CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1230 & Codon = tcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31230S1230SS2048SsyntcTtcC130311830.9079056407-6409

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31230S1230StcTtcC11831303All0.000226
ORF1ab/nsp31230S1230StcTtcC610623B.1.1.70.000546
ORF1ab/nsp31230S1230StcTtcC225226AY.30.002238
ORF1ab/nsp31230S1230StcTtcC6063AY.250.000361
ORF1ab/nsp31230S1230StcTtcC3849B.1.617.20.000143
ORF1ab/nsp31230S1230StcTtcC240B.1.5960.000174
ORF1ab/nsp31230S1230StcTtcC3739AY.40.000058
ORF1ab/nsp31230S1230StcTtcC3637AY.1030.000224
ORF1ab/nsp31230S1230StcTtcC2728AY.440.000164
ORF1ab/nsp31230S1230StcTtcC2021B.1.20.000176
ORF1ab/nsp31230S1230StcTtcC1919B.1.2400.004096
ORF1ab/nsp31230S1230StcTtcC1515B.1.36.240.092593
ORF1ab/nsp31230S1230StcTtcC1111AY.420.000443
ORF1ab/nsp31230S1230StcTtcC211AY.430.000009
ORF1ab/nsp31230S1230StcTtcC88AY.1020.000212
ORF1ab/nsp31230S1230StcTtcC46B.1.10.000073
ORF1ab/nsp31230S1230StcTtcC45AY.470.000124
ORF1ab/nsp31230S1230StcTtcC15B.1.1770.000013
ORF1ab/nsp31230S1230StcTtcC44AY.1180.000251
ORF1ab/nsp31230S1230StcTtcC44AY.150.008889
ORF1ab/nsp31230S1230StcTtcC34B.1.2210.000213
ORF1ab/nsp31230S1230StcTtcC14B.1.360.000146
ORF1ab/nsp31230S1230StcTtcC44P.10.000063
ORF1ab/nsp31230S1230StcTtcC13AY.290.000016
ORF1ab/nsp31230S1230StcTtcC33AY.4.20.000065
ORF1ab/nsp31230S1230StcTtcC23B.1.4290.000047
ORF1ab/nsp31230S1230StcTtcC23B.1.5250.000226
ORF1ab/nsp31230S1230StcTtcC22AY.1090.001479
ORF1ab/nsp31230S1230StcTtcC22AY.330.000134
ORF1ab/nsp31230S1230StcTtcC22AY.340.000194
ORF1ab/nsp31230S1230StcTtcC22AY.450.000243
ORF1ab/nsp31230S1230StcTtcC12AY.540.000095
ORF1ab/nsp31230S1230StcTtcC22AY.60.000082
ORF1ab/nsp31230S1230StcTtcC12AY.980.000079
ORF1ab/nsp31230S1230StcTtcC12B.10.000009
ORF1ab/nsp31230S1230StcTtcC22B.1.1.2430.008163
ORF1ab/nsp31230S1230StcTtcC22B.1.177.350.001382
ORF1ab/nsp31230S1230StcTtcC22B.1.5260.000047
ORF1ab/nsp31230S1230StcTtcC11AY.1170.000085
ORF1ab/nsp31230S1230StcTtcC11AY.390.000025
ORF1ab/nsp31230S1230StcTtcC11AY.39.10.00004
ORF1ab/nsp31230S1230StcTtcC11AY.4.2.10.000149
ORF1ab/nsp31230S1230StcTtcC11AY.460.000104
ORF1ab/nsp31230S1230StcTtcC11AY.46.40.000165
ORF1ab/nsp31230S1230StcTtcC11AY.50.000021
ORF1ab/nsp31230S1230StcTtcC11AY.920.000287
ORF1ab/nsp31230S1230StcTtcC11AY.930.000273
ORF1ab/nsp31230S1230StcTtcC11AY.98.10.000048
ORF1ab/nsp31230S1230StcTtcC11B.1.177.860.000183
ORF1ab/nsp31230S1230StcTtcC11B.1.2430.00007
ORF1ab/nsp31230S1230StcTtcC11B.1.3560.001727
ORF1ab/nsp31230S1230StcTtcC11B.1.416.10.001563
ORF1ab/nsp31230S1230StcTtcC11B.1.5500.013699
ORF1ab/nsp31230S1230StcTtcC11B.1.5750.000303
ORF1ab/nsp31230S1230StcTtcC11B.1.617.10.000129
ORF1ab/nsp31230S1230StcTtcC11B.6.80.008264
ORF1ab/nsp31230S1230StcTtcC11C.300.001727
ORF1ab/nsp31230S1230StcTtcC11D.20.000075
ORF1ab/nsp31230S1230StcTtcC11Q.80.000165