CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1237 & Codon = cTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31237P1237LP2055LnonsyncCtcTt7717680.9961096428-6430

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31237P1237LcCtcTt768771All0.000147
ORF1ab/nsp31237P1237LcCtcTt101101B.1.20.000889
ORF1ab/nsp31237P1237LcCtcTt100100P.1.150.023234
ORF1ab/nsp31237P1237LcCtcTt9999B.1.1.70.000089
ORF1ab/nsp31237P1237LcCtcTt8585AY.40.000132
ORF1ab/nsp31237P1237LcCtcTt4646B.1.1770.000606
ORF1ab/nsp31237P1237LcCtcTt2626B.1.438.10.002789
ORF1ab/nsp31237P1237LcCtcTt2323AY.30.000229
ORF1ab/nsp31237P1237LcCtcTt2121B.1.617.20.000079
ORF1ab/nsp31237P1237LcCtcTt1717B.1.617.10.002192
ORF1ab/nsp31237P1237LcCtcTt1616AY.440.000097
ORF1ab/nsp31237P1237LcCtcTt1616AY.740.00185
ORF1ab/nsp31237P1237LcCtcTt1415P.10.000221
ORF1ab/nsp31237P1237LcCtcTt1414B.1.10.000254
ORF1ab/nsp31237P1237LcCtcTt1313B.1.1.700.004434
ORF1ab/nsp31237P1237LcCtcTt1212AY.250.000072
ORF1ab/nsp31237P1237LcCtcTt1010B.1.360.001459
ORF1ab/nsp31237P1237LcCtcTt99AY.46.60.00065
ORF1ab/nsp31237P1237LcCtcTt99B.1.4290.000212
ORF1ab/nsp31237P1237LcCtcTt88AY.120.10.002568
ORF1ab/nsp31237P1237LcCtcTt88B.10.000073
ORF1ab/nsp31237P1237LcCtcTt77AY.430.000031
ORF1ab/nsp31237P1237LcCtcTt66B.1.1.2070.007092
ORF1ab/nsp31237P1237LcCtcTt66B.1.1.3060.00263
ORF1ab/nsp31237P1237LcCtcTt55AY.1020.000133
ORF1ab/nsp31237P1237LcCtcTt55AY.130.000805
ORF1ab/nsp31237P1237LcCtcTt55C.370.00058
ORF1ab/nsp31237P1237LcCtcTt44AY.1060.00134
ORF1ab/nsp31237P1237LcCtcTt44AY.290.000063
ORF1ab/nsp31237P1237LcCtcTt24AY.390.000049
ORF1ab/nsp31237P1237LcCtcTt44AY.420.000161
ORF1ab/nsp31237P1237LcCtcTt44B.1.1.2980.003448
ORF1ab/nsp31237P1237LcCtcTt33AY.1110.000549
ORF1ab/nsp31237P1237LcCtcTt33B.1.1.3180.000905
ORF1ab/nsp31237P1237LcCtcTt33B.1.3960.002117
ORF1ab/nsp31237P1237LcCtcTt33D.20.000225
ORF1ab/nsp31237P1237LcCtcTt22AY.1090.001479
ORF1ab/nsp31237P1237LcCtcTt22AY.60.000082
ORF1ab/nsp31237P1237LcCtcTt22AY.610.00021
ORF1ab/nsp31237P1237LcCtcTt22B.1.1.280.000622
ORF1ab/nsp31237P1237LcCtcTt22B.1.1600.000062
ORF1ab/nsp31237P1237LcCtcTt22B.1.2210.000142
ORF1ab/nsp31237P1237LcCtcTt22B.1.5960.000174
ORF1ab/nsp31237P1237LcCtcTt22B.1.6210.000177
ORF1ab/nsp31237P1237LcCtcTt22P.1.10.000635
ORF1ab/nsp31237P1237LcCtcTt11AY.10.000396
ORF1ab/nsp31237P1237LcCtcTt11AY.1170.000085
ORF1ab/nsp31237P1237LcCtcTt11AY.1190.000035
ORF1ab/nsp31237P1237LcCtcTt11AY.160.00038
ORF1ab/nsp31237P1237LcCtcTt11AY.200.000039
ORF1ab/nsp31237P1237LcCtcTt11AY.230.00007
ORF1ab/nsp31237P1237LcCtcTt11AY.270.000065
ORF1ab/nsp31237P1237LcCtcTt11AY.39.10.00004
ORF1ab/nsp31237P1237LcCtcTt11AY.470.000031
ORF1ab/nsp31237P1237LcCtcTt11AY.50.000021
ORF1ab/nsp31237P1237LcCtcTt11AY.530.000288
ORF1ab/nsp31237P1237LcCtcTt11AY.70.000196
ORF1ab/nsp31237P1237LcCtcTt11AY.750.000056
ORF1ab/nsp31237P1237LcCtcTt11AY.850.000427
ORF1ab/nsp31237P1237LcCtcTt11AY.99.10.001553
ORF1ab/nsp31237P1237LcCtcTt11B.1.1.1210.002427
ORF1ab/nsp31237P1237LcCtcTt11B.1.1.1250.010204
ORF1ab/nsp31237P1237LcCtcTt11B.1.1.1760.000439
ORF1ab/nsp31237P1237LcCtcTt11B.1.1.4340.000349
ORF1ab/nsp31237P1237LcCtcTt11B.1.1.5190.00004
ORF1ab/nsp31237P1237LcCtcTt11B.1.1.520.012195
ORF1ab/nsp31237P1237LcCtcTt11B.1.1030.019231
ORF1ab/nsp31237P1237LcCtcTt11B.1.177.210.000076
ORF1ab/nsp31237P1237LcCtcTt11B.1.177.560.000668
ORF1ab/nsp31237P1237LcCtcTt11B.1.177.600.000218
ORF1ab/nsp31237P1237LcCtcTt11B.1.2340.000132
ORF1ab/nsp31237P1237LcCtcTt11B.1.2430.00007
ORF1ab/nsp31237P1237LcCtcTt11B.1.3510.00003
ORF1ab/nsp31237P1237LcCtcTt11B.1.36.160.001425
ORF1ab/nsp31237P1237LcCtcTt11B.1.36.360.000602
ORF1ab/nsp31237P1237LcCtcTt11B.1.4220.000812
ORF1ab/nsp31237P1237LcCtcTt11B.1.4700.001404
ORF1ab/nsp31237P1237LcCtcTt11B.1.5950.000261
ORF1ab/nsp31237P1237LcCtcTt11B.1.6090.000479
ORF1ab/nsp31237P1237LcCtcTt11B.1.6200.000946
ORF1ab/nsp31237P1237LcCtcTt11B.1.6280.000352
ORF1ab/nsp31237P1237LcCtcTt11C.36.30.000567
ORF1ab/nsp31237P1237LcCtcTt11C.37.10.002618
ORF1ab/nsp31237P1237LcCtcTt11P.1.70.000319