CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1251 & Codon = acT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31251T1251TT2069TsynacCacT217017520.8073736470-6472

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31251T1251TacCacT17522170All0.000335
ORF1ab/nsp31251T1251TacCacT531698B.1.1.70.000475
ORF1ab/nsp31251T1251TacCacT120120B.1.2580.007986
ORF1ab/nsp31251T1251TacCacT106116AY.40.000165
ORF1ab/nsp31251T1251TacCacT44109B.1.617.20.000166
ORF1ab/nsp31251T1251TacCacT101102B.1.20.000889
ORF1ab/nsp31251T1251TacCacT6365AY.99.20.005806
ORF1ab/nsp31251T1251TacCacT6363B.1.4181
ORF1ab/nsp31251T1251TacCacT3853AY.440.000231
ORF1ab/nsp31251T1251TacCacT4848B.1.2430.00334
ORF1ab/nsp31251T1251TacCacT845AY.1020.000212
ORF1ab/nsp31251T1251TacCacT2938AY.250.000174
ORF1ab/nsp31251T1251TacCacT3238AY.390.000791
ORF1ab/nsp31251T1251TacCacT3030B.1.1600.000936
ORF1ab/nsp31251T1251TacCacT3030B.1.5270.111111
ORF1ab/nsp31251T1251TacCacT2626AY.4.20.000564
ORF1ab/nsp31251T1251TacCacT2126B.10.000192
ORF1ab/nsp31251T1251TacCacT2626P.10.00041
ORF1ab/nsp31251T1251TacCacT2223AY.46.60.001589
ORF1ab/nsp31251T1251TacCacT2122AY.1030.00013
ORF1ab/nsp31251T1251TacCacT520B.1.1770.000066
ORF1ab/nsp31251T1251TacCacT2020B.1.3460.026212
ORF1ab/nsp31251T1251TacCacT1018AY.430.000044
ORF1ab/nsp31251T1251TacCacT1717AY.9.20.000624
ORF1ab/nsp31251T1251TacCacT1616AY.290.000252
ORF1ab/nsp31251T1251TacCacT1116B.1.177.770.007988
ORF1ab/nsp31251T1251TacCacT1515AY.60.000617
ORF1ab/nsp31251T1251TacCacT1414AY.30.000139
ORF1ab/nsp31251T1251TacCacT514B.1.10.000091
ORF1ab/nsp31251T1251TacCacT1313B.1.4270.000656
ORF1ab/nsp31251T1251TacCacT1013B.1.4290.000235
ORF1ab/nsp31251T1251TacCacT1111P.1.10.003494
ORF1ab/nsp31251T1251TacCacT99AY.3.10.000767
ORF1ab/nsp31251T1251TacCacT99B.1.1.2160.008014
ORF1ab/nsp31251T1251TacCacT99B.1.1.2220.001836
ORF1ab/nsp31251T1251TacCacT28AY.330.000134
ORF1ab/nsp31251T1251TacCacT77AY.740.00081
ORF1ab/nsp31251T1251TacCacT77B.1.2410.005682
ORF1ab/nsp31251T1251TacCacT77C.370.000812
ORF1ab/nsp31251T1251TacCacT66AY.360.000889
ORF1ab/nsp31251T1251TacCacT66B.1.617.10.000774
ORF1ab/nsp31251T1251TacCacT66B.1.621.10.003035
ORF1ab/nsp31251T1251TacCacT55AY.1190.000177
ORF1ab/nsp31251T1251TacCacT45AY.230.000279
ORF1ab/nsp31251T1251TacCacT55AY.840.002187
ORF1ab/nsp31251T1251TacCacT55AY.98.10.000242
ORF1ab/nsp31251T1251TacCacT55B.1.1.3070.012658
ORF1ab/nsp31251T1251TacCacT55B.1.5250.000566
ORF1ab/nsp31251T1251TacCacT45B.1.5260.000094
ORF1ab/nsp31251T1251TacCacT55B.1.5940.15625
ORF1ab/nsp31251T1251TacCacT44AY.340.000388
ORF1ab/nsp31251T1251TacCacT34AY.420.000121
ORF1ab/nsp31251T1251TacCacT24B.1.1.2940.002532
ORF1ab/nsp31251T1251TacCacT44B.1.1.4640.005891
ORF1ab/nsp31251T1251TacCacT44B.1.360.000584
ORF1ab/nsp31251T1251TacCacT44C.10.009569
ORF1ab/nsp31251T1251TacCacT33AY.1000.000138
ORF1ab/nsp31251T1251TacCacT33AY.210.005693
ORF1ab/nsp31251T1251TacCacT23AY.450.000243
ORF1ab/nsp31251T1251TacCacT33AY.50.000062
ORF1ab/nsp31251T1251TacCacT33AY.7.10.000338
ORF1ab/nsp31251T1251TacCacT33B.1.1.100.003344
ORF1ab/nsp31251T1251TacCacT33B.1.1.3480.002389
ORF1ab/nsp31251T1251TacCacT33B.1.1.5190.000119
ORF1ab/nsp31251T1251TacCacT33B.1.1.5280.014423
ORF1ab/nsp31251T1251TacCacT23B.1.177.600.000437
ORF1ab/nsp31251T1251TacCacT23B.1.2210.000142
ORF1ab/nsp31251T1251TacCacT13B.1.3510.00003
ORF1ab/nsp31251T1251TacCacT33B.1.36.80.003
ORF1ab/nsp31251T1251TacCacT33B.1.5960.000261
ORF1ab/nsp31251T1251TacCacT33C.360.002732
ORF1ab/nsp31251T1251TacCacT33R.10.00027
ORF1ab/nsp31251T1251TacCacT22A.30.004193
ORF1ab/nsp31251T1251TacCacT22AY.1090.001479
ORF1ab/nsp31251T1251TacCacT22AY.140.000176
ORF1ab/nsp31251T1251TacCacT22AY.260.000057
ORF1ab/nsp31251T1251TacCacT22AY.29.10.000441
ORF1ab/nsp31251T1251TacCacT12AY.460.000104
ORF1ab/nsp31251T1251TacCacT12AY.550.000917
ORF1ab/nsp31251T1251TacCacT12AY.750.000056
ORF1ab/nsp31251T1251TacCacT22B.1.1.2140.000111
ORF1ab/nsp31251T1251TacCacT22B.1.1.3170.000823
ORF1ab/nsp31251T1251TacCacT22B.1.466.20.000782
ORF1ab/nsp31251T1251TacCacT22B.1.5170.000854
ORF1ab/nsp31251T1251TacCacT22B.1.5640.000852
ORF1ab/nsp31251T1251TacCacT22B.1.5990.007299
ORF1ab/nsp31251T1251TacCacT22B.400.000729
ORF1ab/nsp31251T1251TacCacT22P.1.140.000096
ORF1ab/nsp31251T1251TacCacT22Q.30.00029
ORF1ab/nsp31251T1251TacCacT22Q.80.00033
ORF1ab/nsp31251T1251TacCacT11A.2.5.10.004808
ORF1ab/nsp31251T1251TacCacT11AY.120.10.000321
ORF1ab/nsp31251T1251TacCacT11AY.160.00038
ORF1ab/nsp31251T1251TacCacT11AY.190.00114
ORF1ab/nsp31251T1251TacCacT11AY.20.000356
ORF1ab/nsp31251T1251TacCacT11AY.300.000396
ORF1ab/nsp31251T1251TacCacT11AY.4.50.000107
ORF1ab/nsp31251T1251TacCacT11AY.46.40.000165
ORF1ab/nsp31251T1251TacCacT11AY.610.000105
ORF1ab/nsp31251T1251TacCacT11AY.620.000436
ORF1ab/nsp31251T1251TacCacT11AY.690.000187
ORF1ab/nsp31251T1251TacCacT11AY.70.000196
ORF1ab/nsp31251T1251TacCacT11AY.75.10.00018
ORF1ab/nsp31251T1251TacCacT11AY.9.10.000084
ORF1ab/nsp31251T1251TacCacT11AY.980.000079
ORF1ab/nsp31251T1251TacCacT11B.1.1.3060.000438
ORF1ab/nsp31251T1251TacCacT11B.1.1.330.000421
ORF1ab/nsp31251T1251TacCacT11B.1.1.4480.002033
ORF1ab/nsp31251T1251TacCacT11B.1.1.510.001718
ORF1ab/nsp31251T1251TacCacT11B.1.1.5260.003546
ORF1ab/nsp31251T1251TacCacT11B.1.160.160.000929
ORF1ab/nsp31251T1251TacCacT11B.1.177.40.000211
ORF1ab/nsp31251T1251TacCacT11B.1.177.580.001332
ORF1ab/nsp31251T1251TacCacT11B.1.177.70.000165
ORF1ab/nsp31251T1251TacCacT11B.1.177.810.000189
ORF1ab/nsp31251T1251TacCacT11B.1.177.820.000477
ORF1ab/nsp31251T1251TacCacT11B.1.1950.005025
ORF1ab/nsp31251T1251TacCacT11B.1.221.30.000833
ORF1ab/nsp31251T1251TacCacT11B.1.2340.000132
ORF1ab/nsp31251T1251TacCacT11B.1.258.140.00098
ORF1ab/nsp31251T1251TacCacT11B.1.36.100.004785
ORF1ab/nsp31251T1251TacCacT11B.1.4280.00102
ORF1ab/nsp31251T1251TacCacT11B.1.438.10.000107
ORF1ab/nsp31251T1251TacCacT11B.1.5650.00081
ORF1ab/nsp31251T1251TacCacT11B.1.6060.006024
ORF1ab/nsp31251T1251TacCacT11B.1.6280.000352
ORF1ab/nsp31251T1251TacCacT11B.1.6370.000073
ORF1ab/nsp31251T1251TacCacT11B.1.780.008547
ORF1ab/nsp31251T1251TacCacT11B.6.60.000889
ORF1ab/nsp31251T1251TacCacT11C.190.027027
ORF1ab/nsp31251T1251TacCacT11D.20.000075
ORF1ab/nsp31251T1251TacCacT11P.1.120.000484
ORF1ab/nsp31251T1251TacCacT11P.30.001595