CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1242

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31242D1242DD2060DsyngaCgaT5025502516443-6445
ORF1ab/nsp31242D1242YD2060YnonsynGacTac9789760.9979556443-6445
ORF1ab/nsp31242D1242YD2060YnonsynGaCTaT97820.002044996443-6445
ORF1ab/nsp31242D1242delD2060deldelGAC---58158116443-6445
ORF1ab/nsp31242D1242ND2060NnonsynGacAac24524516443-6445
ORF1ab/nsp31242D1242GD2060GnonsyngAcgGc1051040.9904766443-6445
ORF1ab/nsp31242D1242GD2060GnonsyngACgGT10510.009523816443-6445
ORF1ab/nsp31242D1242ED2060EnonsyngaCgaA95910.9578956443-6445
ORF1ab/nsp31242D1242ED2060EnonsyngaCgaG9540.04210536443-6445
ORF1ab/nsp31242D1242AD2060AnonsyngAcgCc141416443-6445
ORF1ab/nsp31242D1242VD2060VnonsyngAcgTc4416443-6445
ORF1ab/nsp31242D1242HD2060HnonsynGacCac4416443-6445
ORF1ab/nsp31242D1242LD2060LnonsynGACCTA210.56443-6445
ORF1ab/nsp31242D1242LD2060LnonsynGACCTG210.56443-6445
ORF1ab/nsp31242D1242RD2060RnonsynGACAGA1116443-6445

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31242D1242DgaCgaT50255025All0.000961
ORF1ab/nsp31242D1242DgaCgaT10241024B.1.1.2770.776935
ORF1ab/nsp31242D1242YGacTac976978All0.000187
ORF1ab/nsp31242D1242YGaCTaT2978All0
ORF1ab/nsp31242D1242DgaCgaT706706B.1.617.20.002658
ORF1ab/nsp31242D1242delGAC---581581All0.000111
ORF1ab/nsp31242D1242DgaCgaT544544AY.430.00241
ORF1ab/nsp31242D1242delGAC---525525L.11
ORF1ab/nsp31242D1242DgaCgaT448448B.1.1.70.000401
ORF1ab/nsp31242D1242DgaCgaT289289B.1.3980.860119
ORF1ab/nsp31242D1242NGacAac245245All0.000047
ORF1ab/nsp31242D1242YGacTac224224AY.1030.001391
ORF1ab/nsp31242D1242DgaCgaT162162K.31
ORF1ab/nsp31242D1242DgaCgaT161161AY.250.000968
ORF1ab/nsp31242D1242YGacTac127127B.1.1.70.000114
ORF1ab/nsp31242D1242DgaCgaT114114B.10.001044
ORF1ab/nsp31242D1242GgAcgGc104105All0.00002
ORF1ab/nsp31242D1242GgACgGT1105All0
ORF1ab/nsp31242D1242DgaCgaT103103B.1.1.5190.00409
ORF1ab/nsp31242D1242DgaCgaT9797AY.30.000965
ORF1ab/nsp31242D1242EgaCgaA9195All0.000017
ORF1ab/nsp31242D1242EgaCgaG495All0.000001
ORF1ab/nsp31242D1242DgaCgaT8989B.1.1.260.465969
ORF1ab/nsp31242D1242DgaCgaT8787AY.40.000135
ORF1ab/nsp31242D1242DgaCgaT8787B.1.5880.079163
ORF1ab/nsp31242D1242YGacTac6666AY.40.000103
ORF1ab/nsp31242D1242DgaCgaT6565B.1.10.001179
ORF1ab/nsp31242D1242DgaCgaT6565B.1.5690.942029
ORF1ab/nsp31242D1242YGacTac6464AY.430.000284
ORF1ab/nsp31242D1242DgaCgaT6262AY.1030.000385
ORF1ab/nsp31242D1242EgaCgaA6262AY.250.000373
ORF1ab/nsp31242D1242DgaCgaT6161B.1.2340.008049
ORF1ab/nsp31242D1242DgaCgaT6060AY.440.000365
ORF1ab/nsp31242D1242DgaCgaT4444B.1.5960.003834
ORF1ab/nsp31242D1242DgaCgaT4242AY.1000.001932
ORF1ab/nsp31242D1242DgaCgaT4141AY.390.001013
ORF1ab/nsp31242D1242DgaCgaT4141B.1.4290.000965
ORF1ab/nsp31242D1242DgaCgaT3636AY.4.20.000781
ORF1ab/nsp31242D1242DgaCgaT3434A.2.50.016966
ORF1ab/nsp31242D1242YGacTac3434B.1.617.20.000128
ORF1ab/nsp31242D1242DgaCgaT3333AY.420.001328
ORF1ab/nsp31242D1242DgaCgaT3232B.1.1.2840.003437
ORF1ab/nsp31242D1242NGacAac3232B.1.1.70.000029
ORF1ab/nsp31242D1242YGacTac3131AY.290.000489
ORF1ab/nsp31242D1242NGacAac3131B.1.4260.031282
ORF1ab/nsp31242D1242YGacTac2929B.10.000266
ORF1ab/nsp31242D1242YGacTac2929B.1.10.000526
ORF1ab/nsp31242D1242YGacTac2727AY.330.001803
ORF1ab/nsp31242D1242GgAcgGc2525B.1.617.20.000094
ORF1ab/nsp31242D1242DgaCgaT2323B.1.258.170.002391
ORF1ab/nsp31242D1242NGacAac2222AY.1020.000583
ORF1ab/nsp31242D1242YGacTac2121AY.260.000595
ORF1ab/nsp31242D1242DgaCgaT2121AY.640.0125
ORF1ab/nsp31242D1242DgaCgaT2121B.1.360.003064
ORF1ab/nsp31242D1242YGacTac2020AY.440.000122
ORF1ab/nsp31242D1242YGacTac1919AY.420.000764
ORF1ab/nsp31242D1242YGacTac1818AY.46.60.0013
ORF1ab/nsp31242D1242NGacAac1818B.1.617.20.000068
ORF1ab/nsp31242D1242NGacAac1717B.1.6370.001242
ORF1ab/nsp31242D1242NGacAac1616AY.480.007442
ORF1ab/nsp31242D1242YGacTac1515AY.250.00009
ORF1ab/nsp31242D1242AgAcgCc1414All0.000003
ORF1ab/nsp31242D1242DgaCgaT1414AY.200.000544
ORF1ab/nsp31242D1242GgAcgGc1414B.10.000128
ORF1ab/nsp31242D1242NGacAac1414B.1.1600.000437
ORF1ab/nsp31242D1242YGacTac1414B.1.20.000123
ORF1ab/nsp31242D1242YGacTac1414B.1.4290.000329
ORF1ab/nsp31242D1242DgaCgaT1414B.1.6370.001023
ORF1ab/nsp31242D1242NGacAac1313AY.30.000129
ORF1ab/nsp31242D1242YGacTac1313AY.9.20.000477
ORF1ab/nsp31242D1242delGAC---1313B.10.000119
ORF1ab/nsp31242D1242DgaCgaT1313B.1.5260.000306
ORF1ab/nsp31242D1242DgaCgaT1313B.1.6210.001151
ORF1ab/nsp31242D1242DgaCgaT1212AY.260.00034
ORF1ab/nsp31242D1242GgAcgGc1212B.1.1.70.000011
ORF1ab/nsp31242D1242DgaCgaT1212C.340.444444
ORF1ab/nsp31242D1242GgAcgGc1111AY.1000.000506
ORF1ab/nsp31242D1242DgaCgaT1111AY.50.000227
ORF1ab/nsp31242D1242YGacTac1010AY.200.000389
ORF1ab/nsp31242D1242NGacAac1010AY.40.000016
ORF1ab/nsp31242D1242DgaCgaT1010AY.750.00056
ORF1ab/nsp31242D1242DgaCgaT99AY.1170.000761
ORF1ab/nsp31242D1242YGacTac99AY.1180.000564
ORF1ab/nsp31242D1242DgaCgaT99AY.60.00037
ORF1ab/nsp31242D1242delGAC---99B.1.1.70.000008
ORF1ab/nsp31242D1242DgaCgaT99B.1.1770.000119
ORF1ab/nsp31242D1242DgaCgaT99B.1.2210.000639
ORF1ab/nsp31242D1242YGacTac99B.1.3510.000268
ORF1ab/nsp31242D1242DgaCgaT99B.1.5950.002349
ORF1ab/nsp31242D1242YGacTac99P.10.000142
ORF1ab/nsp31242D1242DgaCgaT99P.10.000142
ORF1ab/nsp31242D1242DgaCgaT88AY.1190.000282
ORF1ab/nsp31242D1242DgaCgaT88AY.230.000558
ORF1ab/nsp31242D1242DgaCgaT88AY.460.000833
ORF1ab/nsp31242D1242DgaCgaT88AY.5.40.002214
ORF1ab/nsp31242D1242NGacAac88B.10.000073
ORF1ab/nsp31242D1242NGacAac88B.1.1.2160.007124
ORF1ab/nsp31242D1242DgaCgaT88B.1.1600.00025
ORF1ab/nsp31242D1242DgaCgaT88B.1.177.540.004851
ORF1ab/nsp31242D1242DgaCgaT88B.1.20.00007
ORF1ab/nsp31242D1242DgaCgaT88B.1.4270.000404
ORF1ab/nsp31242D1242YGacTac77AY.1020.000186
ORF1ab/nsp31242D1242NGacAac77AY.39.10.000277
ORF1ab/nsp31242D1242YGacTac77AY.4.50.000752
ORF1ab/nsp31242D1242YGacTac77AY.99.10.01087
ORF1ab/nsp31242D1242YGacTac77B.1.258.220.018667
ORF1ab/nsp31242D1242YGacTac66AY.1110.001099
ORF1ab/nsp31242D1242DgaCgaT66AY.1210.000812
ORF1ab/nsp31242D1242delGAC---66B.1.1.100.006689
ORF1ab/nsp31242D1242DgaCgaT66B.1.1.3180.001811
ORF1ab/nsp31242D1242YGacTac66B.1.5700.017647
ORF1ab/nsp31242D1242GgAcgGc55AY.250.00003
ORF1ab/nsp31242D1242YGacTac55AY.280.009452
ORF1ab/nsp31242D1242DgaCgaT55AY.470.000156
ORF1ab/nsp31242D1242YGacTac55AY.610.000524
ORF1ab/nsp31242D1242YGacTac55B.1.1.3060.002192
ORF1ab/nsp31242D1242AgAcgCc55B.1.1.70.000004
ORF1ab/nsp31242D1242DgaCgaT55B.1.1490.017123
ORF1ab/nsp31242D1242YGacTac55B.1.1600.000156
ORF1ab/nsp31242D1242DgaCgaT55B.1.160.280.01462
ORF1ab/nsp31242D1242DgaCgaT55B.1.4520.068493
ORF1ab/nsp31242D1242DgaCgaT55B.1.5250.000566
ORF1ab/nsp31242D1242YGacTac55B.1.617.30.014925
ORF1ab/nsp31242D1242YGacTac55C.370.00058
ORF1ab/nsp31242D1242DgaCgaT55C.370.00058
ORF1ab/nsp31242D1242DgaCgaT55P.1.140.000239
ORF1ab/nsp31242D1242HGacCac44All0.000001
ORF1ab/nsp31242D1242VgAcgTc44All0.000001
ORF1ab/nsp31242D1242DgaCgaT44AY.1100.000451
ORF1ab/nsp31242D1242NGacAac44AY.1130.00057
ORF1ab/nsp31242D1242DgaCgaT44AY.1160.001147
ORF1ab/nsp31242D1242NGacAac44AY.250.000024
ORF1ab/nsp31242D1242DgaCgaT44AY.360.000593
ORF1ab/nsp31242D1242NGacAac44AY.390.000099
ORF1ab/nsp31242D1242delGAC---44AY.40.000006
ORF1ab/nsp31242D1242EgaCgaA24AY.40.000003
ORF1ab/nsp31242D1242EgaCgaG24AY.40.000003
ORF1ab/nsp31242D1242DgaCgaT44AY.450.000487
ORF1ab/nsp31242D1242YGacTac44AY.540.000381
ORF1ab/nsp31242D1242DgaCgaT44AY.670.001857
ORF1ab/nsp31242D1242DgaCgaT44B.1.1.250.002274
ORF1ab/nsp31242D1242YGacTac44B.1.1.3050.015444
ORF1ab/nsp31242D1242delGAC---44B.1.1.5190.000159
ORF1ab/nsp31242D1242DgaCgaT44B.1.177.40.000844
ORF1ab/nsp31242D1242DgaCgaT44B.1.177.580.005326
ORF1ab/nsp31242D1242EgaCgaA44B.1.20.000035
ORF1ab/nsp31242D1242EgaCgaA44B.1.2580.000266
ORF1ab/nsp31242D1242DgaCgaT44B.1.2580.000266
ORF1ab/nsp31242D1242EgaCgaG24B.1.617.20.000008
ORF1ab/nsp31242D1242EgaCgaA24B.1.617.20.000008
ORF1ab/nsp31242D1242YGacTac44C.36.30.002269
ORF1ab/nsp31242D1242YGacTac44P.1.20.004624
ORF1ab/nsp31242D1242DgaCgaT33AY.1200.000112
ORF1ab/nsp31242D1242DgaCgaT33AY.120.2.10.001495
ORF1ab/nsp31242D1242DgaCgaT33AY.290.000047
ORF1ab/nsp31242D1242YGacTac33AY.30.00003
ORF1ab/nsp31242D1242DgaCgaT33AY.330.0002
ORF1ab/nsp31242D1242YGacTac33AY.390.000074
ORF1ab/nsp31242D1242DgaCgaT33AY.410.000882
ORF1ab/nsp31242D1242GgAcgGc33AY.430.000013
ORF1ab/nsp31242D1242DgaCgaT33AY.46.40.000494
ORF1ab/nsp31242D1242YGacTac33AY.680.000821
ORF1ab/nsp31242D1242YGacTac33AY.75.10.000541
ORF1ab/nsp31242D1242YGacTac33AY.90.000203
ORF1ab/nsp31242D1242DgaCgaT33AY.910.002191
ORF1ab/nsp31242D1242DgaCgaT33B0.000383
ORF1ab/nsp31242D1242DgaCgaT33B.1.1.100.003344
ORF1ab/nsp31242D1242DgaCgaT33B.1.1.2140.000166
ORF1ab/nsp31242D1242YGacTac33B.1.1.5190.000119
ORF1ab/nsp31242D1242YGacTac33B.1.1.700.001023
ORF1ab/nsp31242D1242YGacTac33B.1.1770.00004
ORF1ab/nsp31242D1242DgaCgaT33B.1.177.70.000495
ORF1ab/nsp31242D1242YGacTac33B.1.2580.0002
ORF1ab/nsp31242D1242AgAcgCc33B.1.2580.0002
ORF1ab/nsp31242D1242GgAcgGc33B.1.5260.000071
ORF1ab/nsp31242D1242YGacTac33B.1.5820.001472
ORF1ab/nsp31242D1242DgaCgaT33B.1.617.10.000387
ORF1ab/nsp31242D1242GgAcgGc33P.1.140.000143
ORF1ab/nsp31242D1242DgaCgaT33P.1.70.000958
ORF1ab/nsp31242D1242NGacAac22A.2.50.000998
ORF1ab/nsp31242D1242LGACCTA12All0
ORF1ab/nsp31242D1242LGACCTG12All0
ORF1ab/nsp31242D1242DgaCgaT22AY.1020.000053
ORF1ab/nsp31242D1242GgAcgGc22AY.1030.000012
ORF1ab/nsp31242D1242YGacTac22AY.1060.00067
ORF1ab/nsp31242D1242DgaCgaT22AY.1130.000285
ORF1ab/nsp31242D1242DgaCgaT22AY.1140.000462
ORF1ab/nsp31242D1242GgAcgGc22AY.1180.000125
ORF1ab/nsp31242D1242EgaCgaA22AY.260.000057
ORF1ab/nsp31242D1242GgAcgGc22AY.30.00002
ORF1ab/nsp31242D1242NGacAac22AY.4.20.000043
ORF1ab/nsp31242D1242YGacTac22AY.4.20.000043
ORF1ab/nsp31242D1242EgaCgaA22AY.440.000012
ORF1ab/nsp31242D1242YGacTac22AY.470.000062
ORF1ab/nsp31242D1242delGAC---22AY.470.000062
ORF1ab/nsp31242D1242YGacTac22AY.710.00095
ORF1ab/nsp31242D1242EgaCgaA22AY.75.10.000361
ORF1ab/nsp31242D1242DgaCgaT22AY.90.000135
ORF1ab/nsp31242D1242YGacTac22AY.9.10.000167
ORF1ab/nsp31242D1242DgaCgaT22AY.98.10.000097
ORF1ab/nsp31242D1242DgaCgaT22AY.990.002099
ORF1ab/nsp31242D1242GgAcgGc22B.1.10.000036
ORF1ab/nsp31242D1242delGAC---22B.1.10.000036
ORF1ab/nsp31242D1242YGacTac22B.1.1.2220.000408
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.2400.00939
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.280.000622
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.3160.00185
ORF1ab/nsp31242D1242DgaCgaT22B.1.1.3260.003521
ORF1ab/nsp31242D1242EgaCgaA22B.1.1.70.000002
ORF1ab/nsp31242D1242NGacAac22B.1.160.140.004237
ORF1ab/nsp31242D1242GgAcgGc22B.1.20.000018
ORF1ab/nsp31242D1242NGacAac22B.1.20.000018
ORF1ab/nsp31242D1242YGacTac22B.1.2430.000139
ORF1ab/nsp31242D1242DgaCgaT22B.1.2430.000139
ORF1ab/nsp31242D1242NGacAac22B.1.36.310.003503
ORF1ab/nsp31242D1242DgaCgaT22B.1.3960.001411
ORF1ab/nsp31242D1242DgaCgaT22B.1.4090.001563
ORF1ab/nsp31242D1242YGacTac22B.1.4280.002041
ORF1ab/nsp31242D1242DgaCgaT22B.1.438.10.000215
ORF1ab/nsp31242D1242DgaCgaT22B.1.4800.004975
ORF1ab/nsp31242D1242NGacAac22B.1.5260.000047
ORF1ab/nsp31242D1242YGacTac22B.1.5370.04
ORF1ab/nsp31242D1242DgaCgaT22B.1.5750.000607
ORF1ab/nsp31242D1242NGacAac22B.1.5960.000174
ORF1ab/nsp31242D1242YGacTac22B.1.617.10.000258
ORF1ab/nsp31242D1242DgaCgaT22B.130.090909
ORF1ab/nsp31242D1242DgaCgaT22D.20.00015
ORF1ab/nsp31242D1242DgaCgaT22K.10.047619
ORF1ab/nsp31242D1242NGacAac22P.1.140.000096
ORF1ab/nsp31242D1242NGacAac22P.1.20.002312
ORF1ab/nsp31242D1242YGacTac22P.1.40.001953
ORF1ab/nsp31242D1242YGacTac22P.20.000373
ORF1ab/nsp31242D1242NGacAac110.055556
ORF1ab/nsp31242D1242DgaCgaT11A.20.000662
ORF1ab/nsp31242D1242GgAcgGc11A.2.40.003367
ORF1ab/nsp31242D1242DgaCgaT11A.2.5.10.004808
ORF1ab/nsp31242D1242YGacTac11A.23.10.000704
ORF1ab/nsp31242D1242DgaCgaT11AD.20.000219
ORF1ab/nsp31242D1242RGACAGA11All0
ORF1ab/nsp31242D1242YGacTac11AY.1000.000046
ORF1ab/nsp31242D1242DgaCgaT11AY.1010.00049
ORF1ab/nsp31242D1242NGacAac11AY.1030.000006
ORF1ab/nsp31242D1242NGacAac11AY.1040.001984
ORF1ab/nsp31242D1242DgaCgaT11AY.1050.000643
ORF1ab/nsp31242D1242YGacTac11AY.110.001339
ORF1ab/nsp31242D1242DgaCgaT11AY.1110.000183
ORF1ab/nsp31242D1242GgAcgGc11AY.1130.000142
ORF1ab/nsp31242D1242GgAcgGc11AY.1170.000085
ORF1ab/nsp31242D1242GgAcgGc11AY.1190.000035
ORF1ab/nsp31242D1242YGacTac11AY.1190.000035
ORF1ab/nsp31242D1242NGacAac11AY.1200.000037
ORF1ab/nsp31242D1242DgaCgaT11AY.120.10.000321
ORF1ab/nsp31242D1242GgAcgGc11AY.140.000088
ORF1ab/nsp31242D1242YGacTac11AY.140.000088
ORF1ab/nsp31242D1242delGAC---11AY.140.000088
ORF1ab/nsp31242D1242GgAcgGc11AY.16.10.00047
ORF1ab/nsp31242D1242NGacAac11AY.230.00007
ORF1ab/nsp31242D1242delGAC---11AY.250.000006
ORF1ab/nsp31242D1242HGacCac11AY.250.000006
ORF1ab/nsp31242D1242AgAcgCc11AY.260.000028
ORF1ab/nsp31242D1242HGacCac11AY.270.000065
ORF1ab/nsp31242D1242EgaCgaA11AY.30.00001
ORF1ab/nsp31242D1242DgaCgaT11AY.340.000097
ORF1ab/nsp31242D1242GgAcgGc11AY.34.10.00051
ORF1ab/nsp31242D1242YGacTac11AY.360.000148
ORF1ab/nsp31242D1242EgaCgaA11AY.390.000025
ORF1ab/nsp31242D1242GgACgGT11AY.390.000025
ORF1ab/nsp31242D1242DgaCgaT11AY.39.10.00004
ORF1ab/nsp31242D1242GgAcgGc11AY.40.000002
ORF1ab/nsp31242D1242LGACCTA11AY.40.000002
ORF1ab/nsp31242D1242delGAC---11AY.4.50.000107
ORF1ab/nsp31242D1242DgaCgaT11AY.4.50.000107
ORF1ab/nsp31242D1242AgAcgCc11AY.420.00004
ORF1ab/nsp31242D1242AgAcgCc11AY.430.000004
ORF1ab/nsp31242D1242NGacAac11AY.430.000004
ORF1ab/nsp31242D1242GgAcgGc11AY.440.000006
ORF1ab/nsp31242D1242RGACAGA11AY.440.000006
ORF1ab/nsp31242D1242NGacAac11AY.460.000104
ORF1ab/nsp31242D1242YGacTac11AY.460.000104
ORF1ab/nsp31242D1242NGacAac11AY.46.50.000198
ORF1ab/nsp31242D1242DgaCgaT11AY.46.50.000198
ORF1ab/nsp31242D1242GgAcgGc11AY.470.000031
ORF1ab/nsp31242D1242NGacAac11AY.470.000031
ORF1ab/nsp31242D1242DgaCgaT11AY.520.000814
ORF1ab/nsp31242D1242EgaCgaA11AY.570.000656
ORF1ab/nsp31242D1242DgaCgaT11AY.580.000907
ORF1ab/nsp31242D1242YGacTac11AY.60.000041
ORF1ab/nsp31242D1242GgAcgGc11AY.610.000105
ORF1ab/nsp31242D1242DgaCgaT11AY.610.000105
ORF1ab/nsp31242D1242YGacTac11AY.620.000436
ORF1ab/nsp31242D1242delGAC---11AY.660.00107
ORF1ab/nsp31242D1242YGacTac11AY.670.000464
ORF1ab/nsp31242D1242DgaCgaT11AY.70.000196
ORF1ab/nsp31242D1242NGacAac11AY.70.000196
ORF1ab/nsp31242D1242DgaCgaT11AY.710.000475
ORF1ab/nsp31242D1242YGacTac11AY.730.000665
ORF1ab/nsp31242D1242GgAcgGc11AY.870.000833
ORF1ab/nsp31242D1242GgAcgGc11AY.880.000884
ORF1ab/nsp31242D1242DgaCgaT11AY.890.004902
ORF1ab/nsp31242D1242DgaCgaT11AY.9.10.000084
ORF1ab/nsp31242D1242DgaCgaT11AY.9.20.000037
ORF1ab/nsp31242D1242DgaCgaT11AY.920.000287
ORF1ab/nsp31242D1242DgaCgaT11AY.980.000079
ORF1ab/nsp31242D1242delGAC---11AY.98.10.000048
ORF1ab/nsp31242D1242delGAC---11AY.990.001049
ORF1ab/nsp31242D1242YGacTac11AY.99.20.000092
ORF1ab/nsp31242D1242YGacTac11B0.000128
ORF1ab/nsp31242D1242delGAC---11B.1.1.1330.008475
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.1640.005155
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.1760.000439
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.1890.001513
ORF1ab/nsp31242D1242YGacTac11B.1.1.1890.001513
ORF1ab/nsp31242D1242YGacTac11B.1.1.2140.000055
ORF1ab/nsp31242D1242YGacTac11B.1.1.2160.00089
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.2220.000204
ORF1ab/nsp31242D1242HGacCac11B.1.1.250.000569
ORF1ab/nsp31242D1242EgaCgaA11B.1.1.250.000569
ORF1ab/nsp31242D1242GgAcgGc11B.1.1.280.000311
ORF1ab/nsp31242D1242YGacTac11B.1.1.280.000311
ORF1ab/nsp31242D1242YGacTac11B.1.1.2850.006536
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.2940.001266
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.3110.000358
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.3120.001912
ORF1ab/nsp31242D1242YGacTac11B.1.1.3170.000412
ORF1ab/nsp31242D1242YGacTac11B.1.1.3340.016393
ORF1ab/nsp31242D1242delGAC---11B.1.1.3480.000796
ORF1ab/nsp31242D1242NGacAac11B.1.1.3520.03125
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.3720.000689
ORF1ab/nsp31242D1242GgAcgGc11B.1.1.4200.001006
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.4320.001266
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.4350.034483
ORF1ab/nsp31242D1242LGACCTG11B.1.1.460.004367
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.500.000679
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.5170.006803
ORF1ab/nsp31242D1242YGacTac11B.1.1.5180.006329
ORF1ab/nsp31242D1242GgAcgGc11B.1.1.5190.00004
ORF1ab/nsp31242D1242VgAcgTc11B.1.1.5210.005348
ORF1ab/nsp31242D1242DgaCgaT11B.1.1.5250.005464
ORF1ab/nsp31242D1242HGacCac11B.1.1.70.000001
ORF1ab/nsp31242D1242EgaCgaA11B.1.1.700.000341
ORF1ab/nsp31242D1242DgaCgaT11B.1.120.008
ORF1ab/nsp31242D1242DgaCgaT11B.1.130.002375
ORF1ab/nsp31242D1242VgAcgTc11B.1.1600.000031
ORF1ab/nsp31242D1242DgaCgaT11B.1.160.240.004425
ORF1ab/nsp31242D1242delGAC---11B.1.1770.000013
ORF1ab/nsp31242D1242NGacAac11B.1.1770.000013
ORF1ab/nsp31242D1242NGacAac11B.1.177.510.004566
ORF1ab/nsp31242D1242delGAC---11B.1.177.510.004566
ORF1ab/nsp31242D1242NGacAac11B.1.177.580.001332
ORF1ab/nsp31242D1242delGAC---11B.1.177.620.001192
ORF1ab/nsp31242D1242delGAC---11B.1.177.70.000165
ORF1ab/nsp31242D1242delGAC---11B.1.177.830.001481
ORF1ab/nsp31242D1242YGacTac11B.1.177.860.000183
ORF1ab/nsp31242D1242delGAC---11B.1.20.000009
ORF1ab/nsp31242D1242YGacTac11B.1.220.001318
ORF1ab/nsp31242D1242DgaCgaT11B.1.2400.000216
ORF1ab/nsp31242D1242GgAcgGc11B.1.2580.000067
ORF1ab/nsp31242D1242NGacAac11B.1.2580.000067
ORF1ab/nsp31242D1242YGacTac11B.1.258.110.000396
ORF1ab/nsp31242D1242YGacTac11B.1.258.170.000104
ORF1ab/nsp31242D1242DgaCgaT11B.1.2670.018519
ORF1ab/nsp31242D1242DgaCgaT11B.1.3400.004292
ORF1ab/nsp31242D1242EgaCgaA11B.1.3490.000715
ORF1ab/nsp31242D1242DgaCgaT11B.1.3510.00003
ORF1ab/nsp31242D1242DgaCgaT11B.1.351.20.000303
ORF1ab/nsp31242D1242NGacAac11B.1.360.000146
ORF1ab/nsp31242D1242YGacTac11B.1.36.100.004785
ORF1ab/nsp31242D1242DgaCgaT11B.1.36.170.000494
ORF1ab/nsp31242D1242EgaCgaA11B.1.36.310.001751
ORF1ab/nsp31242D1242DgaCgaT11B.1.362.20.004717
ORF1ab/nsp31242D1242YGacTac11B.1.3750.00082
ORF1ab/nsp31242D1242YGaCTaT11B.1.3980.002976
ORF1ab/nsp31242D1242DgaCgaT11B.1.4210.007463
ORF1ab/nsp31242D1242EgaCgaA11B.1.4220.000812
ORF1ab/nsp31242D1242EgaCgaA11B.1.438.10.000107
ORF1ab/nsp31242D1242DgaCgaT11B.1.466.20.000391
ORF1ab/nsp31242D1242YGacTac11B.1.5250.000113
ORF1ab/nsp31242D1242YGacTac11B.1.5580.004566
ORF1ab/nsp31242D1242DgaCgaT11B.1.5640.000426
ORF1ab/nsp31242D1242DgaCgaT11B.1.5720.025
ORF1ab/nsp31242D1242DgaCgaT11B.1.5760.000907
ORF1ab/nsp31242D1242YGaCTaT11B.1.5960.000087
ORF1ab/nsp31242D1242AgAcgCc11B.1.617.20.000004
ORF1ab/nsp31242D1242delGAC---11B.1.617.20.000004
ORF1ab/nsp31242D1242NGacAac11B.1.6180.004032
ORF1ab/nsp31242D1242YGacTac11B.1.6210.000089
ORF1ab/nsp31242D1242NGacAac11B.1.6320.006711
ORF1ab/nsp31242D1242YGacTac11B.1.6370.000073
ORF1ab/nsp31242D1242YGacTac11B.1.910.002075
ORF1ab/nsp31242D1242YGacTac11B.390.002331
ORF1ab/nsp31242D1242DgaCgaT11C.180.002591
ORF1ab/nsp31242D1242AgAcgCc11C.350.000774
ORF1ab/nsp31242D1242VgAcgTc11D.20.000075
ORF1ab/nsp31242D1242DgaCgaT11G.10.041667
ORF1ab/nsp31242D1242DgaCgaT11N.40.004255
ORF1ab/nsp31242D1242YGacTac11N.50.001767
ORF1ab/nsp31242D1242delGAC---11P.10.000016
ORF1ab/nsp31242D1242AgAcgCc11P.1.130.000898
ORF1ab/nsp31242D1242VgAcgTc11P.1.140.000048
ORF1ab/nsp31242D1242DgaCgaT11P.1.170.000162
ORF1ab/nsp31242D1242GgAcgGc11P.1.70.000319
ORF1ab/nsp31242D1242DgaCgaT11P.50.013699
ORF1ab/nsp31242D1242DgaCgaT11Q.20.000613
ORF1ab/nsp31242D1242NGacAac11Q.80.000165
ORF1ab/nsp31242D1242DgaCgaT11Q.80.000165