CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1251 | T1251T | T2069T | syn | acC | acT | 2170 | 1752 | 0.807373 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251T | T2069T | syn | acC | acA | 2170 | 418 | 0.192627 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251I | T2069I | nonsyn | aCc | aTc | 1863 | 1863 | 1 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251del | T2069del | del | ACC | --- | 593 | 593 | 1 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251N | T2069N | nonsyn | aCc | aAc | 352 | 352 | 1 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251P | T2069P | nonsyn | Acc | Ccc | 32 | 32 | 1 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251A | T2069A | nonsyn | Acc | Gcc | 30 | 30 | 1 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251S | T2069S | nonsyn | aCc | aGc | 4 | 2 | 0.5 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251S | T2069S | nonsyn | Acc | Tcc | 4 | 1 | 0.25 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251S | T2069S | nonsyn | AcC | TcA | 4 | 1 | 0.25 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251K | T2069K | nonsyn | aCC | aAA | 1 | 1 | 1 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251V | T2069V | nonsyn | ACc | GTc | 1 | 1 | 1 | 6470-6472 |
ORF1ab/nsp3 | 1251 | T1251del1 | T2069del1 | del | aCc | a-c | 1 | 1 | 1 | 6470-6472 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1752 | 2170 | All | 0.000335 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 418 | 2170 | All | 0.00008 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1863 | 1863 | All | 0.000356 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 531 | 698 | B.1.1.7 | 0.000475 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 167 | 698 | B.1.1.7 | 0.00015 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 608 | 608 | B.1.351 | 0.018074 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 593 | 593 | All | 0.000113 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 525 | 525 | L.1 | 1 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 352 | 352 | All | 0.000067 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 226 | 226 | B.1.1.7 | 0.000202 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 222 | 222 | B.1.400 | 0.095238 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 177 | 177 | B.1.1.7 | 0.000158 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 120 | 120 | B.1.258 | 0.007986 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 106 | 116 | AY.4 | 0.000165 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 10 | 116 | AY.4 | 0.000016 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 65 | 109 | B.1.617.2 | 0.000245 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 44 | 109 | B.1.617.2 | 0.000166 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 101 | 102 | B.1.2 | 0.000889 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 102 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 101 | 101 | P.1 | 0.001591 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 71 | 71 | AY.43 | 0.000315 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 63 | 65 | AY.99.2 | 0.005806 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 2 | 65 | AY.99.2 | 0.000184 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 63 | 63 | B.1.418 | 1 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 61 | 61 | AY.4 | 0.000095 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 54 | 54 | B.1.617.2 | 0.000203 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 38 | 53 | AY.44 | 0.000231 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 15 | 53 | AY.44 | 0.000091 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 53 | 53 | B.1.2 | 0.000467 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 51 | 51 | AY.3 | 0.000507 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 49 | 49 | P.2 | 0.009145 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 48 | 48 | B.1.243 | 0.00334 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 37 | 45 | AY.102 | 0.000981 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 8 | 45 | AY.102 | 0.000212 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 29 | 38 | AY.25 | 0.000174 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 9 | 38 | AY.25 | 0.000054 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 32 | 38 | AY.39 | 0.000791 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 6 | 38 | AY.39 | 0.000148 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 37 | 37 | AY.44 | 0.000225 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 34 | 34 | AY.47 | 0.001058 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 34 | 34 | AY.5 | 0.000702 |
ORF1ab/nsp3 | 1251 | T1251P | Acc | Ccc | 32 | 32 | All | 0.000006 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 30 | 30 | All | 0.000006 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 30 | 30 | B.1.160 | 0.000936 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 30 | 30 | B.1.527 | 0.111111 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 26 | 26 | AY.4.2 | 0.000564 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 21 | 26 | B.1 | 0.000192 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 5 | 26 | B.1 | 0.000046 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 26 | 26 | P.1 | 0.00041 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 22 | 23 | AY.46.6 | 0.001589 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 23 | AY.46.6 | 0.000072 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 21 | 22 | AY.103 | 0.00013 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 22 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 20 | 20 | B.1 | 0.000183 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 15 | 20 | B.1.177 | 0.000198 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 20 | B.1.177 | 0.000066 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 20 | 20 | B.1.346 | 0.026212 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 19 | 19 | AY.100 | 0.000874 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 19 | 19 | B.1.258 | 0.001264 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 19 | 19 | B.1.526 | 0.000447 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 10 | 18 | AY.43 | 0.000044 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 8 | 18 | AY.43 | 0.000035 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 18 | 18 | AY.75 | 0.001008 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 17 | 17 | AY.9.2 | 0.000624 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 17 | 17 | B.1.2 | 0.00015 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 16 | 16 | AY.29 | 0.000252 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 11 | 16 | B.1.177.77 | 0.007988 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 5 | 16 | B.1.177.77 | 0.003631 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 15 | 15 | AY.25 | 0.00009 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 15 | 15 | AY.6 | 0.000617 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 15 | 15 | B.1.36.29 | 0.00776 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 14 | 14 | AY.3 | 0.000139 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 9 | 14 | B.1.1 | 0.000163 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 14 | B.1.1 | 0.000091 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 14 | 14 | B.1.438.1 | 0.001502 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 13 | 13 | AY.29 | 0.000205 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 13 | 13 | AY.8 | 0.007879 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 13 | 13 | AY.98.1 | 0.00063 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 13 | 13 | B.1 | 0.000119 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 13 | 13 | B.1.427 | 0.000656 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 10 | 13 | B.1.429 | 0.000235 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 3 | 13 | B.1.429 | 0.000071 |
ORF1ab/nsp3 | 1251 | T1251P | Acc | Ccc | 12 | 12 | AY.43 | 0.000053 |
ORF1ab/nsp3 | 1251 | T1251P | Acc | Ccc | 12 | 12 | B.1.617.2 | 0.000045 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 11 | 11 | AY.39.1 | 0.000436 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 11 | 11 | P.1.1 | 0.003494 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 10 | 10 | B.1.429 | 0.000235 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 9 | 9 | AY.103 | 0.000056 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 9 | 9 | AY.3.1 | 0.000767 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 9 | 9 | AY.33 | 0.000601 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 9 | 9 | B.1.1 | 0.000163 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 9 | 9 | B.1.1.216 | 0.008014 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 9 | 9 | B.1.1.222 | 0.001836 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 9 | 9 | B.1.177.86 | 0.001651 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 6 | 8 | AY.33 | 0.000401 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 8 | AY.33 | 0.000134 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 8 | 8 | B.1.1.222 | 0.001632 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 8 | 8 | B.1.1.7 | 0.000007 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 8 | 8 | B.1.617.2 | 0.00003 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 8 | 8 | P.1.15 | 0.001859 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 7 | 7 | AY.74 | 0.00081 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 7 | 7 | B.1.2 | 0.000062 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 7 | 7 | B.1.241 | 0.005682 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 7 | 7 | B.1.596 | 0.00061 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 7 | 7 | C.37 | 0.000812 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 6 | 6 | AY.14 | 0.000528 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 6 | 6 | AY.36 | 0.000889 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 6 | 6 | AY.39 | 0.000148 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 6 | 6 | B.1.1.10 | 0.006689 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 6 | 6 | B.1.1.7 | 0.000005 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 6 | 6 | B.1.177.73 | 0.003398 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 6 | 6 | B.1.526 | 0.000141 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 6 | 6 | B.1.617.1 | 0.000774 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 6 | 6 | B.1.621.1 | 0.003035 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 5 | AY.119 | 0.000177 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 4 | 5 | AY.23 | 0.000279 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 5 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1251 | T1251P | Acc | Ccc | 5 | 5 | AY.39 | 0.000124 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 5 | AY.84 | 0.002187 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 5 | B.1.1.307 | 0.012658 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 5 | 5 | B.1.160 | 0.000156 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 5 | B.1.525 | 0.000566 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 5 | 5 | B.1.526 | 0.000118 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 4 | 5 | B.1.526 | 0.000094 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 5 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 5 | 5 | B.1.594 | 0.15625 |
ORF1ab/nsp3 | 1251 | T1251S | aCc | aGc | 2 | 4 | All | 0 |
ORF1ab/nsp3 | 1251 | T1251S | Acc | Tcc | 1 | 4 | All | 0 |
ORF1ab/nsp3 | 1251 | T1251S | AcC | TcA | 1 | 4 | All | 0 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 4 | 4 | AY.103 | 0.000025 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 4 | 4 | AY.13 | 0.000644 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 4 | 4 | AY.34 | 0.000388 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 4 | 4 | AY.42 | 0.000161 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 4 | AY.42 | 0.000121 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 4 | AY.42 | 0.00004 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 4 | 4 | AY.44 | 0.000024 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 4 | 4 | AY.46.6 | 0.000289 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 4 | B.1.1.294 | 0.002532 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 2 | 4 | B.1.1.294 | 0.002532 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 4 | 4 | B.1.1.464 | 0.005891 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 4 | 4 | B.1.1.50 | 0.002716 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 4 | 4 | B.1.1.519 | 0.000159 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 4 | 4 | B.1.160 | 0.000125 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 4 | 4 | B.1.240 | 0.000862 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 4 | 4 | B.1.36 | 0.000584 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 4 | 4 | C.1 | 0.009569 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | AY.100 | 0.000138 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | AY.21 | 0.005693 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 3 | AY.45 | 0.000243 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 3 | AY.45 | 0.000122 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 3 | 3 | AY.47 | 0.000093 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | AY.5 | 0.000062 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 3 | 3 | AY.54 | 0.000286 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | AY.7.1 | 0.000338 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 3 | 3 | B.1 | 0.000027 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | B.1.1.10 | 0.003344 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | B.1.1.348 | 0.002389 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | B.1.1.519 | 0.000119 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | B.1.1.528 | 0.014423 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 3 | 3 | B.1.177 | 0.00004 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 3 | B.1.177.60 | 0.000437 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 3 | B.1.177.60 | 0.000218 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 3 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 3 | B.1.221 | 0.000071 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 2 | 3 | B.1.351 | 0.000059 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 3 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 3 | 3 | B.1.36.18 | 0.001261 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | B.1.36.8 | 0.003 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 3 | 3 | B.1.362 | 0.004622 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 3 | 3 | B.1.429 | 0.000071 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | C.36 | 0.002732 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 3 | 3 | C.37 | 0.000348 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 3 | 3 | P.1 | 0.000047 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 3 | 3 | P.1.7 | 0.000958 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 3 | 3 | R.1 | 0.00027 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | A.3 | 0.004193 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | AY.102 | 0.000053 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | AY.109 | 0.001479 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 2 | 2 | AY.117 | 0.000169 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | AY.119 | 0.000071 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | AY.120 | 0.000074 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | AY.26 | 0.000057 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | AY.4.2 | 0.000043 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 2 | 2 | AY.44 | 0.000012 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | AY.45 | 0.000243 |
ORF1ab/nsp3 | 1251 | T1251P | Acc | Ccc | 2 | 2 | AY.46 | 0.000208 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 2 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 2 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 2 | 2 | AY.47 | 0.000062 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 2 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 2 | AY.55 | 0.000917 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | AY.7 | 0.000392 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 2 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 2 | AY.75 | 0.000056 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 2 | 2 | B.1.1 | 0.000036 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | B.1.1.317 | 0.000823 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | B.1.263 | 0.095238 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | B.1.427 | 0.000101 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | B.1.517 | 0.000854 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | B.1.564 | 0.000852 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | B.1.599 | 0.007299 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | B.40 | 0.000729 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 2 | 2 | P.1.14 | 0.000096 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 2 | 2 | Q.8 | 0.00033 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1251 | T1251K | aCC | aAA | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | A.2.5.1 | 0.004808 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | A.23.1 | 0.000704 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | A.27 | 0.001656 |
ORF1ab/nsp3 | 1251 | T1251del1 | aCc | a-c | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1251 | T1251V | ACc | GTc | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1251 | T1251K | aCC | aAA | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1251 | T1251P | Acc | Ccc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.106 | 0.000335 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | AY.11 | 0.001339 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.118 | 0.000063 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.120.1 | 0.000321 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | AY.121 | 0.000135 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.19 | 0.00114 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.2 | 0.000356 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.37 | 0.000316 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.39.1 | 0.00004 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.4.5 | 0.000107 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.47 | 0.000031 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | AZ.4 | 0.003356 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | B | 0.000128 |
ORF1ab/nsp3 | 1251 | T1251S | aCc | aGc | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1251 | T1251del1 | aCc | a-c | 1 | 1 | B.1 | 0.000009 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.1.133 | 0.008475 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.15 | 0.013514 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.214 | 0.000055 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.216 | 0.00089 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.1.306 | 0.000438 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.369 | 0.000446 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.1.448 | 0.002033 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.1.51 | 0.001718 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.1.526 | 0.003546 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.1.63 | 0.000386 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | B.1.1.70 | 0.000341 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.126 | 0.001276 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.160.16 | 0.000929 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | B.1.164 | 0.014925 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.177.21 | 0.000076 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | B.1.177.35 | 0.000691 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.177.36 | 0.016129 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.177.58 | 0.001332 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.177.81 | 0.000189 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.195 | 0.005025 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.221.3 | 0.000833 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.234 | 0.000132 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.258.14 | 0.00098 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.36.10 | 0.004785 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.362 | 0.001541 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | B.1.367 | 0.000792 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.428 | 0.00102 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | B.1.470 | 0.001404 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.523 | 0.002451 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.524 | 0.001406 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.561 | 0.000397 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.606 | 0.006024 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1251 | T1251S | aCc | aGc | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | B.1.621 | 0.000089 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp3 | 1251 | T1251N | aCc | aAc | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 1251 | T1251del | ACC | --- | 1 | 1 | B.1.637 | 0.000073 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.1.78 | 0.008547 |
ORF1ab/nsp3 | 1251 | T1251S | Acc | Tcc | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | B.6.6 | 0.000889 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | C.1.2 | 0.004255 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | C.19 | 0.027027 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | C.23 | 0.005814 |
ORF1ab/nsp3 | 1251 | T1251S | AcC | TcA | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 1 | 1 | C.38 | 0.008065 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | C.40 | 0.027778 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 1251 | T1251V | ACc | GTc | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | P.1.1 | 0.000318 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 1251 | T1251A | Acc | Gcc | 1 | 1 | P.1.14 | 0.000048 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp3 | 1251 | T1251T | acC | acA | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp3 | 1251 | T1251I | aCc | aTc | 1 | 1 | Q.8 | 0.000165 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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