.250.000048
ORF1ab/nsp31283D1283DgaCgaT88AY.330.000534
ORF1ab/nsp31283D1283GgAcgGc88AY.40.000012
ORF1ab/nsp31283D1283DgaCgaT88AY.4.20.000174
ORF1ab/nsp31283D1283delGAC---88B.10.000073
ORF1ab/nsp31283D1283NGacAac88B.1.3690.002282
ORF1ab/nsp31283D1283DgaCgaT77AY.1210.000947
ORF1ab/nsp31283D1283EgaCgaA77AY.250.000042
ORF1ab/nsp31283D1283DgaCgaT77AY.260.000198
ORF1ab/nsp31283D1283NGacAac77AY.430.000031
ORF1ab/nsp31283D1283YGacTac77AY.740.00081
ORF1ab/nsp31283D1283YGacTac77B.1.10.000127
ORF1ab/nsp31283D1283NGacAac77B.1.10.000127
ORF1ab/nsp31283D1283EgaCgaA77B.1.1.630.002701
ORF1ab/nsp31283D1283GgAcgGc77B.1.1.70.000006
ORF1ab/nsp31283D1283DgaCgaT77B.1.2400.001509
ORF1ab/nsp31283D1283DgaCgaT77B.1.3110.001922
ORF1ab/nsp31283D1283DgaCgaT77B.1.6370.000512
ORF1ab/nsp31283D1283DgaCgaT66AY.290.000095
ORF1ab/nsp31283D1283YGacTac66AY.340.000582
ORF1ab/nsp31283D1283DgaCgaT66AY.60.000247
ORF1ab/nsp31283D1283YGacTac66AY.90.000406
ORF1ab/nsp31283D1283DgaCgaT66B.1.1.2140.000333
ORF1ab/nsp31283D1283YGacTac66B.1.1.3550.092308
ORF1ab/nsp31283D1283YGacTac66B.1.20.000053
ORF1ab/nsp31283D1283DgaCgaT66B.1.3460.007864
ORF1ab/nsp31283D1283DgaCgaT66B.1.36.220.007246
ORF1ab/nsp31283D1283NGacAac66B.1.617.20.000023
ORF1ab/nsp31283D1283delGAC---66B.1.617.20.000023
ORF1ab/nsp31283D1283DgaCgaT66N.50.010601
ORF1ab/nsp31283D1283DgaCgaT55AY.1190.000177
ORF1ab/nsp31283D1283GgAcgGc55AY.30.00005
ORF1ab/nsp31283D1283YGacTac55AY.39.10.000198
ORF1ab/nsp31283D1283GgAcgGc55AY.430.000022
ORF1ab/nsp31283D1283GgAcgGc55AY.440.00003
ORF1ab/nsp31283D1283YGacTac55AY.50.000103
ORF1ab/nsp31283D1283YGacTac55AY.950.003805
ORF1ab/nsp31283D1283DgaCgaT55AY.98.10.000242
ORF1ab/nsp31283D1283YGacTac55AY.99.20.000461
ORF1ab/nsp31283D1283DgaCgaT55B.1.1.3760.029762
ORF1ab/nsp31283D1283YGacTac55B.1.1770.000066
ORF1ab/nsp31283D1283DgaCgaT55B.1.2060.004078
ORF1ab/nsp31283D1283DgaCgaT55B.1.2340.00066
ORF1ab/nsp31283D1283DgaCgaT55B.1.5820.002453
ORF1ab/nsp31283D1283DgaCgaT55B.400.001821
ORF1ab/nsp31283D1283DgaCgaT55D.20.000375
ORF1ab/nsp31283D1283AgAcgCc44AY.1030.000025
ORF1ab/nsp31283D1283DgaCgaT44AY.1200.000149
ORF1ab/nsp31283D1283AgAcgCc44AY.3.10.000341
ORF1ab/nsp31283D1283DgaCgaT44AY.39.10.000158
ORF1ab/nsp31283D1283YGacTac44AY.80.002424
ORF1ab/nsp31283D1283DgaCgaT44AY.930.001092
ORF1ab/nsp31283D1283EgaCgaA34B.10.000027
ORF1ab/nsp31283D1283EgaCgaG14B.10.000009
ORF1ab/nsp31283D1283delGAC---44B.1.10.000073
ORF1ab/nsp31283D1283DgaCgaT44B.1.1.3180.001207
ORF1ab/nsp31283D1283YGacTac44B.1.1.370.000771
ORF1ab/nsp31283D1283YGacTac44B.1.3510.000119
ORF1ab/nsp31283D1283DgaCgaT44B.1.4270.000202
ORF1ab/nsp31283D1283YGacTac44B.1.4270.000202
ORF1ab/nsp31283D1283YGacTac44B.1.6280.001409
ORF1ab/nsp31283D1283DgaCgaT33AD.20.000657
ORF1ab/nsp31283D1283YGacTac33AY.1200.000112
ORF1ab/nsp31283D1283DgaCgaT33AY.120.10.000963
ORF1ab/nsp31283D1283delGAC---33AY.250.000018
ORF1ab/nsp31283D1283YGacTac33AY.350.000699
ORF1ab/nsp31283D1283YGacTac33AY.390.000074
ORF1ab/nsp31283D1283AgAcgCc33AY.40.000005
ORF1ab/nsp31283D1283GgAcgGc33AY.4.20.000065
ORF1ab/nsp31283D1283GgAcgGc33AY.420.000121
ORF1ab/nsp31283D1283DgaCgaT33AY.450.000365
ORF1ab/nsp31283D1283DgaCgaT33AY.46.40.000494
ORF1ab/nsp31283D1283DgaCgaT33AY.90.000203
ORF1ab/nsp31283D1283DgaCgaT33AY.99.20.000276
ORF1ab/nsp31283D1283YGacTac33B.1.1.280.000934
ORF1ab/nsp31283D1283AgAcgCc33B.1.1.70.000003
ORF1ab/nsp31283D1283DgaCgaT33B.1.177.570.000843
ORF1ab/nsp31283D1283DgaCgaT33B.1.177.70.000495
ORF1ab/nsp31283D1283YGacTac33B.1.4090.002344
ORF1ab/nsp31283D1283DgaCgaT33B.1.466.20.001174
ORF1ab/nsp31283D1283DgaCgaT33B.1.5090.002597
ORF1ab/nsp31283D1283DgaCgaT33B.1.5300.021429
ORF1ab/nsp31283D1283DgaCgaT33B.1.5760.00272
ORF1ab/nsp31283D1283YGacTac33P.10.000047
ORF1ab/nsp31283D1283delGAC---33P.10.000047
ORF1ab/nsp31283D1283DgaCgaT33Q.10.000379
ORF1ab/nsp31283D1283KGaCAaA220.111111
ORF1ab/nsp31283D1283HGaCCaT220.111111
ORF1ab/nsp31283D1283NGacAac220.111111
ORF1ab/nsp31283D1283QGaCCaA220.111111
ORF1ab/nsp31283D1283DgaCgaT22A.190.018868
ORF1ab/nsp31283D1283YGacTac22A.2.50.000998
ORF1ab/nsp31283D1283QGaCCaA22All0
ORF1ab/nsp31283D1283KGaCAaA22All0
ORF1ab/nsp31283D1283del2gACg--22All0
ORF1ab/nsp31283D1283del1Gac-ac12All0
ORF1ab/nsp31283D1283del1gaCga-12All0
ORF1ab/nsp31283D1283GgAcgGc22AU.20.004843
ORF1ab/nsp31283D1283DgaCgaT22AY.1040.003968
ORF1ab/nsp31283D1283YGacTac22AY.1170.000169
ORF1ab/nsp31283D1283DgaCgaT22AY.1170.000169
ORF1ab/nsp31283D1283DgaCgaT22AY.160.000759
ORF1ab/nsp31283D1283GgAcgGc22AY.230.000139
ORF1ab/nsp31283D1283DgaCgaT22AY.240.000862
ORF1ab/nsp31283D1283YGacTac22AY.330.000134
ORF1ab/nsp31283D1283NGacAac22AY.330.000134
ORF1ab/nsp31283D1283NGacAac22AY.360.000296
ORF1ab/nsp31283D1283EgaCgaA22AY.40.000003
ORF1ab/nsp31283D1283del2gACg--22AY.40.000003
ORF1ab/nsp31283D1283EgaCgaA22AY.4.20.000043
ORF1ab/nsp31283D1283EgaCgaA22AY.450.000243
ORF1ab/nsp31283D1283YGacTac22AY.450.000243
ORF1ab/nsp31283D1283DgaCgaT22AY.460.000208
ORF1ab/nsp31283D1283delGAC---22AY.50.000041
ORF1ab/nsp31283D1283delGAC---22AY.5.30.000675
ORF1ab/nsp31283D1283DgaCgaT22AY.530.000575
ORF1ab/nsp31283D1283YGacTac22AY.580.001815
ORF1ab/nsp31283D1283DgaCgaT22AY.610.00021
ORF1ab/nsp31283D1283GgAcgGc22AY.7.20.001119
ORF1ab/nsp31283D1283delGAC---22AY.75.10.000361
ORF1ab/nsp31283D1283DgaCgaT22AY.9.10.000167
ORF1ab/nsp31283D1283DgaCgaT22AY.9.20.000073
ORF1ab/nsp31283D1283DgaCgaT22B.1.1.1090.08
ORF1ab/nsp31283D1283EgaCgaA22B.1.1.3060.000877
ORF1ab/nsp31283D1283YGacTac22B.1.1.330.000842
ORF1ab/nsp31283D1283DgaCgaT22B.1.1.3890.012121
ORF1ab/nsp31283D1283DgaCgaT22B.1.1.4090.005666
ORF1ab/nsp31283D1283VgAcgTc22B.1.1.70.000002
ORF1ab/nsp31283D1283YGacTac22B.1.130.004751
ORF1ab/nsp31283D1283YGacTac22B.1.1600.000062
ORF1ab/nsp31283D1283delGAC---22B.1.1600.000062
ORF1ab/nsp31283D1283NGacAac22B.1.1660.016949
ORF1ab/nsp31283D1283DgaCgaT22B.1.177.100.001756
ORF1ab/nsp31283D1283delGAC---22B.1.177.40.000422
ORF1ab/nsp31283D1283DgaCgaT22B.1.177.650.001331
ORF1ab/nsp31283D1283delGAC---22B.1.177.70.00033
ORF1ab/nsp31283D1283YGacTac22B.1.2320.001075
ORF1ab/nsp31283D1283YGacTac22B.1.2580.000133
ORF1ab/nsp31283D1283DgaCgaT22B.1.36.170.000988
ORF1ab/nsp31283D1283delGAC---22B.1.36.170.000988
ORF1ab/nsp31283D1283YGacTac22B.1.3960.001411
ORF1ab/nsp31283D1283DgaCgaT22B.1.4160.002538
ORF1ab/nsp31283D1283DgaCgaT22B.1.5680.002222
ORF1ab/nsp31283D1283DgaCgaT22B.1.5730.012195
ORF1ab/nsp31283D1283DgaCgaT22B.1.5950.000522
ORF1ab/nsp31283D1283DgaCgaT22B.1.6000.011696
ORF1ab/nsp31283D1283DgaCgaT22B.1.6090.000959
ORF1ab/nsp31283D1283HGacCac22B.1.617.20.000008
ORF1ab/nsp31283D1283GgAcgGc22B.1.617.20.000008
ORF1ab/nsp31283D1283YGacTac22B.1.621.10.001012
ORF1ab/nsp31283D1283DgaCgaT22B.1.6230.001073
ORF1ab/nsp31283D1283DgaCgaT22C.80.008929
ORF1ab/nsp31283D1283DgaCgaT22P.1.120.000968
ORF1ab/nsp31283D1283DgaCgaT22P.1.170.000324
ORF1ab/nsp31283D1283YGacTac22P.20.000373
ORF1ab/nsp31283D1283DgaCgaT22Q.40.00091
ORF1ab/nsp31283D1283DgaCgaT11A.10.000282
ORF1ab/nsp31283D1283AgAcgCc11A.2.5.20.001572
ORF1ab/nsp31283D1283delGAC---11AD.20.000219
ORF1ab/nsp31283D1283DgaCgaT11AL.10.012987
ORF1ab/nsp31283D1283SGAcAGc11All0
ORF1ab/nsp31283D1283PGAcCCc11All0
ORF1ab/nsp31283D1283LGACTTG11All0
ORF1ab/nsp31283D1283FGACTTT11All0
ORF1ab/nsp31283D1283delGAC---11AY.10.000396
ORF1ab/nsp31283D1283GgAcgGc11AY.1020.000027
ORF1ab/nsp31283D1283YGacTac11AY.1040.001984
ORF1ab/nsp31283D1283NGacAac11AY.1110.000183
ORF1ab/nsp31283D1283HGacCac11AY.1130.000142
ORF1ab/nsp31283D1283DgaCgaT11AY.1160.000287
ORF1ab/nsp31283D1283NGacAac11AY.1170.000085
ORF1ab/nsp31283D1283DgaCgaT11AY.1180.000063
ORF1ab/nsp31283D1283YGacTac11AY.1180.000063
ORF1ab/nsp31283D1283AgAcgCc11AY.1190.000035
ORF1ab/nsp31283D1283EgaCgaA11AY.1190.000035
ORF1ab/nsp31283D1283YGacTac11AY.120.000316
ORF1ab/nsp31283D1283delGAC---11AY.1200.000037
ORF1ab/nsp31283D1283DgaCgaT11AY.120.2.10.000498
ORF1ab/nsp31283D1283DgaCgaT11AY.130.000161
ORF1ab/nsp31283D1283YGacTac11AY.160.00038
ORF1ab/nsp31283D1283DgaCgaT11AY.16.10.00047
ORF1ab/nsp31283D1283YGacTac11AY.170.008197
ORF1ab/nsp31283D1283delGAC---11AY.190.00114
ORF1ab/nsp31283D1283VgAcgTc11AY.190.00114
ORF1ab/nsp31283D1283YGacTac11AY.230.00007
ORF1ab/nsp31283D1283GgAcgGc11AY.250.000006
ORF1ab/nsp31283D1283NGacAac11AY.250.000006
ORF1ab/nsp31283D1283YGacTac11AY.260.000028
ORF1ab/nsp31283D1283delGAC---11AY.30.00001
ORF1ab/nsp31283D1283GgAcgGc11AY.3.10.000085
ORF1ab/nsp31283D1283YGacTac11AY.3.10.000085
ORF1ab/nsp31283D1283DgaCgaT11AY.300.000396
ORF1ab/nsp31283D1283delGAC---11AY.330.000067
ORF1ab/nsp31283D1283DgaCgaT11AY.34.10.00051
ORF1ab/nsp31283D1283delGAC---11AY.350.000233
ORF1ab/nsp31283D1283YGacTac11AY.360.000148
ORF1ab/nsp31283D1283YGacTac11AY.370.000316
ORF1ab/nsp31283D1283NGacAac11AY.370.000316
ORF1ab/nsp31283D1283NGacAac11AY.390.000025
ORF1ab/nsp31283D1283DgaCgaT11AY.4.10.000737
ORF1ab/nsp31283D1283DgaCgaT11AY.4.30.000842
ORF1ab/nsp31283D1283YGacTac11AY.420.00004
ORF1ab/nsp31283D1283HGacCac11AY.430.000004
ORF1ab/nsp31283D1283LGACTTG11AY.440.000006
ORF1ab/nsp31283D1283AgAcgCc11AY.440.000006
ORF1ab/nsp31283D1283NGacAac11AY.440.000006
ORF1ab/nsp31283D1283NGacAac11AY.450.000122
ORF1ab/nsp31283D1283delGAC---11AY.460.000104
ORF1ab/nsp31283D1283delGAC---11AY.46.20.000635
ORF1ab/nsp31283D1283YGacTac11AY.46.50.000198
ORF1ab/nsp31283D1283YGacTac11AY.46.60.000072
ORF1ab/nsp31283D1283DgaCgaT11AY.5.30.000337
ORF1ab/nsp31283D1283DgaCgaT11AY.5.40.000277
ORF1ab/nsp31283D1283DgaCgaT11AY.540.000095
ORF1ab/nsp31283D1283DgaCgaT11AY.550.000917
ORF1ab/nsp31283D1283YGacTac11AY.560.001605
ORF1ab/nsp31283D1283delGAC---11AY.590.00053
ORF1ab/nsp31283D1283DgaCgaT11AY.590.00053
ORF1ab/nsp31283D1283delGAC---11AY.60.000041
ORF1ab/nsp31283D1283delGAC---11AY.600.000938
ORF1ab/nsp31283D1283YGacTac11AY.650.000533
ORF1ab/nsp31283D1283YGacTac11AY.680.000274
ORF1ab/nsp31283D1283YGacTac11AY.70.000196
ORF1ab/nsp31283D1283YGacTac11AY.7.10.000113
ORF1ab/nsp31283D1283DgaCgaT11AY.740.000116
ORF1ab/nsp31283D1283GgAcgGc11AY.750.000056
ORF1ab/nsp31283D1283DgaCgaT11AY.75.10.00018
ORF1ab/nsp31283D1283DgaCgaT11AY.820.001357
ORF1ab/nsp31283D1283NGacAac11AY.840.000437
ORF1ab/nsp31283D1283delGAC---11AY.840.000437
ORF1ab/nsp31283D1283DgaCgaT11AY.850.000427
ORF1ab/nsp31283D1283YGacTac11AY.870.000833
ORF1ab/nsp31283D1283DgaCgaT11AY.870.000833
ORF1ab/nsp31283D1283delGAC---11AY.90.000068
ORF1ab/nsp31283D1283YGacTac11AY.9.20.000037
ORF1ab/nsp31283D1283DgaCgaT11AY.910.00073
ORF1ab/nsp31283D1283YGacTac11AY.91.10.004065
ORF1ab/nsp31283D1283NGacAac11AY.920.000287
ORF1ab/nsp31283D1283YGacTac11AY.920.000287
ORF1ab/nsp31283D1283DgaCgaT11AY.950.000761
ORF1ab/nsp31283D1283GgAcgGc11AY.980.000079
ORF1ab/nsp31283D1283DgaCgaT11AY.980.000079
ORF1ab/nsp31283D1283GgAcgGc11AY.98.10.000048
ORF1ab/nsp31283D1283PGAcCCc11AY.990.001049
ORF1ab/nsp31283D1283HGacCac11AY.990.001049
ORF1ab/nsp31283D1283AgAcgCc11AY.99.20.000092
ORF1ab/nsp31283D1283NGacAac11B0.000128
ORF1ab/nsp31283D1283DgaCgaT11B0.000128
ORF1ab/nsp31283D1283HGacCac11B.10.000009
ORF1ab/nsp31283D1283GgAcgGc11B.10.000009
ORF1ab/nsp31283D1283VgAcgTc11B.10.000009
ORF1ab/nsp31283D1283GgAcgGc11B.1.10.000018
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.10.000327
ORF1ab/nsp31283D1283YGacTac11B.1.1.10.000327
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1180.010204
ORF1ab/nsp31283D1283YGacTac11B.1.1.1600.02381
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1720.018182
ORF1ab/nsp31283D1283NGacAac11B.1.1.1740.003378
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1760.000439
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1920.002309
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.1980.001468
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp31283D1283delGAC---11B.1.1.2210.010101
ORF1ab/nsp31283D1283YGacTac11B.1.1.2220.000204
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2220.000204
ORF1ab/nsp31283D1283delGAC---11B.1.1.2320.001815
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.250.000569
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2630.001558
ORF1ab/nsp31283D1283YGacTac11B.1.1.2690.001353
ORF1ab/nsp31283D1283delGAC---11B.1.1.2790.001121
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp31283D1283YGacTac11B.1.1.2980.000862
ORF1ab/nsp31283D1283FGACTTT11B.1.1.3060.000438
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3060.000438
ORF1ab/nsp31283D1283NGacAac11B.1.1.3090.005848
ORF1ab/nsp31283D1283delGAC---11B.1.1.3110.000358
ORF1ab/nsp31283D1283delGAC---11B.1.1.3120.001912
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3170.000412
ORF1ab/nsp31283D1283YGacTac11B.1.1.3180.000302
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.330.000421
ORF1ab/nsp31283D1283delGAC---11B.1.1.3480.000796
ORF1ab/nsp31283D1283delGAC---11B.1.1.3610.045455
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3660.015873
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.3690.000446
ORF1ab/nsp31283D1283delGAC---11B.1.1.370.000193
ORF1ab/nsp31283D1283EgaCgaA11B.1.1.390.00051
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.390.00051
ORF1ab/nsp31283D1283delGAC---11B.1.1.390.00051
ORF1ab/nsp31283D1283delGAC---11B.1.1.4090.002833
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.4120.007634
ORF1ab/nsp31283D1283NGacAac11B.1.1.4160.000905
ORF1ab/nsp31283D1283YGacTac11B.1.1.4280.009434
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.4340.000349
ORF1ab/nsp31283D1283delGAC---11B.1.1.440.00241
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.4480.002033
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.460.004367
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.5250.005464
ORF1ab/nsp31283D1283del1gaCga-11B.1.1.70.000001
ORF1ab/nsp31283D1283DgaCgaT11B.1.1.700.000341
ORF1ab/nsp31283D1283DgaCgaT11B.1.1110.001175
ORF1ab/nsp31283D1283DgaCgaT11B.1.1260.001276
ORF1ab/nsp31283D1283DgaCgaT11B.1.1280.000635
ORF1ab/nsp31283D1283YGacTac11B.1.160.160.000929
ORF1ab/nsp31283D1283DgaCgaT11B.1.160.160.000929
ORF1ab/nsp31283D1283GgAcgGc11B.1.1770.000013
ORF1ab/nsp31283D1283delGAC---11B.1.177.110.001698
ORF1ab/nsp31283D1283delGAC---11B.1.177.150.000631
ORF1ab/nsp31283D1283delGAC---11B.1.177.170.000821
ORF1ab/nsp31283D1283DgaCgaT11B.1.177.210.000076
ORF1ab/nsp31283D1283EgaCgaA11B.1.177.210.000076
ORF1ab/nsp31283D1283DgaCgaT11B.1.177.320.00135
ORF1ab/nsp31283D1283delGAC---11B.1.177.350.000691
ORF1ab/nsp31283D1283delGAC---11B.1.177.510.004566
ORF1ab/nsp31283D1283delGAC---11B.1.177.520.001757
ORF1ab/nsp31283D1283delGAC---11B.1.177.560.000668
ORF1ab/nsp31283D1283delGAC---11B.1.177.600.000218
ORF1ab/nsp31283D1283DgaCgaT11B.1.177.620.001192
ORF1ab/nsp31283D1283delGAC---11B.1.177.630.002703
ORF1ab/nsp31283D1283delGAC---11B.1.177.870.000728
ORF1ab/nsp31283D1283delGAC---11B.1.177.90.001332
ORF1ab/nsp31283D1283GgAcgGc11B.1.20.000009
ORF1ab/nsp31283D1283delGAC---11B.1.20.000009
ORF1ab/nsp31283D1283SGAcAGc11B.1.20.000009
ORF1ab/nsp31283D1283EgaCgaA11B.1.20.000009
ORF1ab/nsp31283D1283VgAcgTc11B.1.20.000009
ORF1ab/nsp31283D1283HGacCac11B.1.2100.002132
ORF1ab/nsp31283D1283YGacTac11B.1.2210.000071
ORF1ab/nsp31283D1283NGacAac11B.1.2210.000071
ORF1ab/nsp31283D1283delGAC---11B.1.221.10.002907
ORF1ab/nsp31283D1283GgAcgGc11B.1.2340.000132
ORF1ab/nsp31283D1283NGacAac11B.1.2360.002053
ORF1ab/nsp31283D1283DgaCgaT11B.1.2370.004975
ORF1ab/nsp31283D1283delGAC---11B.1.2580.000067
ORF1ab/nsp31283D1283delGAC---11B.1.258.100.011364
ORF1ab/nsp31283D1283DgaCgaT11B.1.258.170.000104
ORF1ab/nsp31283D1283AgAcgCc11B.1.258.210.007752
ORF1ab/nsp31283D1283DgaCgaT11B.1.2980.002114
ORF1ab/nsp31283D1283YGacTac11B.1.3200.001245
ORF1ab/nsp31283D1283delGAC---11B.1.3490.000715
ORF1ab/nsp31283D1283EgaCgaA11B.1.3510.00003
ORF1ab/nsp31283D1283NGacAac11B.1.3510.00003
ORF1ab/nsp31283D1283YGacTac11B.1.360.000146
ORF1ab/nsp31283D1283NGacAac11B.1.360.000146
ORF1ab/nsp31283D1283delGAC---11B.1.36.180.00042
ORF1ab/nsp31283D1283DgaCgaT11B.1.36.290.000517
ORF1ab/nsp31283D1283NGacAac11B.1.36.360.000602
ORF1ab/nsp31283D1283DgaCgaT11B.1.36.80.001
ORF1ab/nsp31283D1283GgAcgGc11B.1.3690.000285
ORF1ab/nsp31283D1283delGAC---11B.1.3890.001002
ORF1ab/nsp31283D1283NGacAac11B.1.4000.000429
ORF1ab/nsp31283D1283DgaCgaT11B.1.4090.000781
ORF1ab/nsp31283D1283delGAC---11B.1.4090.000781
ORF1ab/nsp31283D1283EgaCgaG11B.1.4290.000024
ORF1ab/nsp31283D1283GgAcgGc11B.1.4290.000024
ORF1ab/nsp31283D1283DgaCgaT11B.1.4390.005917
ORF1ab/nsp31283D1283DgaCgaT11B.1.4560.003268
ORF1ab/nsp31283D1283GgAcgGc11B.1.4630.008065
ORF1ab/nsp31283D1283NGacAac11B.1.466.20.000391
ORF1ab/nsp31283D1283DgaCgaT11B.1.4710.002732
ORF1ab/nsp31283D1283AgAcgCc11B.1.4970.000315
ORF1ab/nsp31283D1283DgaCgaT11B.1.4990.00105
ORF1ab/nsp31283D1283DgaCgaT11B.1.5010.007353
ORF1ab/nsp31283D1283YGacTac11B.1.5040.03125
ORF1ab/nsp31283D1283YGacTac11B.1.5170.000427
ORF1ab/nsp31283D1283delGAC---11B.1.5250.000113
ORF1ab/nsp31283D1283NGacAac11B.1.5260.000024
ORF1ab/nsp31283D1283DgaCgaT11B.1.5580.004566
ORF1ab/nsp31283D1283DgaCgaT11B.1.5640.000426
ORF1ab/nsp31283D1283DgaCgaT11B.1.5750.000303
ORF1ab/nsp31283D1283GgAcgGc11B.1.5800.004065
ORF1ab/nsp31283D1283DgaCgaT11B.1.5800.004065
ORF1ab/nsp31283D1283YGacTac11B.1.5820.000491
ORF1ab/nsp31283D1283delGAC---11B.1.5850.027778
ORF1ab/nsp31283D1283DgaCgaT11B.1.5880.00091
ORF1ab/nsp31283D1283NGacAac11B.1.5960.000087
ORF1ab/nsp31283D1283YGacTac11B.1.5970.00463
ORF1ab/nsp31283D1283YGacTac11B.1.5990.00365
ORF1ab/nsp31283D1283YGacTac11B.1.617.10.000129
ORF1ab/nsp31283D1283VgACgTA11B.1.617.20.000004
ORF1ab/nsp31283D1283del1Gac-ac11B.1.617.20.000004
ORF1ab/nsp31283D1283delGAC---11B.1.617.30.002985
ORF1ab/nsp31283D1283DgaCgaT11B.1.6180.004032
ORF1ab/nsp31283D1283DgaCgaT11B.1.6200.000946
ORF1ab/nsp31283D1283delGAC---11B.1.6210.000089
ORF1ab/nsp31283D1283DgaCgaT11B.1.6210.000089
ORF1ab/nsp31283D1283delGAC---11B.1.6300.005236
ORF1ab/nsp31283D1283DgaCgaT11B.1.6340.003425
ORF1ab/nsp31283D1283NGacAac11B.230.002924
ORF1ab/nsp31283D1283delGAC---11B.340.013699
ORF1ab/nsp31283D1283EgaCgaA11B.400.000364
ORF1ab/nsp31283D1283DgaCgaT11C.180.002591
ORF1ab/nsp31283D1283DgaCgaT11C.350.000774
ORF1ab/nsp31283D1283EgaCgaA11D.20.000075
ORF1ab/nsp31283D1283YGacTac11D.20.000075
ORF1ab/nsp31283D1283DgaCgaT11N.40.004255
ORF1ab/nsp31283D1283YGacTac11P.1.150.000232
ORF1ab/nsp31283D1283DgaCgaT11P.1.150.000232
ORF1ab/nsp31283D1283delGAC---11P.1.150.000232
ORF1ab/nsp31283D1283DgaCgaT11P.1.70.000319
ORF1ab/nsp31283D1283YGacTac11P.1.70.000319
ORF1ab/nsp31283D1283YGacTac11Q.10.000126
ORF1ab/nsp31283D1283delGAC---11Q.10.000126
ORF1ab/nsp31283D1283EgaCgaG11R.10.00009
ORF1ab/nsp31283D1283DgaCgaT11R.10.00009
ORF1ab/nsp31283D1283delGAC---11U.30.003861
ORF1ab/nsp31283D1283delGAC---11W.40.001351