CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1253 & Codon = gCt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31253V1253AV2071AnonsyngTtgCt2922900.9931516476-6478

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31253V1253AgTtgCt290292All0.000055
ORF1ab/nsp31253V1253AgTtgCt146146B.1.617.20.00055
ORF1ab/nsp31253V1253AgTtgCt9191AY.1000.004187
ORF1ab/nsp31253V1253AgTtgCt1313B.1.1.70.000012
ORF1ab/nsp31253V1253AgTtgCt1010AY.390.000247
ORF1ab/nsp31253V1253AgTtgCt88AY.440.000049
ORF1ab/nsp31253V1253AgTtgCt33AY.190.003421
ORF1ab/nsp31253V1253AgTtgCt22AY.230.000139
ORF1ab/nsp31253V1253AgTtgCt22AY.320.001065
ORF1ab/nsp31253V1253AgTtgCt22AY.40.000003
ORF1ab/nsp31253V1253AgTtgCt12B.1.20.000009
ORF1ab/nsp31253V1253AgTtgCt11AY.1210.000135
ORF1ab/nsp31253V1253AgTtgCt11AY.250.000006
ORF1ab/nsp31253V1253AgTtgCt11AY.380.000499
ORF1ab/nsp31253V1253AgTtgCt11AY.4.2.10.000149
ORF1ab/nsp31253V1253AgTtgCt11AY.4.50.000107
ORF1ab/nsp31253V1253AgTtgCt11AY.430.000004
ORF1ab/nsp31253V1253AgTtgCt11AY.470.000031
ORF1ab/nsp31253V1253AgTtgCt11AY.5.30.000337
ORF1ab/nsp31253V1253AgTtgCt11B.1.1.3490.010309
ORF1ab/nsp31253V1253AgTtgCt11B.1.177.180.00116
ORF1ab/nsp31253V1253AgTtgCt11B.1.2580.000067
ORF1ab/nsp31253V1253AgTtgCt11B.1.2600.003344