CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1255 | G1255G | G2073G | syn | ggA | ggG | 646 | 375 | 0.580495 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255G | G2073G | syn | ggA | ggT | 646 | 236 | 0.365325 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255G | G2073G | syn | ggA | ggC | 646 | 35 | 0.0541796 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255del | G2073del | del | GGA | --- | 555 | 555 | 1 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255V | G2073V | nonsyn | gGa | gTa | 497 | 496 | 0.997988 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255V | G2073V | nonsyn | gGA | gTT | 497 | 1 | 0.00201207 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255R | G2073R | nonsyn | Gga | Aga | 207 | 178 | 0.859903 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255R | G2073R | nonsyn | Gga | Cga | 207 | 29 | 0.140097 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255E | G2073E | nonsyn | gGa | gAa | 73 | 72 | 0.986301 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255E | G2073E | nonsyn | gGA | gAG | 73 | 1 | 0.0136986 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255X | G2073X | nonsyn | Gga | Tga | 5 | 3 | 0.6 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255X | G2073X | nonsyn | GGa | TAa | 5 | 1 | 0.2 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255X | G2073X | nonsyn | GGA | TAG | 5 | 1 | 0.2 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255del1 | G2073del1 | del | Gga | -ga | 2 | 2 | 1 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255W | G2073W | nonsyn | GgA | TgG | 1 | 1 | 1 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255A | G2073A | nonsyn | gGa | gCa | 1 | 1 | 1 | 6482-6484 |
ORF1ab/nsp3 | 1255 | G1255Q | G2073Q | nonsyn | GGa | CAa | 1 | 1 | 1 | 6482-6484 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 375 | 646 | All | 0.000072 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 236 | 646 | All | 0.000045 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 35 | 646 | All | 0.000007 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 555 | 555 | All | 0.000106 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 525 | 525 | L.1 | 1 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 496 | 497 | All | 0.000095 |
ORF1ab/nsp3 | 1255 | G1255V | gGA | gTT | 1 | 497 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 258 | 269 | B.1.1.7 | 0.000231 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 8 | 269 | B.1.1.7 | 0.000007 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 3 | 269 | B.1.1.7 | 0.000003 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 218 | 218 | AY.43 | 0.000966 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 178 | 207 | All | 0.000034 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Cga | 29 | 207 | All | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 141 | 141 | D.2 | 0.010581 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 129 | 129 | B.1.621.1 | 0.06525 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 98 | 98 | B.1.400 | 0.042042 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 72 | 73 | All | 0.000014 |
ORF1ab/nsp3 | 1255 | G1255E | gGA | gAG | 1 | 73 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 46 | 46 | AY.7.1 | 0.005184 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 37 | 38 | B.1.1.7 | 0.000033 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Cga | 1 | 38 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Cga | 25 | 25 | Q.1 | 0.003158 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 23 | 23 | B.1.351 | 0.000684 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 18 | 18 | AY.33 | 0.001202 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 17 | 17 | AY.4 | 0.000026 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 15 | 15 | AY.46.5 | 0.002976 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 13 | 13 | B.1.1.7 | 0.000012 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 12 | 13 | B.1.1.7 | 0.000011 |
ORF1ab/nsp3 | 1255 | G1255V | gGA | gTT | 1 | 13 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 12 | 12 | AY.103 | 0.000075 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 12 | 12 | B.1 | 0.00011 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 12 | 12 | B.1.1 | 0.000218 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 11 | 11 | AY.44 | 0.000067 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 10 | 10 | AY.25 | 0.00006 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 10 | 10 | B.1.617.2 | 0.000038 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 10 | 10 | R.1 | 0.0009 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 9 | 9 | AY.102 | 0.000239 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 9 | 9 | AY.30 | 0.003562 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 7 | 7 | AY.39.1 | 0.000277 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 6 | 7 | B.1.2 | 0.000053 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 7 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 6 | 6 | B.1.1.10 | 0.006689 |
ORF1ab/nsp3 | 1255 | G1255X | Gga | Tga | 3 | 5 | All | 0.000001 |
ORF1ab/nsp3 | 1255 | G1255X | GGA | TAG | 1 | 5 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255X | GGa | TAa | 1 | 5 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 5 | 5 | AY.46.2 | 0.003177 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 5 | 5 | AY.99.2 | 0.000461 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 2 | 5 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 2 | 5 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 5 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 5 | 5 | B.1.177 | 0.000066 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 5 | 5 | B.1.617.2 | 0.000019 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 5 | 5 | B.1.628 | 0.001762 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 5 | 5 | C.23 | 0.02907 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 4 | 4 | AY.20 | 0.000155 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 4 | 4 | AY.25 | 0.000024 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 4 | 4 | AY.4 | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 4 | 4 | AY.79 | 0.004843 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 4 | 4 | B.1.36.35 | 0.010417 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 4 | 4 | B.1.617.2 | 0.000015 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 4 | 4 | P.1 | 0.000063 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp3 | 1255 | G1255X | GGa | TAa | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255X | Gga | Tga | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255X | GGA | TAG | 1 | 3 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 3 | 3 | AY.119 | 0.000106 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 3 | 3 | AY.43 | 0.000013 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 3 | 3 | AY.44 | 0.000018 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 2 | 3 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 3 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255E | gGA | gAG | 1 | 2 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | A | 0.000774 |
ORF1ab/nsp3 | 1255 | G1255del1 | Gga | -ga | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.100 | 0.000092 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 2 | 2 | AY.103 | 0.000012 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.2 | 0.000712 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 2 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 2 | AY.20 | 0.000039 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.3 | 0.00002 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 1 | 2 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 2 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | AY.4.1 | 0.001475 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | AY.42 | 0.00008 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.46.6 | 0.000144 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 2 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 1 | 2 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | AY.98.1 | 0.000097 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | B.1.1.432 | 0.002532 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | B.1.366 | 0.009756 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | B.1.429 | 0.000047 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 2 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Cga | 1 | 2 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 2 | 2 | P.1 | 0.000032 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 2 | 2 | P.1.10 | 0.000539 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255W | GgA | TgG | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | A.2.4 | 0.003367 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 1255 | G1255W | GgA | TgG | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255A | gGa | gCa | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255Q | GGa | CAa | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 1 | 1 | AY.117 | 0.000085 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AY.29 | 0.000016 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AY.3.1 | 0.000085 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Cga | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | AY.41 | 0.000294 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1255 | G1255del1 | Gga | -ga | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Cga | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.48 | 0.000465 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.5 | 0.000021 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AY.65 | 0.000533 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 1255 | G1255del1 | Gga | -ga | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 1255 | G1255X | Gga | Tga | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.1.133 | 0.008475 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.1.189 | 0.001513 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B.1.1.298 | 0.000862 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.1.329 | 0.003846 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.1.335 | 0.012987 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | B.1.1.397 | 0.002252 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 1255 | G1255A | gGa | gCa | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 1 | 1 | B.1.177.10 | 0.000878 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggC | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1255 | G1255X | Gga | Tga | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | B.1.36 | 0.000146 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B.1.427 | 0.00005 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.487 | 0.019608 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.595 | 0.000261 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp3 | 1255 | G1255del | GGA | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1255 | G1255R | Gga | Aga | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggT | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.1.623 | 0.000536 |
ORF1ab/nsp3 | 1255 | G1255G | ggA | ggG | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | B.35 | 0.007812 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | D.3 | 0.005917 |
ORF1ab/nsp3 | 1255 | G1255E | gGa | gAa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 1255 | G1255Q | GGa | CAa | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 1255 | G1255V | gGa | gTa | 1 | 1 | P.1 | 0.000016 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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