CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1210

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31210L1210LL2028LsynCtgTtg772141340.5354236347-6349
ORF1ab/nsp31210L1210LL2028LsynctGctT772130050.3891986347-6349
ORF1ab/nsp31210L1210LL2028LsynctGctA77215260.06812596347-6349
ORF1ab/nsp31210L1210LL2028LsynctGctC7721520.006734886347-6349
ORF1ab/nsp31210L1210LL2028LsynCtGTtA772140.0005180686347-6349
ORF1ab/nsp31210L1210delL2028deldelCTG---10710716347-6349
ORF1ab/nsp31210L1210PL2028PnonsyncTgcCg515116347-6349
ORF1ab/nsp31210L1210ML2028MnonsynCtgAtg323216347-6349
ORF1ab/nsp31210L1210QL2028QnonsyncTgcAg32250.781256347-6349
ORF1ab/nsp31210L1210QL2028QnonsyncTGcAA3270.218756347-6349
ORF1ab/nsp31210L1210RL2028RnonsyncTgcGg6616347-6349
ORF1ab/nsp31210L1210FL2028FnonsynCtGTtT650.8333336347-6349
ORF1ab/nsp31210L1210XL2028XnonsynCTgTAg640.6666676347-6349
ORF1ab/nsp31210L1210XL2028XnonsynCTGTAA620.3333336347-6349
ORF1ab/nsp31210L1210FL2028FnonsynCtGTtC610.1666676347-6349
ORF1ab/nsp31210L1210YL2028YnonsynCTGTAT540.86347-6349
ORF1ab/nsp31210L1210HL2028HnonsyncTGcAT540.86347-6349
ORF1ab/nsp31210L1210YL2028YnonsynCTGTAC510.26347-6349
ORF1ab/nsp31210L1210HL2028HnonsyncTGcAC510.26347-6349
ORF1ab/nsp31210L1210VL2028VnonsynCtgGtg4416347-6349
ORF1ab/nsp31210L1210IL2028InonsynCtGAtT420.56347-6349
ORF1ab/nsp31210L1210IL2028InonsynCtGAtC420.56347-6349
ORF1ab/nsp31210L1210NL2028NnonsynCTGAAT320.6666676347-6349
ORF1ab/nsp31210L1210NL2028NnonsynCTGAAC310.3333336347-6349
ORF1ab/nsp31210L1210KL2028KnonsynCTgAAg2216347-6349
ORF1ab/nsp31210L1210TL2028TnonsynCTGACC1116347-6349
ORF1ab/nsp31210L1210del1L2028del1delctGct-1116347-6349

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31210L1210LCtgTtg41347721All0.000791
ORF1ab/nsp31210L1210LctGctT30057721All0.000575
ORF1ab/nsp31210L1210LctGctA5267721All0.000101
ORF1ab/nsp31210L1210LctGctC527721All0.00001
ORF1ab/nsp31210L1210LCtGTtA47721All0.000001
ORF1ab/nsp31210L1210LCtgTtg19511951AY.4.40.798282
ORF1ab/nsp31210L1210LctGctT16951852AY.40.002638
ORF1ab/nsp31210L1210LCtgTtg1261852AY.40.000196
ORF1ab/nsp31210L1210LctGctC161852AY.40.000025
ORF1ab/nsp31210L1210LctGctA151852AY.40.000023
ORF1ab/nsp31210L1210LCtgTtg257480B.1.1.70.00023
ORF1ab/nsp31210L1210LctGctT133480B.1.1.70.000119
ORF1ab/nsp31210L1210LctGctA86480B.1.1.70.000077
ORF1ab/nsp31210L1210LctGctC4480B.1.1.70.000004
ORF1ab/nsp31210L1210LctGctT325472B.1.20.002862
ORF1ab/nsp31210L1210LCtgTtg133472B.1.20.001171
ORF1ab/nsp31210L1210LctGctC12472B.1.20.000106
ORF1ab/nsp31210L1210LctGctA2472B.1.20.000018
ORF1ab/nsp31210L1210LCtgTtg336345AY.200.013059
ORF1ab/nsp31210L1210LctGctT8345AY.200.000311
ORF1ab/nsp31210L1210LctGctC1345AY.200.000039
ORF1ab/nsp31210L1210LctGctT90207B.1.617.20.000339
ORF1ab/nsp31210L1210LCtgTtg69207B.1.617.20.00026
ORF1ab/nsp31210L1210LctGctA47207B.1.617.20.000177
ORF1ab/nsp31210L1210LctGctC1207B.1.617.20.000004
ORF1ab/nsp31210L1210LCtgTtg197197P.20.036767
ORF1ab/nsp31210L1210LctGctA122191AY.250.000734
ORF1ab/nsp31210L1210LCtgTtg52191AY.250.000313
ORF1ab/nsp31210L1210LctGctT14191AY.250.000084
ORF1ab/nsp31210L1210LCtGTtA2191AY.250.000012
ORF1ab/nsp31210L1210LctGctC1191AY.250.000006
ORF1ab/nsp31210L1210LCtgTtg171171B.1.1.2040.519757
ORF1ab/nsp31210L1210delCTG---107107All0.00002
ORF1ab/nsp31210L1210LctGctT56100AY.430.000248
ORF1ab/nsp31210L1210LCtgTtg30100AY.430.000133
ORF1ab/nsp31210L1210LctGctA14100AY.430.000062
ORF1ab/nsp31210L1210LCtgTtg7888AY.470.002426
ORF1ab/nsp31210L1210LctGctT888AY.470.000249
ORF1ab/nsp31210L1210LctGctA288AY.470.000062
ORF1ab/nsp31210L1210LCtgTtg4882B.1.4290.001129
ORF1ab/nsp31210L1210LctGctT3282B.1.4290.000753
ORF1ab/nsp31210L1210LctGctA282B.1.4290.000047
ORF1ab/nsp31210L1210LCtgTtg7676B.1.177.600.016601
ORF1ab/nsp31210L1210LctGctA3375B.1.1770.000435
ORF1ab/nsp31210L1210LCtgTtg3275B.1.1770.000421
ORF1ab/nsp31210L1210LctGctT1075B.1.1770.000132
ORF1ab/nsp31210L1210LctGctT4073AY.1030.000248
ORF1ab/nsp31210L1210LCtgTtg2973AY.1030.00018
ORF1ab/nsp31210L1210LctGctC273AY.1030.000012
ORF1ab/nsp31210L1210LctGctA273AY.1030.000012
ORF1ab/nsp31210L1210LCtgTtg5657AY.46.50.011111
ORF1ab/nsp31210L1210LctGctA157AY.46.50.000198
ORF1ab/nsp31210L1210PcTgcCg5151All0.00001
ORF1ab/nsp31210L1210LctGctT2751AY.30.000269
ORF1ab/nsp31210L1210LCtgTtg1251AY.30.000119
ORF1ab/nsp31210L1210LctGctA951AY.30.00009
ORF1ab/nsp31210L1210LctGctC251AY.30.00002
ORF1ab/nsp31210L1210LCtGTtA151AY.30.00001
ORF1ab/nsp31210L1210LctGctA4647AY.610.00482
ORF1ab/nsp31210L1210LctGctT147AY.610.000105
ORF1ab/nsp31210L1210LctGctT2547B.10.000229
ORF1ab/nsp31210L1210LCtgTtg2147B.10.000192
ORF1ab/nsp31210L1210LctGctC147B.10.000009
ORF1ab/nsp31210L1210LCtgTtg2845P.10.000441
ORF1ab/nsp31210L1210LctGctT1745P.10.000268
ORF1ab/nsp31210L1210LCtgTtg3544AY.440.000213
ORF1ab/nsp31210L1210LctGctT644AY.440.000037
ORF1ab/nsp31210L1210LctGctA344AY.440.000018
ORF1ab/nsp31210L1210LctGctT4242AY.1070.019571
ORF1ab/nsp31210L1210LctGctT3641B.1.3510.00107
ORF1ab/nsp31210L1210LCtgTtg541B.1.3510.000149
ORF1ab/nsp31210L1210LctGctT3839B.1.1470.028723
ORF1ab/nsp31210L1210LCtgTtg139B.1.1470.000756
ORF1ab/nsp31210L1210LCtgTtg2034B.1.10.000363
ORF1ab/nsp31210L1210LctGctT1034B.1.10.000181
ORF1ab/nsp31210L1210LctGctA434B.1.10.000073
ORF1ab/nsp31210L1210MCtgAtg3232All0.000006
ORF1ab/nsp31210L1210QcTgcAg2532All0.000005
ORF1ab/nsp31210L1210QcTGcAA732All0.000001
ORF1ab/nsp31210L1210LCtgTtg1831B.1.5260.000423
ORF1ab/nsp31210L1210LctGctA831B.1.5260.000188
ORF1ab/nsp31210L1210LctGctT531B.1.5260.000118
ORF1ab/nsp31210L1210LctGctA2828B.1.177.170.022989
ORF1ab/nsp31210L1210LctGctT2424AY.70.004704
ORF1ab/nsp31210L1210LctGctT1723AY.390.00042
ORF1ab/nsp31210L1210LCtgTtg423AY.390.000099
ORF1ab/nsp31210L1210LctGctA223AY.390.000049
ORF1ab/nsp31210L1210LctGctT1922B.1.1.2140.001054
ORF1ab/nsp31210L1210LCtgTtg322B.1.1.2140.000166
ORF1ab/nsp31210L1210LctGctT1522B.1.1.5190.000596
ORF1ab/nsp31210L1210LCtgTtg622B.1.1.5190.000238
ORF1ab/nsp31210L1210LctGctA122B.1.1.5190.00004
ORF1ab/nsp31210L1210LCtgTtg1621AY.340.001551
ORF1ab/nsp31210L1210LctGctT521AY.340.000485
ORF1ab/nsp31210L1210LctGctT1621B.1.1600.000499
ORF1ab/nsp31210L1210LCtgTtg321B.1.1600.000094
ORF1ab/nsp31210L1210LctGctA221B.1.1600.000062
ORF1ab/nsp31210L1210LctGctT1220AY.1020.000318
ORF1ab/nsp31210L1210LCtgTtg820AY.1020.000212
ORF1ab/nsp31210L1210LctGctT1820AY.190.020525
ORF1ab/nsp31210L1210LCtgTtg220AY.190.002281
ORF1ab/nsp31210L1210LCtgTtg1819B.1.1.700.006139
ORF1ab/nsp31210L1210LctGctA119B.1.1.700.000341
ORF1ab/nsp31210L1210LctGctT1919B.1.5610.007543
ORF1ab/nsp31210L1210LCtgTtg918AY.50.000186
ORF1ab/nsp31210L1210LctGctT818AY.50.000165
ORF1ab/nsp31210L1210LctGctA118AY.50.000021
ORF1ab/nsp31210L1210LCtgTtg1217B.1.360.001751
ORF1ab/nsp31210L1210LctGctT517B.1.360.00073
ORF1ab/nsp31210L1210LctGctT1516AY.1000.00069
ORF1ab/nsp31210L1210LCtgTtg116AY.1000.000046
ORF1ab/nsp31210L1210LCtgTtg516AY.4.20.000108
ORF1ab/nsp31210L1210LctGctA516AY.4.20.000108
ORF1ab/nsp31210L1210LctGctC316AY.4.20.000065
ORF1ab/nsp31210L1210LctGctT316AY.4.20.000065
ORF1ab/nsp31210L1210LctGctT1416AY.7.10.001578
ORF1ab/nsp31210L1210LCtgTtg216AY.7.10.000225
ORF1ab/nsp31210L1210delCTG---1616B.1.617.20.00006
ORF1ab/nsp31210L1210LCtgTtg1116C.370.001277
ORF1ab/nsp31210L1210LctGctT516C.370.00058
ORF1ab/nsp31210L1210LctGctA1515AU.20.03632
ORF1ab/nsp31210L1210LCtgTtg715AY.290.00011
ORF1ab/nsp31210L1210LctGctT715AY.290.00011
ORF1ab/nsp31210L1210LctGctA115AY.290.000016
ORF1ab/nsp31210L1210LCtgTtg615AY.330.000401
ORF1ab/nsp31210L1210LctGctT615AY.330.000401
ORF1ab/nsp31210L1210LctGctA315AY.330.0002
ORF1ab/nsp31210L1210LCtgTtg1414AY.550.012844
ORF1ab/nsp31210L1210LctGctA1414B.1.1.1700.017456
ORF1ab/nsp31210L1210delCTG---1414B.1.1.70.000013
ORF1ab/nsp31210L1210delCTG---1313AY.1000.000598
ORF1ab/nsp31210L1210LCtgTtg613AY.260.00017
ORF1ab/nsp31210L1210LctGctT613AY.260.00017
ORF1ab/nsp31210L1210LctGctA113AY.260.000028
ORF1ab/nsp31210L1210LCtgTtg912Q.80.001484
ORF1ab/nsp31210L1210LctGctA212Q.80.00033
ORF1ab/nsp31210L1210LctGctT112Q.80.000165
ORF1ab/nsp31210L1210LctGctT911AY.420.000362
ORF1ab/nsp31210L1210LCtgTtg211AY.420.00008
ORF1ab/nsp31210L1210LctGctT811AY.740.000925
ORF1ab/nsp31210L1210LCtgTtg311AY.740.000347
ORF1ab/nsp31210L1210delCTG---1111B.1.160.140.023305
ORF1ab/nsp31210L1210delCTG---1111B.1.177.30.083969
ORF1ab/nsp31210L1210LctGctA610AY.99.20.000553
ORF1ab/nsp31210L1210LctGctT410AY.99.20.000369
ORF1ab/nsp31210L1210LCtgTtg810B.1.1.10.002614
ORF1ab/nsp31210L1210LctGctT210B.1.1.10.000653
ORF1ab/nsp31210L1210LCtgTtg910B.1.1.3170.003705
ORF1ab/nsp31210L1210LctGctT110B.1.1.3170.000412
ORF1ab/nsp31210L1210LCtgTtg810P.1.170.001294
ORF1ab/nsp31210L1210LctGctT210P.1.170.000324
ORF1ab/nsp31210L1210LCtgTtg89AY.750.000448
ORF1ab/nsp31210L1210LctGctA19AY.750.000056
ORF1ab/nsp31210L1210LCtgTtg59B.1.6210.000443
ORF1ab/nsp31210L1210LctGctA29B.1.6210.000177
ORF1ab/nsp31210L1210LctGctC19B.1.6210.000089
ORF1ab/nsp31210L1210LctGctT19B.1.6210.000089
ORF1ab/nsp31210L1210QcTgcAg88AY.440.000049
ORF1ab/nsp31210L1210LctGctA78AY.670.00325
ORF1ab/nsp31210L1210LCtgTtg18AY.670.000464
ORF1ab/nsp31210L1210LctGctT58AY.90.000338
ORF1ab/nsp31210L1210LCtgTtg38AY.90.000203
ORF1ab/nsp31210L1210QcTgcAg78B.1.1.70.000006
ORF1ab/nsp31210L1210QcTGcAA18B.1.1.70.000001
ORF1ab/nsp31210L1210LctGctT68B.1.2430.000418
ORF1ab/nsp31210L1210LCtgTtg18B.1.2430.00007
ORF1ab/nsp31210L1210LctGctA18B.1.2430.00007
ORF1ab/nsp31210L1210LctGctT88B.1.36.380.013136
ORF1ab/nsp31210L1210PcTgcCg88B.1.4290.000188
ORF1ab/nsp31210L1210LCtgTtg47AY.1200.000149
ORF1ab/nsp31210L1210LctGctT27AY.1200.000074
ORF1ab/nsp31210L1210LctGctC17AY.1200.000037
ORF1ab/nsp31210L1210LctGctT47AY.1210.000541
ORF1ab/nsp31210L1210LCtgTtg37AY.1210.000406
ORF1ab/nsp31210L1210MCtgAtg77B.1.1.70.000006
ORF1ab/nsp31210L1210PcTgcCg77B.1.1.70.000006
ORF1ab/nsp31210L1210LctGctT67B.1.2340.000792
ORF1ab/nsp31210L1210LCtgTtg17B.1.2340.000132
ORF1ab/nsp31210L1210LctGctT77B.1.6280.002467
ORF1ab/nsp31210L1210RcTgcGg66All0.000001
ORF1ab/nsp31210L1210FCtGTtT56All0.000001
ORF1ab/nsp31210L1210XCTgTAg46All0.000001
ORF1ab/nsp31210L1210XCTGTAA26All0
ORF1ab/nsp31210L1210FCtGTtC16All0
ORF1ab/nsp31210L1210MCtgAtg66AY.250.000036
ORF1ab/nsp31210L1210FCtGTtT56AY.250.00003
ORF1ab/nsp31210L1210XCTgTAg46AY.250.000024
ORF1ab/nsp31210L1210QcTgcAg46AY.250.000024
ORF1ab/nsp31210L1210QcTGcAA26AY.250.000012
ORF1ab/nsp31210L1210XCTGTAA26AY.250.000012
ORF1ab/nsp31210L1210FCtGTtC16AY.250.000006
ORF1ab/nsp31210L1210LctGctT36AY.450.000365
ORF1ab/nsp31210L1210LCtgTtg36AY.450.000365
ORF1ab/nsp31210L1210LCtgTtg66AY.710.00285
ORF1ab/nsp31210L1210LctGctA66B.1.1.3710.0625
ORF1ab/nsp31210L1210LctGctA36B.1.5960.000261
ORF1ab/nsp31210L1210LCtgTtg26B.1.5960.000174
ORF1ab/nsp31210L1210LctGctT16B.1.5960.000087
ORF1ab/nsp31210L1210LCtgTtg46D.20.0003
ORF1ab/nsp31210L1210LctGctT26D.20.00015
ORF1ab/nsp31210L1210LCtgTtg56P.1.120.00242
ORF1ab/nsp31210L1210LctGctT16P.1.120.000484
ORF1ab/nsp31210L1210LctGctT46P.1.70.001277
ORF1ab/nsp31210L1210LCtgTtg26P.1.70.000639
ORF1ab/nsp31210L1210HcTGcAT45All0.000001
ORF1ab/nsp31210L1210YCTGTAT45All0.000001
ORF1ab/nsp31210L1210YCTGTAC15All0
ORF1ab/nsp31210L1210HcTGcAC15All0
ORF1ab/nsp31210L1210LCtgTtg55AY.160.001898
ORF1ab/nsp31210L1210YCTGTAT45AY.250.000024
ORF1ab/nsp31210L1210HcTGcAT45AY.250.000024
ORF1ab/nsp31210L1210HcTGcAC15AY.250.000006
ORF1ab/nsp31210L1210YCTGTAC15AY.250.000006
ORF1ab/nsp31210L1210LctGctT45AY.3.10.000341
ORF1ab/nsp31210L1210LCtgTtg15AY.3.10.000085
ORF1ab/nsp31210L1210PcTgcCg55AY.40.000008
ORF1ab/nsp31210L1210LCtgTtg45AY.980.000316
ORF1ab/nsp31210L1210LctGctT15AY.980.000079
ORF1ab/nsp31210L1210LctGctT45AY.98.10.000194
ORF1ab/nsp31210L1210LCtgTtg15AY.98.10.000048
ORF1ab/nsp31210L1210LCtgTtg55B.1.1.3180.001509
ORF1ab/nsp31210L1210LctGctT55B.1.2400.001078
ORF1ab/nsp31210L1210LCtgTtg35B.1.5750.00091
ORF1ab/nsp31210L1210LctGctA15B.1.5750.000303
ORF1ab/nsp31210L1210LctGctT15B.1.5750.000303
ORF1ab/nsp31210L1210LCtgTtg35P.1.140.000143
ORF1ab/nsp31210L1210LctGctC15P.1.140.000048
ORF1ab/nsp31210L1210LctGctT15P.1.140.000048
ORF1ab/nsp31210L1210VCtgGtg44All0.000001
ORF1ab/nsp31210L1210ICtGAtT24All0
ORF1ab/nsp31210L1210ICtGAtC24All0
ORF1ab/nsp31210L1210LCtgTtg24AY.1190.000071
ORF1ab/nsp31210L1210LctGctT24AY.1190.000071
ORF1ab/nsp31210L1210MCtgAtg44AY.30.00004
ORF1ab/nsp31210L1210LctGctT44AY.320.00213
ORF1ab/nsp31210L1210LctGctT44AY.360.000593
ORF1ab/nsp31210L1210LctGctT44AY.39.1.10.002899
ORF1ab/nsp31210L1210LctGctA24AY.620.000871
ORF1ab/nsp31210L1210LCtgTtg24AY.620.000871
ORF1ab/nsp31210L1210LctGctA24AY.75.10.000361
ORF1ab/nsp31210L1210LCtgTtg14AY.75.10.00018
ORF1ab/nsp31210L1210LctGctT14AY.75.10.00018
ORF1ab/nsp31210L1210LctGctA24B0.000256
ORF1ab/nsp31210L1210LctGctC14B0.000128
ORF1ab/nsp31210L1210LctGctT14B0.000128
ORF1ab/nsp31210L1210LctGctT44B.1.1.2770.003035
ORF1ab/nsp31210L1210PcTgcCg44B.1.1600.000125
ORF1ab/nsp31210L1210LctGctT24B.1.2210.000142
ORF1ab/nsp31210L1210LCtgTtg14B.1.2210.000071
ORF1ab/nsp31210L1210LctGctA14B.1.2210.000071
ORF1ab/nsp31210L1210delCTG---44B.1.2340.000528
ORF1ab/nsp31210L1210LctGctT34B.1.36.80.003
ORF1ab/nsp31210L1210LCtgTtg14B.1.36.80.001
ORF1ab/nsp31210L1210LctGctT24B.1.4270.000101
ORF1ab/nsp31210L1210LctGctA14B.1.4270.00005
ORF1ab/nsp31210L1210LCtgTtg14B.1.4270.00005
ORF1ab/nsp31210L1210LCtgTtg44B.1.466.20.001565
ORF1ab/nsp31210L1210LctGctT44B.1.5990.014599
ORF1ab/nsp31210L1210LCtgTtg44B.1.930.003735
ORF1ab/nsp31210L1210delCTG---44P.10.000063
ORF1ab/nsp31210L1210NCTGAAT23All0
ORF1ab/nsp31210L1210NCTGAAC13All0
ORF1ab/nsp31210L1210LCtgTtg33AY.1180.000188
ORF1ab/nsp31210L1210delCTG---33AY.250.000018
ORF1ab/nsp31210L1210ICtGAtT23AY.250.000012
ORF1ab/nsp31210L1210NCTGAAT23AY.250.000012
ORF1ab/nsp31210L1210ICtGAtC13AY.250.000006
ORF1ab/nsp31210L1210NCTGAAC13AY.250.000006
ORF1ab/nsp31210L1210delCTG---33AY.40.000005
ORF1ab/nsp31210L1210PcTgcCg33AY.440.000018
ORF1ab/nsp31210L1210LctGctT23AY.460.000208
ORF1ab/nsp31210L1210LCtgTtg13AY.460.000104
ORF1ab/nsp31210L1210LCtgTtg23AY.9.20.000073
ORF1ab/nsp31210L1210LctGctT13AY.9.20.000037
ORF1ab/nsp31210L1210delCTG---33B.1.1770.00004
ORF1ab/nsp31210L1210LCtgTtg33B.1.177.530.007177
ORF1ab/nsp31210L1210LCtgTtg33B.1.2580.0002
ORF1ab/nsp31210L1210LCtgTtg23B.1.3610.002577
ORF1ab/nsp31210L1210LctGctA13B.1.3610.001289
ORF1ab/nsp31210L1210LCtgTtg33B.1.438.10.000322
ORF1ab/nsp31210L1210MCtgAtg33B.1.5320.018634
ORF1ab/nsp31210L1210LCtgTtg22A.23.10.001408
ORF1ab/nsp31210L1210LctGctC12AD.20.000219
ORF1ab/nsp31210L1210LctGctT12AD.20.000219
ORF1ab/nsp31210L1210KCTgAAg22All0
ORF1ab/nsp31210L1210VCtgGtg22AY.1000.000092
ORF1ab/nsp31210L1210LctGctT22AY.1010.000981
ORF1ab/nsp31210L1210LCtgTtg12AY.1140.000231
ORF1ab/nsp31210L1210LctGctT12AY.1140.000231
ORF1ab/nsp31210L1210LctGctT12AY.130.000161
ORF1ab/nsp31210L1210LctGctA12AY.130.000161
ORF1ab/nsp31210L1210LctGctT22AY.16.10.00094
ORF1ab/nsp31210L1210LCtgTtg12AY.230.00007
ORF1ab/nsp31210L1210LctGctT12AY.230.00007
ORF1ab/nsp31210L1210KCTgAAg22AY.250.000012
ORF1ab/nsp31210L1210LCtgTtg22AY.280.003781
ORF1ab/nsp31210L1210LCtgTtg22AY.39.10.000079
ORF1ab/nsp31210L1210LCtgTtg22AY.4.2.10.000298
ORF1ab/nsp31210L1210LCtgTtg12AY.46.60.000072
ORF1ab/nsp31210L1210LctGctA12AY.46.60.000072
ORF1ab/nsp31210L1210LctGctA22AY.570.001312
ORF1ab/nsp31210L1210LctGctT22AY.60.000082
ORF1ab/nsp31210L1210LctGctA12AY.700.000209
ORF1ab/nsp31210L1210LCtgTtg12AY.700.000209
ORF1ab/nsp31210L1210LctGctT22AY.890.009804
ORF1ab/nsp31210L1210LCtgTtg12AY.910.00073
ORF1ab/nsp31210L1210LctGctT12AY.910.00073
ORF1ab/nsp31210L1210PcTgcCg22B.10.000018
ORF1ab/nsp31210L1210delCTG---22B.10.000018
ORF1ab/nsp31210L1210QcTGcAA22B.10.000018
ORF1ab/nsp31210L1210LCtgTtg22B.1.1.280.000622
ORF1ab/nsp31210L1210LCtgTtg12B.1.1.2840.000107
ORF1ab/nsp31210L1210LctGctT12B.1.1.2840.000107
ORF1ab/nsp31210L1210PcTgcCg22B.1.1.5190.000079
ORF1ab/nsp31210L1210RcTgcGg22B.1.1.70.000002
ORF1ab/nsp31210L1210LCtgTtg22B.1.177.390.030769
ORF1ab/nsp31210L1210LCtgTtg22B.1.177.570.000562
ORF1ab/nsp31210L1210delCTG---22B.1.177.830.002963
ORF1ab/nsp31210L1210LCtgTtg22B.1.1890.008584
ORF1ab/nsp31210L1210LctGctA12B.1.2390.001221
ORF1ab/nsp31210L1210LCtgTtg12B.1.2390.001221
ORF1ab/nsp31210L1210LctGctA22B.1.2410.001623
ORF1ab/nsp31210L1210LCtgTtg22B.1.36.190.018519
ORF1ab/nsp31210L1210LCtgTtg22B.1.4200.020833
ORF1ab/nsp31210L1210LCtgTtg12B.1.617.10.000129
ORF1ab/nsp31210L1210LctGctT12B.1.617.10.000129
ORF1ab/nsp31210L1210PcTgcCg22B.1.617.20.000008
ORF1ab/nsp31210L1210RcTgcGg22B.1.617.20.000008
ORF1ab/nsp31210L1210LCtgTtg22B.1.6370.000146
ORF1ab/nsp31210L1210LCtgTtg22C.260.014706
ORF1ab/nsp31210L1210LctGctT22R.10.00018
ORF1ab/nsp31210L1210PcTgcCg11A0.000387
ORF1ab/nsp31210L1210LctGctT11A.20.000662
ORF1ab/nsp31210L1210LctGctT11A.2.50.000499
ORF1ab/nsp31210L1210del1ctGct-11All0
ORF1ab/nsp31210L1210TCTGACC11All0
ORF1ab/nsp31210L1210MCtgAtg11AM.20.111111
ORF1ab/nsp31210L1210delCTG---11AY.1010.00049
ORF1ab/nsp31210L1210PcTgcCg11AY.1030.000006
ORF1ab/nsp31210L1210LCtgTtg11AY.1050.000643
ORF1ab/nsp31210L1210LctGctT11AY.1060.000335
ORF1ab/nsp31210L1210delCTG---11AY.1080.001103
ORF1ab/nsp31210L1210LctGctT11AY.1090.00074
ORF1ab/nsp31210L1210LCtgTtg11AY.1100.000113
ORF1ab/nsp31210L1210LCtgTtg11AY.1130.000142
ORF1ab/nsp31210L1210PcTgcCg11AY.116.10.000311
ORF1ab/nsp31210L1210PcTgcCg11AY.1170.000085
ORF1ab/nsp31210L1210LctGctT11AY.120.10.000321
ORF1ab/nsp31210L1210LctGctT11AY.120.20.001285
ORF1ab/nsp31210L1210LCtgTtg11AY.140.000088
ORF1ab/nsp31210L1210MCtgAtg11AY.230.00007
ORF1ab/nsp31210L1210delCTG---11AY.230.00007
ORF1ab/nsp31210L1210LCtgTtg11AY.240.000431
ORF1ab/nsp31210L1210PcTgcCg11AY.250.000006
ORF1ab/nsp31210L1210LctGctT11AY.270.000065
ORF1ab/nsp31210L1210MCtgAtg11AY.290.000016
ORF1ab/nsp31210L1210PcTgcCg11AY.290.000016
ORF1ab/nsp31210L1210PcTgcCg11AY.30.00001
ORF1ab/nsp31210L1210ICtGAtC11AY.30.00001
ORF1ab/nsp31210L1210MCtgAtg11AY.3.10.000085
ORF1ab/nsp31210L1210LCtgTtg11AY.300.000396
ORF1ab/nsp31210L1210MCtgAtg11AY.320.000532
ORF1ab/nsp31210L1210delCTG---11AY.330.000067
ORF1ab/nsp31210L1210LCtgTtg11AY.34.10.00051
ORF1ab/nsp31210L1210LCtgTtg11AY.350.000233
ORF1ab/nsp31210L1210QcTgcAg11AY.40.000002
ORF1ab/nsp31210L1210LCtgTtg11AY.4.30.000842
ORF1ab/nsp31210L1210LctGctT11AY.4.50.000107
ORF1ab/nsp31210L1210LctGctT11AY.400.000964
ORF1ab/nsp31210L1210delCTG---11AY.430.000004
ORF1ab/nsp31210L1210PcTgcCg11AY.430.000004
ORF1ab/nsp31210L1210delCTG---11AY.440.000006
ORF1ab/nsp31210L1210PcTgcCg11AY.50.000021
ORF1ab/nsp31210L1210LCtgTtg11AY.530.000288
ORF1ab/nsp31210L1210LctGctA11AY.590.00053
ORF1ab/nsp31210L1210LctGctA11AY.650.000533
ORF1ab/nsp31210L1210delCTG---11AY.660.00107
ORF1ab/nsp31210L1210LctGctT11AY.680.000274
ORF1ab/nsp31210L1210LctGctT11AY.690.000187
ORF1ab/nsp31210L1210delCTG---11AY.740.000116
ORF1ab/nsp31210L1210LctGctT11AY.840.000437
ORF1ab/nsp31210L1210LctGctA11AY.9.10.000084
ORF1ab/nsp31210L1210PcTgcCg11AY.9.20.000037
ORF1ab/nsp31210L1210LCtgTtg11AY.950.000761
ORF1ab/nsp31210L1210delCTG---11AY.990.001049
ORF1ab/nsp31210L1210LctGctT11AY.990.001049
ORF1ab/nsp31210L1210MCtgAtg11AY.99.20.000092
ORF1ab/nsp31210L1210LCtgTtg11AZ.20.000821
ORF1ab/nsp31210L1210PcTgcCg11B0.000128
ORF1ab/nsp31210L1210MCtgAtg11B.10.000009
ORF1ab/nsp31210L1210RcTgcGg11B.10.000009
ORF1ab/nsp31210L1210RcTgcGg11B.1.10.000018
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.1330.008475
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.1530.001095
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.2070.001182
ORF1ab/nsp31210L1210delCTG---11B.1.1.2140.000055
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.2200.001859
ORF1ab/nsp31210L1210LctGctT11B.1.1.2220.000204
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.2280.003049
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.2300.009174
ORF1ab/nsp31210L1210delCTG---11B.1.1.2620.015152
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.2790.001121
ORF1ab/nsp31210L1210delCTG---11B.1.1.3050.003861
ORF1ab/nsp31210L1210LctGctT11B.1.1.3060.000438
ORF1ab/nsp31210L1210MCtgAtg11B.1.1.3120.001912
ORF1ab/nsp31210L1210QcTGcAA11B.1.1.3150.008475
ORF1ab/nsp31210L1210QcTgcAg11B.1.1.3180.000302
ORF1ab/nsp31210L1210delCTG---11B.1.1.3480.000796
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.3770.001381
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.4320.001266
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.4640.001473
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.4670.019231
ORF1ab/nsp31210L1210delCTG---11B.1.1.5190.00004
ORF1ab/nsp31210L1210LctGctC11B.1.1.550.012987
ORF1ab/nsp31210L1210LctGctT11B.1.1.580.005376
ORF1ab/nsp31210L1210LCtgTtg11B.1.1.630.000386
ORF1ab/nsp31210L1210VCtgGtg11B.1.1.70.000001
ORF1ab/nsp31210L1210LctGctT11B.1.1.880.071429
ORF1ab/nsp31210L1210LctGctT11B.1.1.910.166667
ORF1ab/nsp31210L1210LCtgTtg11B.1.110.30.000718
ORF1ab/nsp31210L1210MCtgAtg11B.1.1390.000733
ORF1ab/nsp31210L1210LctGctT11B.1.1570.002985
ORF1ab/nsp31210L1210LctGctT11B.1.160.260.002421
ORF1ab/nsp31210L1210PcTgcCg11B.1.1770.000013
ORF1ab/nsp31210L1210VCtgGtg11B.1.1770.000013
ORF1ab/nsp31210L1210LCtgTtg11B.1.177.150.000631
ORF1ab/nsp31210L1210LctGctT11B.1.177.500.004695
ORF1ab/nsp31210L1210LCtgTtg11B.1.177.60.000977
ORF1ab/nsp31210L1210delCTG---11B.1.177.620.001192
ORF1ab/nsp31210L1210LctGctA11B.1.177.620.001192
ORF1ab/nsp31210L1210delCTG---11B.1.177.750.001041
ORF1ab/nsp31210L1210TCTGACC11B.1.177.830.001481
ORF1ab/nsp31210L1210QcTgcAg11B.1.177.860.000183
ORF1ab/nsp31210L1210LCtgTtg11B.1.1880.016667
ORF1ab/nsp31210L1210QcTGcAA11B.1.20.000009
ORF1ab/nsp31210L1210PcTgcCg11B.1.20.000009
ORF1ab/nsp31210L1210MCtgAtg11B.1.20.000009
ORF1ab/nsp31210L1210LctGctC11B.1.2220.001692
ORF1ab/nsp31210L1210delCTG---11B.1.2580.000067
ORF1ab/nsp31210L1210delCTG---11B.1.258.170.000104
ORF1ab/nsp31210L1210LctGctA11B.1.258.170.000104
ORF1ab/nsp31210L1210PcTgcCg11B.1.2600.003344
ORF1ab/nsp31210L1210LctGctC11B.1.2600.003344
ORF1ab/nsp31210L1210LCtgTtg11B.1.2790.000514
ORF1ab/nsp31210L1210LCtgTtg11B.1.2800.007143
ORF1ab/nsp31210L1210LCtgTtg11B.1.2930.0125
ORF1ab/nsp31210L1210LctGctT11B.1.3110.000275
ORF1ab/nsp31210L1210LctGctT11B.1.3360.002439
ORF1ab/nsp31210L1210LCtgTtg11B.1.351.20.000303
ORF1ab/nsp31210L1210LctGctT11B.1.3560.001727
ORF1ab/nsp31210L1210LctGctA11B.1.36.160.001425
ORF1ab/nsp31210L1210LCtgTtg11B.1.36.210.00216
ORF1ab/nsp31210L1210LctGctT11B.1.36.220.001208
ORF1ab/nsp31210L1210LCtgTtg11B.1.36.360.000602
ORF1ab/nsp31210L1210LctGctA11B.1.3620.001541
ORF1ab/nsp31210L1210LctGctC11B.1.362.20.004717
ORF1ab/nsp31210L1210LCtgTtg11B.1.3810.007812
ORF1ab/nsp31210L1210LctGctA11B.1.4070.035714
ORF1ab/nsp31210L1210LCtGTtA11B.1.4110.003704
ORF1ab/nsp31210L1210delCTG---11B.1.4290.000024
ORF1ab/nsp31210L1210LCtgTtg11B.1.4560.003268
ORF1ab/nsp31210L1210LctGctA11B.1.5170.000427
ORF1ab/nsp31210L1210LCtgTtg11B.1.5240.001406
ORF1ab/nsp31210L1210LCtgTtg11B.1.5250.000113
ORF1ab/nsp31210L1210PcTgcCg11B.1.5250.000113
ORF1ab/nsp31210L1210del1ctGct-11B.1.5250.000113
ORF1ab/nsp31210L1210LCtgTtg11B.1.5650.00081
ORF1ab/nsp31210L1210LctGctT11B.1.5770.000687
ORF1ab/nsp31210L1210LCtgTtg11B.1.5900.004545
ORF1ab/nsp31210L1210LctGctT11B.1.5950.000261
ORF1ab/nsp31210L1210MCtgAtg11B.1.617.10.000129
ORF1ab/nsp31210L1210LCtgTtg11B.1.6200.000946
ORF1ab/nsp31210L1210QcTgcAg11B.1.6210.000089
ORF1ab/nsp31210L1210LctGctT11B.1.621.10.000506
ORF1ab/nsp31210L1210LctGctT11B.1.6250.002353
ORF1ab/nsp31210L1210delCTG---11B.1.6300.005236
ORF1ab/nsp31210L1210LCtgTtg11B.1.6340.003425
ORF1ab/nsp31210L1210LCtgTtg11B.30.000831
ORF1ab/nsp31210L1210PcTgcCg11B.60.00091
ORF1ab/nsp31210L1210PcTgcCg11C.350.000774
ORF1ab/nsp31210L1210LCtgTtg11C.390.018868
ORF1ab/nsp31210L1210MCtgAtg11D.20.000075
ORF1ab/nsp31210L1210PcTgcCg11D.20.000075
ORF1ab/nsp31210L1210QcTgcAg11P.10.000016
ORF1ab/nsp31210L1210delCTG---11P.1.10.000318
ORF1ab/nsp31210L1210LctGctA11P.1.100.000269
ORF1ab/nsp31210L1210QcTgcAg11P.1.10.10.00813
ORF1ab/nsp31210L1210LCtgTtg11P.1.17.10.000875
ORF1ab/nsp31210L1210LCtgTtg11Q.10.000126