CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1253 & Codon = gtC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31253V1253VV2071VsyngtTgtC279727650.9885596476-6478

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31253V1253VgtTgtC27652797All0.000529
ORF1ab/nsp31253V1253VgtTgtC20222022AY.390.049967
ORF1ab/nsp31253V1253VgtTgtC297299B.1.20.002615
ORF1ab/nsp31253V1253VgtTgtC136138AY.40.000212
ORF1ab/nsp31253V1253VgtTgtC5353AY.260.0015
ORF1ab/nsp31253V1253VgtTgtC2727B.1.617.20.000102
ORF1ab/nsp31253V1253VgtTgtC2525AY.98.10.001211
ORF1ab/nsp31253V1253VgtTgtC1124B.1.1.70.00001
ORF1ab/nsp31253V1253VgtTgtC1919P.10.000299
ORF1ab/nsp31253V1253VgtTgtC1515AY.1020.000398
ORF1ab/nsp31253V1253VgtTgtC1515B.1.1.570.172414
ORF1ab/nsp31253V1253VgtTgtC1114AY.250.000066
ORF1ab/nsp31253V1253VgtTgtC1010B.1.5610.00397
ORF1ab/nsp31253V1253VgtTgtC78AY.1030.000043
ORF1ab/nsp31253V1253VgtTgtC78AY.430.000031
ORF1ab/nsp31253V1253VgtTgtC88B.10.000073
ORF1ab/nsp31253V1253VgtTgtC77AY.440.000043
ORF1ab/nsp31253V1253VgtTgtC66AY.770.006764
ORF1ab/nsp31253V1253VgtTgtC66B.1.10.000109
ORF1ab/nsp31253V1253VgtTgtC55AY.1130.000712
ORF1ab/nsp31253V1253VgtTgtC55B.1.177.70.000824
ORF1ab/nsp31253V1253VgtTgtC44AY.230.000279
ORF1ab/nsp31253V1253VgtTgtC44B.1.177.730.002265
ORF1ab/nsp31253V1253VgtTgtC44B.1.2390.004884
ORF1ab/nsp31253V1253VgtTgtC33AY.116.10.000934
ORF1ab/nsp31253V1253VgtTgtC33AY.1170.000254
ORF1ab/nsp31253V1253VgtTgtC33AY.1180.000188
ORF1ab/nsp31253V1253VgtTgtC33AY.39.10.000119
ORF1ab/nsp31253V1253VgtTgtC33AY.650.001599
ORF1ab/nsp31253V1253VgtTgtC33B.1.5960.000261
ORF1ab/nsp31253V1253VgtTgtC120.055556
ORF1ab/nsp31253V1253VgtTgtC22AY.160.000759
ORF1ab/nsp31253V1253VgtTgtC22AY.30.00002
ORF1ab/nsp31253V1253VgtTgtC22AY.4.50.000215
ORF1ab/nsp31253V1253VgtTgtC22AY.410.000588
ORF1ab/nsp31253V1253VgtTgtC22AY.670.000929
ORF1ab/nsp31253V1253VgtTgtC22AY.920.000575
ORF1ab/nsp31253V1253VgtTgtC22B0.000256
ORF1ab/nsp31253V1253VgtTgtC22B.1.1600.000062
ORF1ab/nsp31253V1253VgtTgtC22B.1.177.40.000422
ORF1ab/nsp31253V1253VgtTgtC11AY.1000.000046
ORF1ab/nsp31253V1253VgtTgtC11AY.1100.000113
ORF1ab/nsp31253V1253VgtTgtC11AY.1110.000183
ORF1ab/nsp31253V1253VgtTgtC11AY.1190.000035
ORF1ab/nsp31253V1253VgtTgtC11AY.330.000067
ORF1ab/nsp31253V1253VgtTgtC11AY.4.10.000737
ORF1ab/nsp31253V1253VgtTgtC11AY.470.000031
ORF1ab/nsp31253V1253VgtTgtC11AY.560.001605
ORF1ab/nsp31253V1253VgtTgtC11AY.610.000105
ORF1ab/nsp31253V1253VgtTgtC11AY.840.000437
ORF1ab/nsp31253V1253VgtTgtC11AY.910.00073
ORF1ab/nsp31253V1253VgtTgtC11AY.930.000273
ORF1ab/nsp31253V1253VgtTgtC11AY.950.000761
ORF1ab/nsp31253V1253VgtTgtC11AY.980.000079
ORF1ab/nsp31253V1253VgtTgtC11B.1.1.250.000569
ORF1ab/nsp31253V1253VgtTgtC11B.1.1.280.000311
ORF1ab/nsp31253V1253VgtTgtC11B.1.1.3030.002762
ORF1ab/nsp31253V1253VgtTgtC11B.1.1110.001175
ORF1ab/nsp31253V1253VgtTgtC11B.1.2030.0625
ORF1ab/nsp31253V1253VgtTgtC11B.1.5260.000024
ORF1ab/nsp31253V1253VgtTgtC11B.1.6210.000089
ORF1ab/nsp31253V1253VgtTgtC11B.1.6290.013333
ORF1ab/nsp31253V1253VgtTgtC11B.1.6370.000073
ORF1ab/nsp31253V1253VgtTgtC11P.1.140.000048