CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1214

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31214D1214DD2032DsyngaCgaT3358335816359-6361
ORF1ab/nsp31214D1214ND2032NnonsynGacAac6386370.9984336359-6361
ORF1ab/nsp31214D1214ND2032NnonsynGaCAaT63810.00156746359-6361
ORF1ab/nsp31214D1214YD2032YnonsynGacTac22722716359-6361
ORF1ab/nsp31214D1214delD2032deldelGAC---22422416359-6361
ORF1ab/nsp31214D1214GD2032GnonsyngAcgGc2192160.9863016359-6361
ORF1ab/nsp31214D1214GD2032GnonsyngACgGA21920.009132426359-6361
ORF1ab/nsp31214D1214GD2032GnonsyngACgGT21910.004566216359-6361
ORF1ab/nsp31214D1214ED2032EnonsyngaCgaA32310.968756359-6361
ORF1ab/nsp31214D1214ED2032EnonsyngaCgaG3210.031256359-6361
ORF1ab/nsp31214D1214AD2032AnonsyngAcgCc272716359-6361
ORF1ab/nsp31214D1214VD2032VnonsyngAcgTc950.5555566359-6361
ORF1ab/nsp31214D1214VD2032VnonsyngACgTA930.3333336359-6361
ORF1ab/nsp31214D1214VD2032VnonsyngACgTT910.1111116359-6361
ORF1ab/nsp31214D1214ID2032InonsynGAcATc730.4285716359-6361
ORF1ab/nsp31214D1214ID2032InonsynGACATA730.4285716359-6361
ORF1ab/nsp31214D1214ID2032InonsynGACATT710.1428576359-6361
ORF1ab/nsp31214D1214HD2032HnonsynGacCac5516359-6361
ORF1ab/nsp31214D1214SD2032SnonsynGAcAGc520.46359-6361
ORF1ab/nsp31214D1214SD2032SnonsynGACAGT520.46359-6361
ORF1ab/nsp31214D1214SD2032SnonsynGACTCT510.26359-6361
ORF1ab/nsp31214D1214KD2032KnonsynGaCAaA4416359-6361
ORF1ab/nsp31214D1214del1D2032del1delgaCga-430.756359-6361
ORF1ab/nsp31214D1214del1D2032del1delGac-ac410.256359-6361
ORF1ab/nsp31214D1214RD2032RnonsynGACAGA320.6666676359-6361
ORF1ab/nsp31214D1214RD2032RnonsynGACAGG310.3333336359-6361
ORF1ab/nsp31214D1214XD2032XnonsynGaCTaA1116359-6361
ORF1ab/nsp31214D1214TD2032TnonsynGAcACc1116359-6361

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31214D1214DgaCgaT33583358All0.000642
ORF1ab/nsp31214D1214NGacAac637638All0.000122
ORF1ab/nsp31214D1214NGaCAaT1638All0
ORF1ab/nsp31214D1214DgaCgaT583583B.1.1.70.000522
ORF1ab/nsp31214D1214DgaCgaT501501AY.40.00078
ORF1ab/nsp31214D1214DgaCgaT376376B.1.4290.008847
ORF1ab/nsp31214D1214DgaCgaT287287B.1.466.20.112285
ORF1ab/nsp31214D1214YGacTac227227All0.000043
ORF1ab/nsp31214D1214delGAC---224224All0.000043
ORF1ab/nsp31214D1214GgAcgGc216219All0.000041
ORF1ab/nsp31214D1214GgACgGA2219All0
ORF1ab/nsp31214D1214GgACgGT1219All0
ORF1ab/nsp31214D1214NGacAac208208B.1.1.70.000186
ORF1ab/nsp31214D1214DgaCgaT159159B.1.617.20.000599
ORF1ab/nsp31214D1214DgaCgaT142142AY.30.001412
ORF1ab/nsp31214D1214GgAcgGc9999B.1.1.3800.970588
ORF1ab/nsp31214D1214DgaCgaT9898B.1.2430.006819
ORF1ab/nsp31214D1214DgaCgaT7373AY.250.000439
ORF1ab/nsp31214D1214DgaCgaT6161P.1.150.014173
ORF1ab/nsp31214D1214DgaCgaT5858AY.440.000353
ORF1ab/nsp31214D1214NGacAac5555B.1.2180.283505
ORF1ab/nsp31214D1214DgaCgaT5151AY.430.000226
ORF1ab/nsp31214D1214NGacAac4646AY.40.000072
ORF1ab/nsp31214D1214DgaCgaT4545AY.1030.000279
ORF1ab/nsp31214D1214DgaCgaT4343B.1.10.00078
ORF1ab/nsp31214D1214DgaCgaT4141AY.330.002738
ORF1ab/nsp31214D1214NGacAac4040B.1.617.20.000151
ORF1ab/nsp31214D1214DgaCgaT3939B.1.20.000343
ORF1ab/nsp31214D1214delGAC---3838AY.40.000059
ORF1ab/nsp31214D1214YGacTac3737B.1.5260.00087
ORF1ab/nsp31214D1214DgaCgaT3636AY.1070.016775
ORF1ab/nsp31214D1214NGacAac3334AY.250.000198
ORF1ab/nsp31214D1214NGaCAaT134AY.250.000006
ORF1ab/nsp31214D1214EgaCgaA3132All0.000006
ORF1ab/nsp31214D1214EgaCgaG132All0
ORF1ab/nsp31214D1214DgaCgaT3232AY.1000.001472
ORF1ab/nsp31214D1214DgaCgaT3232B.1.1.3180.009656
ORF1ab/nsp31214D1214YGacTac3232B.1.1.70.000029
ORF1ab/nsp31214D1214DgaCgaT2929B.10.000266
ORF1ab/nsp31214D1214NGacAac2929B.10.000266
ORF1ab/nsp31214D1214AgAcgCc2727All0.000005
ORF1ab/nsp31214D1214DgaCgaT2727AY.9.20.000992
ORF1ab/nsp31214D1214DgaCgaT2727B.1.2580.001797
ORF1ab/nsp31214D1214GgAcgGc2727P.10.000425
ORF1ab/nsp31214D1214DgaCgaT2424B.1.177.661
ORF1ab/nsp31214D1214delGAC---2424B.1.617.20.00009
ORF1ab/nsp31214D1214DgaCgaT2424P.10.000378
ORF1ab/nsp31214D1214NGacAac2222B.1.1770.00029
ORF1ab/nsp31214D1214YGacTac2121AY.40.000033
ORF1ab/nsp31214D1214delGAC---2121AY.46.50.004167
ORF1ab/nsp31214D1214NGacAac1919AY.260.000538
ORF1ab/nsp31214D1214YGacTac1919B.1.438.10.002038
ORF1ab/nsp31214D1214DgaCgaT1818AY.1020.000477
ORF1ab/nsp31214D1214DgaCgaT1818B.1.1600.000561
ORF1ab/nsp31214D1214DgaCgaT1717AY.3.10.001449
ORF1ab/nsp31214D1214DgaCgaT1717AY.98.10.000823
ORF1ab/nsp31214D1214GgAcgGc1717B.1.1.70.000015
ORF1ab/nsp31214D1214DgaCgaT1616AY.610.001676
ORF1ab/nsp31214D1214NGacAac1515AY.1200.000558
ORF1ab/nsp31214D1214NGacAac1515AY.50.00031
ORF1ab/nsp31214D1214DgaCgaT1414AY.260.000396
ORF1ab/nsp31214D1214delGAC---1414AY.440.000085
ORF1ab/nsp31214D1214delGAC---1313AY.1000.000598
ORF1ab/nsp31214D1214DgaCgaT1313AY.160.004935
ORF1ab/nsp31214D1214GgAcgGc1013AY.250.00006
ORF1ab/nsp31214D1214GgACgGA213AY.250.000012
ORF1ab/nsp31214D1214GgACgGT113AY.250.000006
ORF1ab/nsp31214D1214NGacAac1313AY.390.000321
ORF1ab/nsp31214D1214NGacAac1313AY.440.000079
ORF1ab/nsp31214D1214delGAC---1313B.1.1.70.000012
ORF1ab/nsp31214D1214DgaCgaT1313B.1.5260.000306
ORF1ab/nsp31214D1214DgaCgaT1212Q.30.00174
ORF1ab/nsp31214D1214NGacAac1111AY.1020.000292
ORF1ab/nsp31214D1214NGacAac1111AY.30.000109
ORF1ab/nsp31214D1214DgaCgaT1111AY.390.000272
ORF1ab/nsp31214D1214DgaCgaT1111AY.410.003233
ORF1ab/nsp31214D1214NGacAac1111AY.610.001153
ORF1ab/nsp31214D1214YGacTac1111B.10.000101
ORF1ab/nsp31214D1214DgaCgaT1111B.1.1.4220.5
ORF1ab/nsp31214D1214delGAC---1111B.1.177.30.083969
ORF1ab/nsp31214D1214DgaCgaT1111B.1.177.810.002083
ORF1ab/nsp31214D1214YGacTac1010AY.250.00006
ORF1ab/nsp31214D1214EgaCgaA1010AY.250.00006
ORF1ab/nsp31214D1214DgaCgaT1010AY.780.015408
ORF1ab/nsp31214D1214GgAcgGc1010B.1.617.20.000038
ORF1ab/nsp31214D1214VgAcgTc59All0.000001
ORF1ab/nsp31214D1214VgACgTA39All0.000001
ORF1ab/nsp31214D1214VgACgTT19All0
ORF1ab/nsp31214D1214NGacAac99AY.430.00004
ORF1ab/nsp31214D1214YGacTac99AY.430.00004
ORF1ab/nsp31214D1214NGacAac99B.1.10.000163
ORF1ab/nsp31214D1214DgaCgaT99B.1.1.10.00294
ORF1ab/nsp31214D1214DgaCgaT99B.1.1.2650.028391
ORF1ab/nsp31214D1214YGacTac99B.1.1.5190.000357
ORF1ab/nsp31214D1214DgaCgaT88AY.1200.000297
ORF1ab/nsp31214D1214YGacTac88AY.1200.000297
ORF1ab/nsp31214D1214DgaCgaT88AY.46.60.000578
ORF1ab/nsp31214D1214DgaCgaT88B.1.177.240.010363
ORF1ab/nsp31214D1214NGacAac88B.1.177.620.009535
ORF1ab/nsp31214D1214DgaCgaT88B.1.5880.007279
ORF1ab/nsp31214D1214DgaCgaT88B.1.6270.016162
ORF1ab/nsp31214D1214IGAcATc37All0.000001
ORF1ab/nsp31214D1214IGACATA37All0.000001
ORF1ab/nsp31214D1214IGACATT17All0
ORF1ab/nsp31214D1214NGacAac77AY.1160.002007
ORF1ab/nsp31214D1214IGACATA37AY.250.000018
ORF1ab/nsp31214D1214VgACgTA37AY.250.000018
ORF1ab/nsp31214D1214IGAcATc37AY.250.000018
ORF1ab/nsp31214D1214VgAcgTc37AY.250.000018
ORF1ab/nsp31214D1214VgACgTT17AY.250.000006
ORF1ab/nsp31214D1214IGACATT17AY.250.000006
ORF1ab/nsp31214D1214AgAcgCc77AY.440.000043
ORF1ab/nsp31214D1214DgaCgaT77AY.50.000145
ORF1ab/nsp31214D1214DgaCgaT77AY.540.000667
ORF1ab/nsp31214D1214NGacAac77AY.9.10.000586
ORF1ab/nsp31214D1214DgaCgaT77B.1.177.110.011885
ORF1ab/nsp31214D1214DgaCgaT77B.1.3510.000208
ORF1ab/nsp31214D1214YGacTac77D.20.000525
ORF1ab/nsp31214D1214DgaCgaT77Q.80.001154
ORF1ab/nsp31214D1214DgaCgaT66AY.200.000233
ORF1ab/nsp31214D1214YGacTac66AY.60.000247
ORF1ab/nsp31214D1214GgAcgGc66B.10.000055
ORF1ab/nsp31214D1214DgaCgaT66B.1.1.4340.002091
ORF1ab/nsp31214D1214DgaCgaT66B.1.1770.000079
ORF1ab/nsp31214D1214DgaCgaT66B.1.177.400.030928
ORF1ab/nsp31214D1214delGAC---66B.1.177.830.008889
ORF1ab/nsp31214D1214DgaCgaT66B.1.36.180.002521
ORF1ab/nsp31214D1214HGacCac55All0.000001
ORF1ab/nsp31214D1214SGACAGT25All0
ORF1ab/nsp31214D1214SGAcAGc25All0
ORF1ab/nsp31214D1214SGACTCT15All0
ORF1ab/nsp31214D1214DgaCgaT55AY.340.000485
ORF1ab/nsp31214D1214DgaCgaT55AY.360.000741
ORF1ab/nsp31214D1214GgAcgGc55AY.40.000008
ORF1ab/nsp31214D1214DgaCgaT55AY.420.000201
ORF1ab/nsp31214D1214DgaCgaT55AY.60.000206
ORF1ab/nsp31214D1214delGAC---55B.10.000046
ORF1ab/nsp31214D1214DgaCgaT55B.1.3690.001426
ORF1ab/nsp31214D1214DgaCgaT55B.1.4690.018051
ORF1ab/nsp31214D1214DgaCgaT55B.1.5960.000436
ORF1ab/nsp31214D1214KGaCAaA44All0.000001
ORF1ab/nsp31214D1214del1gaCga-34All0.000001
ORF1ab/nsp31214D1214del1Gac-ac14All0
ORF1ab/nsp31214D1214DgaCgaT44AY.1180.000251
ORF1ab/nsp31214D1214DgaCgaT44AY.130.000644
ORF1ab/nsp31214D1214KGaCAaA44AY.250.000024
ORF1ab/nsp31214D1214NGacAac44AY.340.000388
ORF1ab/nsp31214D1214delGAC---44AY.390.000099
ORF1ab/nsp31214D1214AgAcgCc44B.1.1.70.000004
ORF1ab/nsp31214D1214DgaCgaT44B.1.110.30.002874
ORF1ab/nsp31214D1214delGAC---44B.1.1770.000053
ORF1ab/nsp31214D1214DgaCgaT44B.1.177.120.000607
ORF1ab/nsp31214D1214delGAC---44B.1.2340.000528
ORF1ab/nsp31214D1214NGacAac44B.1.4040.005208
ORF1ab/nsp31214D1214DgaCgaT44B.1.4270.000202
ORF1ab/nsp31214D1214YGacTac44B.1.617.20.000015
ORF1ab/nsp31214D1214DgaCgaT44B.1.6210.000354
ORF1ab/nsp31214D1214DgaCgaT44C.370.000464
ORF1ab/nsp31214D1214delGAC---44P.10.000063
ORF1ab/nsp31214D1214delGAC---44P.1.140.000191
ORF1ab/nsp31214D1214RGACAGA23All0
ORF1ab/nsp31214D1214RGACAGG13All0
ORF1ab/nsp31214D1214YGacTac33AY.1020.00008
ORF1ab/nsp31214D1214GgAcgGc33AY.1020.00008
ORF1ab/nsp31214D1214YGacTac33AY.1030.000019
ORF1ab/nsp31214D1214DgaCgaT33AY.1170.000254
ORF1ab/nsp31214D1214DgaCgaT33AY.140.000264
ORF1ab/nsp31214D1214YGacTac33AY.200.000117
ORF1ab/nsp31214D1214DgaCgaT33AY.240.001293
ORF1ab/nsp31214D1214delGAC---33AY.250.000018
ORF1ab/nsp31214D1214SGAcAGc23AY.250.000012
ORF1ab/nsp31214D1214SGACAGT13AY.250.000006
ORF1ab/nsp31214D1214DgaCgaT33AY.290.000047
ORF1ab/nsp31214D1214YGacTac33AY.30.00003
ORF1ab/nsp31214D1214YGacTac33AY.340.000291
ORF1ab/nsp31214D1214EgaCgaA33AY.40.000005
ORF1ab/nsp31214D1214AgAcgCc33AY.40.000005
ORF1ab/nsp31214D1214DgaCgaT33AY.4.20.000065
ORF1ab/nsp31214D1214EgaCgaA33AY.450.000365
ORF1ab/nsp31214D1214DgaCgaT33AY.460.000312
ORF1ab/nsp31214D1214DgaCgaT33AY.640.001786
ORF1ab/nsp31214D1214NGacAac33AY.770.003382
ORF1ab/nsp31214D1214DgaCgaT33B.1.1.2140.000166
ORF1ab/nsp31214D1214DgaCgaT33B.1.1.2220.000612
ORF1ab/nsp31214D1214DgaCgaT33B.1.1.280.000934
ORF1ab/nsp31214D1214NGacAac33B.1.1.5190.000119
ORF1ab/nsp31214D1214DgaCgaT33B.1.1.570.034483
ORF1ab/nsp31214D1214EgaCgaA23B.1.1.70.000002
ORF1ab/nsp31214D1214EgaCgaG13B.1.1.70.000001
ORF1ab/nsp31214D1214YGacTac33B.1.177.160.001993
ORF1ab/nsp31214D1214DgaCgaT33B.1.177.40.000633
ORF1ab/nsp31214D1214DgaCgaT33B.1.177.570.000843
ORF1ab/nsp31214D1214YGacTac33B.1.20.000026
ORF1ab/nsp31214D1214DgaCgaT33B.1.2210.000213
ORF1ab/nsp31214D1214DgaCgaT33B.1.36.290.001552
ORF1ab/nsp31214D1214NGacAac33B.1.4290.000071
ORF1ab/nsp31214D1214DgaCgaT33B.1.4970.000944
ORF1ab/nsp31214D1214DgaCgaT33B.1.5170.001281
ORF1ab/nsp31214D1214DgaCgaT33B.1.6100.010638
ORF1ab/nsp31214D1214EgaCgaA33B.1.617.20.000011
ORF1ab/nsp31214D1214DgaCgaT33C.160.003181
ORF1ab/nsp31214D1214DgaCgaT22A.10.000564
ORF1ab/nsp31214D1214DgaCgaT22A.20.001324
ORF1ab/nsp31214D1214NGacAac22AD.20.000438
ORF1ab/nsp31214D1214NGacAac22AY.1030.000012
ORF1ab/nsp31214D1214DgaCgaT22AY.1090.001479
ORF1ab/nsp31214D1214GgAcgGc22AY.1160.000574
ORF1ab/nsp31214D1214NGacAac22AY.1190.000071
ORF1ab/nsp31214D1214DgaCgaT22AY.120.20.002571
ORF1ab/nsp31214D1214DgaCgaT22AY.1210.000271
ORF1ab/nsp31214D1214delGAC---22AY.1210.000271
ORF1ab/nsp31214D1214delGAC---22AY.230.000139
ORF1ab/nsp31214D1214DgaCgaT22AY.230.000139
ORF1ab/nsp31214D1214RGACAGA22AY.250.000012
ORF1ab/nsp31214D1214delGAC---22AY.290.000032
ORF1ab/nsp31214D1214NGacAac22AY.360.000296
ORF1ab/nsp31214D1214DgaCgaT22AY.39.10.000079
ORF1ab/nsp31214D1214GgAcgGc22AY.440.000012
ORF1ab/nsp31214D1214DgaCgaT22AY.450.000243
ORF1ab/nsp31214D1214DgaCgaT22AY.470.000062
ORF1ab/nsp31214D1214GgAcgGc22AY.510.001818
ORF1ab/nsp31214D1214NGacAac22AY.550.001835
ORF1ab/nsp31214D1214YGacTac22AY.750.000112
ORF1ab/nsp31214D1214DgaCgaT22AY.75.10.000361
ORF1ab/nsp31214D1214DgaCgaT22AY.950.001522
ORF1ab/nsp31214D1214DgaCgaT22AY.980.000158
ORF1ab/nsp31214D1214NGacAac22AY.980.000158
ORF1ab/nsp31214D1214EgaCgaA22AZ.20.001642
ORF1ab/nsp31214D1214DgaCgaT22B0.000256
ORF1ab/nsp31214D1214delGAC---22B.1.10.000036
ORF1ab/nsp31214D1214YGacTac22B.1.10.000036
ORF1ab/nsp31214D1214GgAcgGc22B.1.10.000036
ORF1ab/nsp31214D1214DgaCgaT22B.1.1.1530.002191
ORF1ab/nsp31214D1214DgaCgaT22B.1.1.1760.000879
ORF1ab/nsp31214D1214AgAcgCc22B.1.1.2220.000408
ORF1ab/nsp31214D1214NGacAac22B.1.1.250.001137
ORF1ab/nsp31214D1214GgAcgGc22B.1.1.3890.012121
ORF1ab/nsp31214D1214delGAC---22B.1.1.980.037037
ORF1ab/nsp31214D1214GgAcgGc22B.1.1490.006849
ORF1ab/nsp31214D1214DgaCgaT22B.1.177.320.002699
ORF1ab/nsp31214D1214DgaCgaT22B.1.177.550.004662
ORF1ab/nsp31214D1214DgaCgaT22B.1.177.70.00033
ORF1ab/nsp31214D1214NGacAac22B.1.20.000018
ORF1ab/nsp31214D1214delGAC---22B.1.2210.000142
ORF1ab/nsp31214D1214DgaCgaT22B.1.2340.000264
ORF1ab/nsp31214D1214delGAC---22B.1.2580.000133
ORF1ab/nsp31214D1214DgaCgaT22B.1.3750.001639
ORF1ab/nsp31214D1214DgaCgaT22B.1.3960.001411
ORF1ab/nsp31214D1214DgaCgaT22B.1.4360.002058
ORF1ab/nsp31214D1214DgaCgaT22B.1.438.10.000215
ORF1ab/nsp31214D1214DgaCgaT22B.1.5250.000226
ORF1ab/nsp31214D1214delGAC---22B.1.5250.000226
ORF1ab/nsp31214D1214DgaCgaT22B.1.564.10.003155
ORF1ab/nsp31214D1214NGacAac22B.1.5960.000174
ORF1ab/nsp31214D1214GgAcgGc22B.1.6090.000959
ORF1ab/nsp31214D1214AgAcgCc22B.1.617.20.000008
ORF1ab/nsp31214D1214DgaCgaT22B.1.6220.025974
ORF1ab/nsp31214D1214DgaCgaT22C.10.004785
ORF1ab/nsp31214D1214delGAC---22C.20.032258
ORF1ab/nsp31214D1214DgaCgaT22C.36.3.10.005435
ORF1ab/nsp31214D1214DgaCgaT22D.20.00015
ORF1ab/nsp31214D1214AgAcgCc22P.10.000032
ORF1ab/nsp31214D1214NGacAac22P.10.000032
ORF1ab/nsp31214D1214DgaCgaT22P.1.110.020408
ORF1ab/nsp31214D1214DgaCgaT22P.1.140.000096
ORF1ab/nsp31214D1214YGacTac11A0.000387
ORF1ab/nsp31214D1214GgAcgGc11A.10.000282
ORF1ab/nsp31214D1214AgAcgCc11A.2.40.003367
ORF1ab/nsp31214D1214NGacAac11AA.50.016129
ORF1ab/nsp31214D1214DgaCgaT11AD.20.000219
ORF1ab/nsp31214D1214TGAcACc11All0
ORF1ab/nsp31214D1214XGaCTaA11All0
ORF1ab/nsp31214D1214del1gaCga-11AU.10.001266
ORF1ab/nsp31214D1214DgaCgaT11AY.100.00053
ORF1ab/nsp31214D1214delGAC---11AY.1010.00049
ORF1ab/nsp31214D1214HGacCac11AY.1030.000006
ORF1ab/nsp31214D1214delGAC---11AY.1030.000006
ORF1ab/nsp31214D1214DgaCgaT11AY.1060.000335
ORF1ab/nsp31214D1214delGAC---11AY.1080.001103
ORF1ab/nsp31214D1214YGacTac11AY.1130.000142
ORF1ab/nsp31214D1214DgaCgaT11AY.1130.000142
ORF1ab/nsp31214D1214NGacAac11AY.1180.000063
ORF1ab/nsp31214D1214VgAcgTc11AY.1200.000037
ORF1ab/nsp31214D1214del1Gac-ac11AY.120.10.000321
ORF1ab/nsp31214D1214NGacAac11AY.140.000088
ORF1ab/nsp31214D1214DgaCgaT11AY.16.10.00047
ORF1ab/nsp31214D1214YGacTac11AY.230.00007
ORF1ab/nsp31214D1214delGAC---11AY.240.000431
ORF1ab/nsp31214D1214XGaCTaA11AY.250.000006
ORF1ab/nsp31214D1214GgAcgGc11AY.290.000016
ORF1ab/nsp31214D1214DgaCgaT11AY.29.10.000221
ORF1ab/nsp31214D1214GgAcgGc11AY.30.00001
ORF1ab/nsp31214D1214EgaCgaA11AY.30.00001
ORF1ab/nsp31214D1214YGacTac11AY.3.10.000085
ORF1ab/nsp31214D1214NGacAac11AY.330.000067
ORF1ab/nsp31214D1214delGAC---11AY.330.000067
ORF1ab/nsp31214D1214YGacTac11AY.330.000067
ORF1ab/nsp31214D1214DgaCgaT11AY.34.10.00051
ORF1ab/nsp31214D1214YGacTac11AY.390.000025
ORF1ab/nsp31214D1214SGACTCT11AY.390.000025
ORF1ab/nsp31214D1214GgAcgGc11AY.390.000025
ORF1ab/nsp31214D1214NGacAac11AY.39.10.00004
ORF1ab/nsp31214D1214VgAcgTc11AY.40.000002
ORF1ab/nsp31214D1214del1gaCga-11AY.40.000002
ORF1ab/nsp31214D1214HGacCac11AY.40.000002
ORF1ab/nsp31214D1214NGacAac11AY.4.20.000022
ORF1ab/nsp31214D1214YGacTac11AY.4.20.000022
ORF1ab/nsp31214D1214NGacAac11AY.420.00004
ORF1ab/nsp31214D1214EgaCgaA11AY.430.000004
ORF1ab/nsp31214D1214delGAC---11AY.430.000004
ORF1ab/nsp31214D1214delGAC---11AY.450.000122
ORF1ab/nsp31214D1214delGAC---11AY.460.000104
ORF1ab/nsp31214D1214YGacTac11AY.460.000104
ORF1ab/nsp31214D1214GgAcgGc11AY.460.000104
ORF1ab/nsp31214D1214DgaCgaT11AY.46.40.000165
ORF1ab/nsp31214D1214YGacTac11AY.46.60.000072
ORF1ab/nsp31214D1214GgAcgGc11AY.46.60.000072
ORF1ab/nsp31214D1214delGAC---11AY.470.000031
ORF1ab/nsp31214D1214GgAcgGc11AY.470.000031
ORF1ab/nsp31214D1214delGAC---11AY.490.003195
ORF1ab/nsp31214D1214delGAC---11AY.50.000021
ORF1ab/nsp31214D1214DgaCgaT11AY.5.40.000277
ORF1ab/nsp31214D1214YGacTac11AY.540.000095
ORF1ab/nsp31214D1214DgaCgaT11AY.550.000917
ORF1ab/nsp31214D1214DgaCgaT11AY.560.001605
ORF1ab/nsp31214D1214DgaCgaT11AY.590.00053
ORF1ab/nsp31214D1214YGacTac11AY.630.000387
ORF1ab/nsp31214D1214DgaCgaT11AY.650.000533
ORF1ab/nsp31214D1214DgaCgaT11AY.660.00107
ORF1ab/nsp31214D1214delGAC---11AY.660.00107
ORF1ab/nsp31214D1214AgAcgCc11AY.710.000475
ORF1ab/nsp31214D1214delGAC---11AY.740.000116
ORF1ab/nsp31214D1214NGacAac11AY.750.000056
ORF1ab/nsp31214D1214DgaCgaT11AY.750.000056
ORF1ab/nsp31214D1214NGacAac11AY.75.10.00018
ORF1ab/nsp31214D1214RGACAGG11AY.790.001211
ORF1ab/nsp31214D1214DgaCgaT11AY.850.000427
ORF1ab/nsp31214D1214DgaCgaT11AY.890.004902
ORF1ab/nsp31214D1214EgaCgaA11AY.9.20.000037
ORF1ab/nsp31214D1214DgaCgaT11AY.900.000684
ORF1ab/nsp31214D1214YGacTac11AY.920.000287
ORF1ab/nsp31214D1214DgaCgaT11AY.940.000443
ORF1ab/nsp31214D1214NGacAac11AY.950.000761
ORF1ab/nsp31214D1214DgaCgaT11AY.960.002075
ORF1ab/nsp31214D1214delGAC---11AY.990.001049
ORF1ab/nsp31214D1214YGacTac11AY.99.20.000092
ORF1ab/nsp31214D1214AgAcgCc11AY.99.20.000092
ORF1ab/nsp31214D1214GgAcgGc11AZ.20.000821
ORF1ab/nsp31214D1214DgaCgaT11AZ.30.00152
ORF1ab/nsp31214D1214EgaCgaA11B.10.000009
ORF1ab/nsp31214D1214delGAC---11B.1.1.100.001115
ORF1ab/nsp31214D1214delGAC---11B.1.1.1590.004673
ORF1ab/nsp31214D1214GgAcgGc11B.1.1.1720.018182
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.1890.001513
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.2070.001182
ORF1ab/nsp31214D1214delGAC---11B.1.1.2140.000055
ORF1ab/nsp31214D1214NGacAac11B.1.1.2160.00089
ORF1ab/nsp31214D1214YGacTac11B.1.1.2160.00089
ORF1ab/nsp31214D1214delGAC---11B.1.1.2220.000204
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.2770.000759
ORF1ab/nsp31214D1214YGacTac11B.1.1.280.000311
ORF1ab/nsp31214D1214HGacCac11B.1.1.3060.000438
ORF1ab/nsp31214D1214GgAcgGc11B.1.1.3110.000358
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.3120.001912
ORF1ab/nsp31214D1214GgAcgGc11B.1.1.3120.001912
ORF1ab/nsp31214D1214YGacTac11B.1.1.3180.000302
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.330.000421
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.3350.012987
ORF1ab/nsp31214D1214delGAC---11B.1.1.3480.000796
ORF1ab/nsp31214D1214NGacAac11B.1.1.370.000193
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.3980.003226
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.4060.006494
ORF1ab/nsp31214D1214YGacTac11B.1.1.4090.002833
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.4160.000905
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.4290.004608
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.4320.001266
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.4330.001425
ORF1ab/nsp31214D1214GgAcgGc11B.1.1.4640.001473
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.4870.005587
ORF1ab/nsp31214D1214delGAC---11B.1.1.5190.00004
ORF1ab/nsp31214D1214EgaCgaA11B.1.1.5190.00004
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.5190.00004
ORF1ab/nsp31214D1214delGAC---11B.1.1.520.012195
ORF1ab/nsp31214D1214delGAC---11B.1.1.5240.020833
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.5260.003546
ORF1ab/nsp31214D1214del1gaCga-11B.1.1.70.000001
ORF1ab/nsp31214D1214HGacCac11B.1.1.70.000001
ORF1ab/nsp31214D1214DgaCgaT11B.1.1.740.00431
ORF1ab/nsp31214D1214DgaCgaT11B.1.130.002375
ORF1ab/nsp31214D1214delGAC---11B.1.1600.000031
ORF1ab/nsp31214D1214DgaCgaT11B.1.160.260.002421
ORF1ab/nsp31214D1214DgaCgaT11B.1.1660.008475
ORF1ab/nsp31214D1214EgaCgaA11B.1.1770.000013
ORF1ab/nsp31214D1214GgAcgGc11B.1.1770.000013
ORF1ab/nsp31214D1214YGacTac11B.1.1770.000013
ORF1ab/nsp31214D1214SGACAGT11B.1.1770.000013
ORF1ab/nsp31214D1214YGacTac11B.1.177.180.00116
ORF1ab/nsp31214D1214delGAC---11B.1.177.350.000691
ORF1ab/nsp31214D1214NGacAac11B.1.177.420.000894
ORF1ab/nsp31214D1214delGAC---11B.1.177.450.000381
ORF1ab/nsp31214D1214DgaCgaT11B.1.177.530.002392
ORF1ab/nsp31214D1214GgAcgGc11B.1.177.580.001332
ORF1ab/nsp31214D1214YGacTac11B.1.177.600.000218
ORF1ab/nsp31214D1214DgaCgaT11B.1.177.600.000218
ORF1ab/nsp31214D1214delGAC---11B.1.177.620.001192
ORF1ab/nsp31214D1214GgAcgGc11B.1.177.750.001041
ORF1ab/nsp31214D1214delGAC---11B.1.177.810.000189
ORF1ab/nsp31214D1214DgaCgaT11B.1.177.820.000477
ORF1ab/nsp31214D1214DgaCgaT11B.1.1980.071429
ORF1ab/nsp31214D1214GgAcgGc11B.1.20.000009
ORF1ab/nsp31214D1214delGAC---11B.1.20.000009
ORF1ab/nsp31214D1214EgaCgaA11B.1.2210.000071
ORF1ab/nsp31214D1214HGacCac11B.1.2220.001692
ORF1ab/nsp31214D1214DgaCgaT11B.1.2320.000537
ORF1ab/nsp31214D1214GgAcgGc11B.1.2320.000537
ORF1ab/nsp31214D1214DgaCgaT11B.1.2390.001221
ORF1ab/nsp31214D1214NGacAac11B.1.2430.00007
ORF1ab/nsp31214D1214DgaCgaT11B.1.258.140.00098
ORF1ab/nsp31214D1214delGAC---11B.1.258.170.000104
ORF1ab/nsp31214D1214DgaCgaT11B.1.258.170.000104
ORF1ab/nsp31214D1214YGacTac11B.1.2600.003344
ORF1ab/nsp31214D1214DgaCgaT11B.1.3110.000275
ORF1ab/nsp31214D1214DgaCgaT11B.1.3490.000715
ORF1ab/nsp31214D1214DgaCgaT11B.1.3560.001727
ORF1ab/nsp31214D1214delGAC---11B.1.360.000146
ORF1ab/nsp31214D1214YGacTac11B.1.360.000146
ORF1ab/nsp31214D1214DgaCgaT11B.1.360.000146
ORF1ab/nsp31214D1214DgaCgaT11B.1.36.190.009259
ORF1ab/nsp31214D1214GgAcgGc11B.1.36.70.004
ORF1ab/nsp31214D1214delGAC---11B.1.3820.008929
ORF1ab/nsp31214D1214DgaCgaT11B.1.4160.001269
ORF1ab/nsp31214D1214AgAcgCc11B.1.4160.001269
ORF1ab/nsp31214D1214GgAcgGc11B.1.4280.00102
ORF1ab/nsp31214D1214delGAC---11B.1.428.20.033333
ORF1ab/nsp31214D1214AgAcgCc11B.1.4290.000024
ORF1ab/nsp31214D1214delGAC---11B.1.4290.000024
ORF1ab/nsp31214D1214DgaCgaT11B.1.4530.003236
ORF1ab/nsp31214D1214DgaCgaT11B.1.4620.007246
ORF1ab/nsp31214D1214GgAcgGc11B.1.466.20.000391
ORF1ab/nsp31214D1214NGacAac11B.1.4690.00361
ORF1ab/nsp31214D1214DgaCgaT11B.1.4740.001901
ORF1ab/nsp31214D1214NGacAac11B.1.4990.00105
ORF1ab/nsp31214D1214GgAcgGc11B.1.5130.013889
ORF1ab/nsp31214D1214TGAcACc11B.1.5250.000113
ORF1ab/nsp31214D1214NGacAac11B.1.5260.000024
ORF1ab/nsp31214D1214delGAC---11B.1.5260.000024
ORF1ab/nsp31214D1214DgaCgaT11B.1.5300.007143
ORF1ab/nsp31214D1214GgAcgGc11B.1.5330.009615
ORF1ab/nsp31214D1214delGAC---11B.1.5610.000397
ORF1ab/nsp31214D1214GgAcgGc11B.1.5650.00081
ORF1ab/nsp31214D1214DgaCgaT11B.1.5670.003333
ORF1ab/nsp31214D1214DgaCgaT11B.1.5680.001111
ORF1ab/nsp31214D1214YGacTac11B.1.5950.000261
ORF1ab/nsp31214D1214YGacTac11B.1.5960.000087
ORF1ab/nsp31214D1214DgaCgaT11B.1.5970.00463
ORF1ab/nsp31214D1214DgaCgaT11B.1.6200.000946
ORF1ab/nsp31214D1214YGacTac11B.1.6210.000089
ORF1ab/nsp31214D1214DgaCgaT11B.1.621.10.000506
ORF1ab/nsp31214D1214delGAC---11B.1.6300.005236
ORF1ab/nsp31214D1214DgaCgaT11B.1.6350.017544
ORF1ab/nsp31214D1214DgaCgaT11B.1.6370.000073
ORF1ab/nsp31214D1214YGacTac11B.400.000364
ORF1ab/nsp31214D1214DgaCgaT11B.400.000364
ORF1ab/nsp31214D1214DgaCgaT11B.430.014286
ORF1ab/nsp31214D1214YGacTac11B.60.00091
ORF1ab/nsp31214D1214DgaCgaT11B.60.00091
ORF1ab/nsp31214D1214AgAcgCc11B.60.00091
ORF1ab/nsp31214D1214DgaCgaT11B.6.60.000889
ORF1ab/nsp31214D1214YGacTac11C.350.000774
ORF1ab/nsp31214D1214GgAcgGc11C.370.000116
ORF1ab/nsp31214D1214DgaCgaT11N.50.001767
ORF1ab/nsp31214D1214EgaCgaA11P.10.000016
ORF1ab/nsp31214D1214DgaCgaT11P.1.10.000318
ORF1ab/nsp31214D1214DgaCgaT11P.1.100.000269
ORF1ab/nsp31214D1214NGacAac11P.1.140.000048
ORF1ab/nsp31214D1214GgAcgGc11P.1.140.000048
ORF1ab/nsp31214D1214AgAcgCc11P.1.170.000162
ORF1ab/nsp31214D1214DgaCgaT11P.1.70.000319
ORF1ab/nsp31214D1214NGacAac11P.20.000187
ORF1ab/nsp31214D1214delGAC---11P.20.000187
ORF1ab/nsp31214D1214YGacTac11Q.30.000145
ORF1ab/nsp31214D1214delGAC---11Q.80.000165