CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1244 & Codon = ctA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31244L1244LL2062LsynctTctA224430.1919646449-6451

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31244L1244LctTctA43224All0.000008
ORF1ab/nsp31244L1244LctTctA665AY.40.000009
ORF1ab/nsp31244L1244LctTctA520B.1.1.70.000004
ORF1ab/nsp31244L1244LctTctA1011AY.290.000158
ORF1ab/nsp31244L1244LctTctA58B.1.20.000044
ORF1ab/nsp31244L1244LctTctA24AY.1030.000012
ORF1ab/nsp31244L1244LctTctA34AY.440.000018
ORF1ab/nsp31244L1244LctTctA13AY.390.000025
ORF1ab/nsp31244L1244LctTctA33P.1.140.000143
ORF1ab/nsp31244L1244LctTctA12AY.4.20.000022
ORF1ab/nsp31244L1244LctTctA22B.1.36.90.006431
ORF1ab/nsp31244L1244LctTctA110.055556
ORF1ab/nsp31244L1244LctTctA11AY.4.50.000107
ORF1ab/nsp31244L1244LctTctA11B.1.2580.000067
ORF1ab/nsp31244L1244LctTctA11B.1.36.340.021277
ORF1ab/nsp31244L1244LctTctA11C.370.000116