CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1230 & Codon = Gct

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31230S1230AS2048AnonsynTctGct31331316407-6409

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31230S1230ATctGct313313All0.00006
ORF1ab/nsp31230S1230ATctGct169169B.1.1.3480.134554
ORF1ab/nsp31230S1230ATctGct3939AY.470.001213
ORF1ab/nsp31230S1230ATctGct3232B.1.20.000282
ORF1ab/nsp31230S1230ATctGct2626B.1.1.70.000023
ORF1ab/nsp31230S1230ATctGct1212AY.30.000119
ORF1ab/nsp31230S1230ATctGct1111B.10.000101
ORF1ab/nsp31230S1230ATctGct33AY.230.000209
ORF1ab/nsp31230S1230ATctGct33B.1.10.000054
ORF1ab/nsp31230S1230ATctGct33B.1.5820.001472
ORF1ab/nsp31230S1230ATctGct22AY.40.000003
ORF1ab/nsp31230S1230ATctGct22AY.430.000009
ORF1ab/nsp31230S1230ATctGct22B.1.617.20.000008
ORF1ab/nsp31230S1230ATctGct110.055556
ORF1ab/nsp31230S1230ATctGct11AY.250.000006
ORF1ab/nsp31230S1230ATctGct11AY.260.000028
ORF1ab/nsp31230S1230ATctGct11AY.440.000006
ORF1ab/nsp31230S1230ATctGct11B.1.1.4170.002703
ORF1ab/nsp31230S1230ATctGct11B.1.1.5190.00004
ORF1ab/nsp31230S1230ATctGct11B.1.1.700.000341
ORF1ab/nsp31230S1230ATctGct11B.1.177.70.000165
ORF1ab/nsp31230S1230ATctGct11P.1.140.000048