CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1244 & Codon = Att

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31244L1244IL2062InonsynCttAtt24424416449-6451

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31244L1244ICttAtt244244All0.000047
ORF1ab/nsp31244L1244ICttAtt139139AY.40.000216
ORF1ab/nsp31244L1244ICttAtt2323AY.4.50.002472
ORF1ab/nsp31244L1244ICttAtt1212B.1.617.20.000045
ORF1ab/nsp31244L1244ICttAtt77B.1.1.70.000006
ORF1ab/nsp31244L1244ICttAtt66AY.470.000187
ORF1ab/nsp31244L1244ICttAtt66B.1.20.000053
ORF1ab/nsp31244L1244ICttAtt55AY.90.000338
ORF1ab/nsp31244L1244ICttAtt44AY.80.002424
ORF1ab/nsp31244L1244ICttAtt44B.10.000037
ORF1ab/nsp31244L1244ICttAtt44B.1.1.3060.001754
ORF1ab/nsp31244L1244ICttAtt33AY.430.000013
ORF1ab/nsp31244L1244ICttAtt33B.1.1.2540.033708
ORF1ab/nsp31244L1244ICttAtt22AY.1030.000012
ORF1ab/nsp31244L1244ICttAtt22AY.1200.000074
ORF1ab/nsp31244L1244ICttAtt22AY.250.000012
ORF1ab/nsp31244L1244ICttAtt22AY.580.001815
ORF1ab/nsp31244L1244ICttAtt22B.1.177.600.000437
ORF1ab/nsp31244L1244ICttAtt11A0.000387
ORF1ab/nsp31244L1244ICttAtt11AY.1210.000135
ORF1ab/nsp31244L1244ICttAtt11AY.170.008197
ORF1ab/nsp31244L1244ICttAtt11AY.240.000431
ORF1ab/nsp31244L1244ICttAtt11AY.260.000028
ORF1ab/nsp31244L1244ICttAtt11AY.30.00001
ORF1ab/nsp31244L1244ICttAtt11AY.330.000067
ORF1ab/nsp31244L1244ICttAtt11AY.420.00004
ORF1ab/nsp31244L1244ICttAtt11AY.520.000814
ORF1ab/nsp31244L1244ICttAtt11AY.870.000833
ORF1ab/nsp31244L1244ICttAtt11B0.000128
ORF1ab/nsp31244L1244ICttAtt11B.1.1.5190.00004
ORF1ab/nsp31244L1244ICttAtt11B.1.3010.005917
ORF1ab/nsp31244L1244ICttAtt11B.1.3510.00003
ORF1ab/nsp31244L1244ICttAtt11B.1.5960.000087
ORF1ab/nsp31244L1244ICttAtt11B.1.5990.00365
ORF1ab/nsp31244L1244ICttAtt11B.1.6230.000536
ORF1ab/nsp31244L1244ICttAtt11P.1.140.000048