CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1212 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31212S1212PS2030PnonsynTcaCca79479416353-6355

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31212S1212PTcaCca794794All0.000152
ORF1ab/nsp31212S1212PTcaCca442442B.1.1.70.000396
ORF1ab/nsp31212S1212PTcaCca115115AY.470.003577
ORF1ab/nsp31212S1212PTcaCca4949AY.250.000295
ORF1ab/nsp31212S1212PTcaCca2626B.1.6210.002301
ORF1ab/nsp31212S1212PTcaCca1919B.1.177.210.001453
ORF1ab/nsp31212S1212PTcaCca1818AY.460.001873
ORF1ab/nsp31212S1212PTcaCca1616B.10.000147
ORF1ab/nsp31212S1212PTcaCca1414Q.80.002309
ORF1ab/nsp31212S1212PTcaCca99AY.290.000142
ORF1ab/nsp31212S1212PTcaCca99AY.430.00004
ORF1ab/nsp31212S1212PTcaCca88P.10.000126
ORF1ab/nsp31212S1212PTcaCca66AY.40.000009
ORF1ab/nsp31212S1212PTcaCca55AV.10.025253
ORF1ab/nsp31212S1212PTcaCca44AY.420.000161
ORF1ab/nsp31212S1212PTcaCca44AY.60.000165
ORF1ab/nsp31212S1212PTcaCca44B.1.2580.000266
ORF1ab/nsp31212S1212PTcaCca33AY.260.000085
ORF1ab/nsp31212S1212PTcaCca33AY.440.000018
ORF1ab/nsp31212S1212PTcaCca33AY.50.000062
ORF1ab/nsp31212S1212PTcaCca33AY.9.20.00011
ORF1ab/nsp31212S1212PTcaCca33B.1.20.000026
ORF1ab/nsp31212S1212PTcaCca33B.110.015385
ORF1ab/nsp31212S1212PTcaCca22AY.650.001066
ORF1ab/nsp31212S1212PTcaCca22B.1.1.250.001137
ORF1ab/nsp31212S1212PTcaCca22R.10.00018
ORF1ab/nsp31212S1212PTcaCca11AY.1030.000006
ORF1ab/nsp31212S1212PTcaCca11AY.1110.000183
ORF1ab/nsp31212S1212PTcaCca11AY.1190.000035
ORF1ab/nsp31212S1212PTcaCca11AY.1200.000037
ORF1ab/nsp31212S1212PTcaCca11AY.29.10.000221
ORF1ab/nsp31212S1212PTcaCca11AY.350.000233
ORF1ab/nsp31212S1212PTcaCca11AY.390.000025
ORF1ab/nsp31212S1212PTcaCca11AY.610.000105
ORF1ab/nsp31212S1212PTcaCca11AY.98.10.000048
ORF1ab/nsp31212S1212PTcaCca11B.1.10.000018
ORF1ab/nsp31212S1212PTcaCca11B.1.1.2980.000862
ORF1ab/nsp31212S1212PTcaCca11B.1.1.3720.000689
ORF1ab/nsp31212S1212PTcaCca11B.1.2340.000132
ORF1ab/nsp31212S1212PTcaCca11B.1.2430.00007
ORF1ab/nsp31212S1212PTcaCca11B.1.3110.000275
ORF1ab/nsp31212S1212PTcaCca11B.1.36.360.000602
ORF1ab/nsp31212S1212PTcaCca11B.1.3710.001122
ORF1ab/nsp31212S1212PTcaCca11B.1.4290.000024
ORF1ab/nsp31212S1212PTcaCca11B.1.5950.000261
ORF1ab/nsp31212S1212PTcaCca11B.1.619.10.000641
ORF1ab/nsp31212S1212PTcaCca11B.460.020833
ORF1ab/nsp31212S1212PTcaCca11P.1.140.000048