CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1230 & Codon = tAt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31230S1230YS2048YnonsyntCttAt36036016407-6409

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31230S1230YtCttAt360360All0.000069
ORF1ab/nsp31230S1230YtCttAt211211B.1.1.70.000189
ORF1ab/nsp31230S1230YtCttAt4040B.1.5820.019627
ORF1ab/nsp31230S1230YtCttAt2525AY.430.000111
ORF1ab/nsp31230S1230YtCttAt1313AY.30.000129
ORF1ab/nsp31230S1230YtCttAt1010AY.9.10.000837
ORF1ab/nsp31230S1230YtCttAt88AY.440.000049
ORF1ab/nsp31230S1230YtCttAt77AY.1000.000322
ORF1ab/nsp31230S1230YtCttAt55AY.1200.000186
ORF1ab/nsp31230S1230YtCttAt44AY.250.000024
ORF1ab/nsp31230S1230YtCttAt44B.1.4970.001259
ORF1ab/nsp31230S1230YtCttAt44B.1.5970.018519
ORF1ab/nsp31230S1230YtCttAt33B.1.617.20.000011
ORF1ab/nsp31230S1230YtCttAt33P.10.000047
ORF1ab/nsp31230S1230YtCttAt22B.1.466.20.000782
ORF1ab/nsp31230S1230YtCttAt22B.1.5990.007299
ORF1ab/nsp31230S1230YtCttAt110.055556
ORF1ab/nsp31230S1230YtCttAt11AY.1030.000006
ORF1ab/nsp31230S1230YtCttAt11AY.1170.000085
ORF1ab/nsp31230S1230YtCttAt11AY.270.000065
ORF1ab/nsp31230S1230YtCttAt11AY.360.000148
ORF1ab/nsp31230S1230YtCttAt11AY.40.000002
ORF1ab/nsp31230S1230YtCttAt11AY.450.000122
ORF1ab/nsp31230S1230YtCttAt11AY.460.000104
ORF1ab/nsp31230S1230YtCttAt11AY.520.000814
ORF1ab/nsp31230S1230YtCttAt11B.10.000009
ORF1ab/nsp31230S1230YtCttAt11B.1.1.3780.007299
ORF1ab/nsp31230S1230YtCttAt11B.1.1.5190.00004
ORF1ab/nsp31230S1230YtCttAt11B.1.20.000009
ORF1ab/nsp31230S1230YtCttAt11B.1.258.170.000104
ORF1ab/nsp31230S1230YtCttAt11B.1.3010.005917
ORF1ab/nsp31230S1230YtCttAt11B.1.3510.00003
ORF1ab/nsp31230S1230YtCttAt11B.1.36.160.001425
ORF1ab/nsp31230S1230YtCttAt11B.1.5260.000024
ORF1ab/nsp31230S1230YtCttAt11B.1.6120.002653