CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1228 & Codon = TTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31228P1228LP2046LnonsynCCaTTa241298931420.001302126401-6403

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31228P1228LCCaTTa31422412989All0.000601
ORF1ab/nsp31228P1228LCCaTTa468633680AY.40.000728
ORF1ab/nsp31228P1228LCCaTTa351223273B.1.617.20.001322
ORF1ab/nsp31228P1228LCCaTTa114220436AY.430.000505
ORF1ab/nsp31228P1228LCCaTTa119164693AY.250.000716
ORF1ab/nsp31228P1228LCCaTTa526161210AY.440.003202
ORF1ab/nsp31228P1228LCCaTTa266159439AY.1030.001652
ORF1ab/nsp31228P1228LCCaTTa8399544AY.30.000826
ORF1ab/nsp31228P1228LCCaTTa2163368AY.290.000331
ORF1ab/nsp31228P1228LCCaTTa15347848AY.50.003159
ORF1ab/nsp31228P1228LCCaTTa22644944AY.4.20.004902
ORF1ab/nsp31228P1228LCCaTTa6939761AY.390.001705
ORF1ab/nsp31228P1228LCCaTTa4437592AY.1020.001167
ORF1ab/nsp31228P1228LCCaTTa24328033AY.1190.00858
ORF1ab/nsp31228P1228LCCaTTa526530AY.1200.000186
ORF1ab/nsp31228P1228LCCaTTa2925467AY.200.001127
ORF1ab/nsp31228P1228LCCaTTa1024609AY.39.10.000396
ORF1ab/nsp31228P1228LCCaTTa524566AY.420.000201
ORF1ab/nsp31228P1228LCCaTTa524024AY.60.000206
ORF1ab/nsp31228P1228LCCaTTa1121588AY.1000.000506
ORF1ab/nsp31228P1228LCCaTTa2420368AY.98.10.001162
ORF1ab/nsp31228P1228LCCaTTa415757AY.1180.000251
ORF1ab/nsp31228P1228LCCaTTa1214748AY.330.000801
ORF1ab/nsp31228P1228LCCaTTa313957AY.230.000209
ORF1ab/nsp31228P1228LCCaTTa113753AY.46.60.000072
ORF1ab/nsp31228P1228LCCaTTa112250AY.980.000079
ORF1ab/nsp31228P1228LCCaTTa911579AY.1170.000761
ORF1ab/nsp31228P1228LCCaTTa510804AY.99.20.000461
ORF1ab/nsp31228P1228LCCaTTa59357AY.460.00052
ORF1ab/nsp31228P1228LCCaTTa149260AY.4.50.001505
ORF1ab/nsp31228P1228LCCaTTa727802AY.450.008761
ORF1ab/nsp31228P1228LCCaTTa17304AY.1210.000135
ORF1ab/nsp31228P1228LCCaTTa56868AY.1130.000712
ORF1ab/nsp31228P1228LCCaTTa76676AY.360.001037
ORF1ab/nsp31228P1228LCCaTTa36493AY.4.2.10.000447
ORF1ab/nsp31228P1228LCCaTTa36033AY.46.40.000494
ORF1ab/nsp31228P1228LCCaTTa145378AY.1110.002564
ORF1ab/nsp31228P1228LCCaTTa25066AY.70.000392
ORF1ab/nsp31228P1228LCCaTTa14948AY.46.50.000198
ORF1ab/nsp31228P1228LCCaTTa14264AY.1140.000231
ORF1ab/nsp31228P1228LCCaTTa53589AY.930.001365
ORF1ab/nsp31228P1228LCCaTTa23470AY.5.40.000553
ORF1ab/nsp31228P1228LCCaTTa283370AY.1160.00803
ORF1ab/nsp31228P1228LCCaTTa23296AY.920.000575
ORF1ab/nsp31228P1228LCCaTTa13180AY.116.10.000311
ORF1ab/nsp31228P1228LCCaTTa113141AY.120.003477
ORF1ab/nsp31228P1228LCCaTTa43089AY.120.10.001284
ORF1ab/nsp31228P1228LCCaTTa12946AY.1060.000335
ORF1ab/nsp31228P1228LCCaTTa12884AY.5.30.000337
ORF1ab/nsp31228P1228LCCaTTa42488AY.10.001583
ORF1ab/nsp31228P1228LCCaTTa12233AY.840.000437
ORF1ab/nsp31228P1228LCCaTTa962002AY.120.2.10.047833
ORF1ab/nsp31228P1228LCCaTTa211821AY.320.011182
ORF1ab/nsp31228P1228LCCaTTa21435AY.900.001369
ORF1ab/nsp31228P1228LCCaTTa11173AY.870.000833
ORF1ab/nsp31228P1228LCCaTTa11142AY.860.00083
ORF1ab/nsp31228P1228LCCaTTa41013AY.470.000124
ORF1ab/nsp31228P1228LCCaTTa1954AY.46.10.001027
ORF1ab/nsp31228P1228LCCaTTa2948B.10.000018
ORF1ab/nsp31228P1228LCCaTTa2937AY.990.002099
ORF1ab/nsp31228P1228LCCaTTa2869AY.750.000112
ORF1ab/nsp31228P1228LCCaTTa1837AY.770.001127
ORF1ab/nsp31228P1228LCCaTTa1809AY.790.001211
ORF1ab/nsp31228P1228LCCaTTa1701AY.820.001357
ORF1ab/nsp31228P1228LCCaTTa1649AY.39.20.001541
ORF1ab/nsp31228P1228LCCaTTa2557B0.000256
ORF1ab/nsp31228P1228LCCaTTa1397AY.5.20.002463
ORF1ab/nsp31228P1228LCCaTTa2316P.10.000032
ORF1ab/nsp31228P1228LCCaTTa1233AY.530.000288
ORF1ab/nsp31228P1228LCCaTTa1203AY.760.004831
ORF1ab/nsp31228P1228LCCaTTa190AY.480.000465
ORF1ab/nsp31228P1228LCCaTTa154AY.110.001339
ORF1ab/nsp31228P1228LCCaTTa22B.1.6250.004706