CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1265 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31265S1265delS2083deldelAGT---1164116416512-6514

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31265S1265delAGT---11641164All0.000223
ORF1ab/nsp31265S1265delAGT---160160B.1.617.20.000602
ORF1ab/nsp31265S1265delAGT---114114AY.40.000177
ORF1ab/nsp31265S1265delAGT---7979AY.390.001952
ORF1ab/nsp31265S1265delAGT---7171AY.46.50.014087
ORF1ab/nsp31265S1265delAGT---6363P.1.70.020115
ORF1ab/nsp31265S1265delAGT---5757B.1.1.2220.011628
ORF1ab/nsp31265S1265delAGT---5757B.1.1.70.000051
ORF1ab/nsp31265S1265delAGT---3737B.1.1770.000487
ORF1ab/nsp31265S1265delAGT---3232AY.1030.000199
ORF1ab/nsp31265S1265delAGT---3030AY.440.000183
ORF1ab/nsp31265S1265delAGT---2525B.1.3510.000743
ORF1ab/nsp31265S1265delAGT---2424B.10.00022
ORF1ab/nsp31265S1265delAGT---2323AY.400.022179
ORF1ab/nsp31265S1265delAGT---2121AY.430.000093
ORF1ab/nsp31265S1265delAGT---1818AY.290.000284
ORF1ab/nsp31265S1265delAGT---1616B.1.1600.000499
ORF1ab/nsp31265S1265delAGT---1515P.10.000236
ORF1ab/nsp31265S1265delAGT---1414AY.140.001232
ORF1ab/nsp31265S1265delAGT---1414B.1.20.000123
ORF1ab/nsp31265S1265delAGT---1313AY.250.000078
ORF1ab/nsp31265S1265delAGT---1313AY.420.000523
ORF1ab/nsp31265S1265delAGT---1313B.1.110.30.009339
ORF1ab/nsp31265S1265delAGT---1010AY.30.000099
ORF1ab/nsp31265S1265delAGT---99B.1.10.000163
ORF1ab/nsp31265S1265delAGT---88AY.460.000833
ORF1ab/nsp31265S1265delAGT---88AY.9.20.000294
ORF1ab/nsp31265S1265delAGT---77AY.1110.001282
ORF1ab/nsp31265S1265delAGT---77AY.260.000198
ORF1ab/nsp31265S1265delAGT---77AY.330.000467
ORF1ab/nsp31265S1265delAGT---66A0.002322
ORF1ab/nsp31265S1265delAGT---66AY.1190.000212
ORF1ab/nsp31265S1265delAGT---66AY.4.20.00013
ORF1ab/nsp31265S1265delAGT---66B.1.1.3160.00555
ORF1ab/nsp31265S1265delAGT---66B.1.214.20.003597
ORF1ab/nsp31265S1265delAGT---55AY.1020.000133
ORF1ab/nsp31265S1265delAGT---55AY.1200.000186
ORF1ab/nsp31265S1265delAGT---55AY.360.000741
ORF1ab/nsp31265S1265delAGT---55AY.450.000608
ORF1ab/nsp31265S1265delAGT---44A.2.20.006757
ORF1ab/nsp31265S1265delAGT---44B.1.1.250.002274
ORF1ab/nsp31265S1265delAGT---44B.1.6370.000292
ORF1ab/nsp31265S1265delAGT---44P.1.140.000191
ORF1ab/nsp31265S1265delAGT---33AY.1060.001005
ORF1ab/nsp31265S1265delAGT---33AY.200.000117
ORF1ab/nsp31265S1265delAGT---33AY.270.000194
ORF1ab/nsp31265S1265delAGT---33AY.470.000093
ORF1ab/nsp31265S1265delAGT---33AY.50.000062
ORF1ab/nsp31265S1265delAGT---33B.1.1.500.002037
ORF1ab/nsp31265S1265delAGT---33B.1.4290.000071
ORF1ab/nsp31265S1265delAGT---33B.1.5750.00091
ORF1ab/nsp31265S1265delAGT---33C.1.20.012766
ORF1ab/nsp31265S1265delAGT---33C.36.30.001702
ORF1ab/nsp31265S1265delAGT---22AY.10.000791
ORF1ab/nsp31265S1265delAGT---22AY.230.000139
ORF1ab/nsp31265S1265delAGT---22AY.320.001065
ORF1ab/nsp31265S1265delAGT---22AY.380.000999
ORF1ab/nsp31265S1265delAGT---22AY.410.000588
ORF1ab/nsp31265S1265delAGT---22AY.46.40.000329
ORF1ab/nsp31265S1265delAGT---22AY.5.30.000675
ORF1ab/nsp31265S1265delAGT---22AY.60.000082
ORF1ab/nsp31265S1265delAGT---22AY.610.00021
ORF1ab/nsp31265S1265delAGT---22AY.9.10.000167
ORF1ab/nsp31265S1265delAGT---22B.1.1.390.001019
ORF1ab/nsp31265S1265delAGT---22B.1.2400.000431
ORF1ab/nsp31265S1265delAGT---22B.1.2430.000139
ORF1ab/nsp31265S1265delAGT---22B.1.36.80.002
ORF1ab/nsp31265S1265delAGT---22B.1.4110.007407
ORF1ab/nsp31265S1265delAGT---22B.1.5960.000174
ORF1ab/nsp31265S1265delAGT---22C.370.000232
ORF1ab/nsp31265S1265delAGT---22D.20.00015
ORF1ab/nsp31265S1265delAGT---11A.10.000282
ORF1ab/nsp31265S1265delAGT---11AY.1000.000046
ORF1ab/nsp31265S1265delAGT---11AY.1070.000466
ORF1ab/nsp31265S1265delAGT---11AY.1210.000135
ORF1ab/nsp31265S1265delAGT---11AY.130.000161
ORF1ab/nsp31265S1265delAGT---11AY.160.00038
ORF1ab/nsp31265S1265delAGT---11AY.190.00114
ORF1ab/nsp31265S1265delAGT---11AY.340.000097
ORF1ab/nsp31265S1265delAGT---11AY.39.10.00004
ORF1ab/nsp31265S1265delAGT---11AY.4.50.000107
ORF1ab/nsp31265S1265delAGT---11AY.46.60.000072
ORF1ab/nsp31265S1265delAGT---11AY.510.000909
ORF1ab/nsp31265S1265delAGT---11AY.530.000288
ORF1ab/nsp31265S1265delAGT---11AY.540.000095
ORF1ab/nsp31265S1265delAGT---11AY.560.001605
ORF1ab/nsp31265S1265delAGT---11AY.580.000907
ORF1ab/nsp31265S1265delAGT---11AY.590.00053
ORF1ab/nsp31265S1265delAGT---11AY.660.00107
ORF1ab/nsp31265S1265delAGT---11AY.670.000464
ORF1ab/nsp31265S1265delAGT---11AY.720.001361
ORF1ab/nsp31265S1265delAGT---11AY.750.000056
ORF1ab/nsp31265S1265delAGT---11AY.90.000068
ORF1ab/nsp31265S1265delAGT---11AY.930.000273
ORF1ab/nsp31265S1265delAGT---11AZ.20.000821
ORF1ab/nsp31265S1265delAGT---11B0.000128
ORF1ab/nsp31265S1265delAGT---11B.1.1.1280.007092
ORF1ab/nsp31265S1265delAGT---11B.1.1.2550.00303
ORF1ab/nsp31265S1265delAGT---11B.1.1.280.000311
ORF1ab/nsp31265S1265delAGT---11B.1.1.2970.002237
ORF1ab/nsp31265S1265delAGT---11B.1.1.3090.005848
ORF1ab/nsp31265S1265delAGT---11B.1.1.3170.000412
ORF1ab/nsp31265S1265delAGT---11B.1.1.330.000421
ORF1ab/nsp31265S1265delAGT---11B.1.1.3350.012987
ORF1ab/nsp31265S1265delAGT---11B.1.1.3370.003597
ORF1ab/nsp31265S1265delAGT---11B.1.1.3480.000796
ORF1ab/nsp31265S1265delAGT---11B.1.1.3750.011905
ORF1ab/nsp31265S1265delAGT---11B.1.1.4090.002833
ORF1ab/nsp31265S1265delAGT---11B.1.1.4200.001006
ORF1ab/nsp31265S1265delAGT---11B.1.1.4480.002033
ORF1ab/nsp31265S1265delAGT---11B.1.1.4860.001577
ORF1ab/nsp31265S1265delAGT---11B.1.1.5250.005464
ORF1ab/nsp31265S1265delAGT---11B.1.1110.001175
ORF1ab/nsp31265S1265delAGT---11B.1.177.150.000631
ORF1ab/nsp31265S1265delAGT---11B.1.177.510.004566
ORF1ab/nsp31265S1265delAGT---11B.1.177.770.000726
ORF1ab/nsp31265S1265delAGT---11B.1.177.830.001481
ORF1ab/nsp31265S1265delAGT---11B.1.2210.000071
ORF1ab/nsp31265S1265delAGT---11B.1.258.110.000396
ORF1ab/nsp31265S1265delAGT---11B.1.3460.001311
ORF1ab/nsp31265S1265delAGT---11B.1.36.310.001751
ORF1ab/nsp31265S1265delAGT---11B.1.36.380.001642
ORF1ab/nsp31265S1265delAGT---11B.1.3690.000285
ORF1ab/nsp31265S1265delAGT---11B.1.4970.000315
ORF1ab/nsp31265S1265delAGT---11B.1.4990.00105
ORF1ab/nsp31265S1265delAGT---11B.1.5250.000113
ORF1ab/nsp31265S1265delAGT---11B.1.5260.000024
ORF1ab/nsp31265S1265delAGT---11B.1.5270.003704
ORF1ab/nsp31265S1265delAGT---11B.1.5360.02381
ORF1ab/nsp31265S1265delAGT---11B.1.5600.00463
ORF1ab/nsp31265S1265delAGT---11B.1.5610.000397
ORF1ab/nsp31265S1265delAGT---11B.1.596.10.009346
ORF1ab/nsp31265S1265delAGT---11B.1.6200.000946
ORF1ab/nsp31265S1265delAGT---11B.1.6210.000089
ORF1ab/nsp31265S1265delAGT---11B.1.6300.005236
ORF1ab/nsp31265S1265delAGT---11C.360.000911
ORF1ab/nsp31265S1265delAGT---11P.20.000187
ORF1ab/nsp31265S1265delAGT---11Q.10.000126