CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1237 & Codon = cAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31237P1237HP2055HnonsyncCtcAt20920916428-6430

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31237P1237HcCtcAt209209All0.00004
ORF1ab/nsp31237P1237HcCtcAt7979B.1.2430.005497
ORF1ab/nsp31237P1237HcCtcAt4343B.1.1.70.000038
ORF1ab/nsp31237P1237HcCtcAt2323B.1.1.5190.000913
ORF1ab/nsp31237P1237HcCtcAt1414AY.590.007415
ORF1ab/nsp31237P1237HcCtcAt1010B.1.617.20.000038
ORF1ab/nsp31237P1237HcCtcAt88AY.440.000049
ORF1ab/nsp31237P1237HcCtcAt77AY.200.000272
ORF1ab/nsp31237P1237HcCtcAt55B.1.20.000044
ORF1ab/nsp31237P1237HcCtcAt44AY.39.10.000158
ORF1ab/nsp31237P1237HcCtcAt33B.10.000027
ORF1ab/nsp31237P1237HcCtcAt22AY.290.000032
ORF1ab/nsp31237P1237HcCtcAt22AY.40.000003
ORF1ab/nsp31237P1237HcCtcAt11AY.270.000065
ORF1ab/nsp31237P1237HcCtcAt11AY.3.10.000085
ORF1ab/nsp31237P1237HcCtcAt11AY.340.000097
ORF1ab/nsp31237P1237HcCtcAt11AY.390.000025
ORF1ab/nsp31237P1237HcCtcAt11AY.430.000004
ORF1ab/nsp31237P1237HcCtcAt11AY.50.000021
ORF1ab/nsp31237P1237HcCtcAt11B.1.10.000018
ORF1ab/nsp31237P1237HcCtcAt11B.1.1.390.00051
ORF1ab/nsp31237P1237HcCtcAt11D.20.000075