CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1206 & Codon = tcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31206S1206SS2024SsyntcGtcT340515610.4584436335-6337

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31206S1206StcGtcT15613405All0.000299
ORF1ab/nsp31206S1206StcGtcT6011075B.1.1.70.000538
ORF1ab/nsp31206S1206StcGtcT6311AY.9.20.00022
ORF1ab/nsp31206S1206StcGtcT99276AY.40.000154
ORF1ab/nsp31206S1206StcGtcT61147B.1.617.20.00023
ORF1ab/nsp31206S1206StcGtcT2995AY.1030.00018
ORF1ab/nsp31206S1206StcGtcT6091AY.30.000597
ORF1ab/nsp31206S1206StcGtcT1389P.1.140.000621
ORF1ab/nsp31206S1206StcGtcT5469B.1.20.000475
ORF1ab/nsp31206S1206StcGtcT2668AY.430.000115
ORF1ab/nsp31206S1206StcGtcT5357B.1.10.000961
ORF1ab/nsp31206S1206StcGtcT2544AY.250.00015
ORF1ab/nsp31206S1206StcGtcT542B.1.1.280.001556
ORF1ab/nsp31206S1206StcGtcT3838B.280.12459
ORF1ab/nsp31206S1206StcGtcT3737B.1.258.170.003847
ORF1ab/nsp31206S1206StcGtcT2236AY.1020.000583
ORF1ab/nsp31206S1206StcGtcT1936B.10.000174
ORF1ab/nsp31206S1206StcGtcT1636P.10.000252
ORF1ab/nsp31206S1206StcGtcT233AY.260.000057
ORF1ab/nsp31206S1206StcGtcT1433AY.440.000085
ORF1ab/nsp31206S1206StcGtcT3333B.1.1.2160.029386
ORF1ab/nsp31206S1206StcGtcT226AY.1190.000071
ORF1ab/nsp31206S1206StcGtcT2424AY.380.011982
ORF1ab/nsp31206S1206StcGtcT1722AY.390.00042
ORF1ab/nsp31206S1206StcGtcT2222B.1.6210.001947
ORF1ab/nsp31206S1206StcGtcT119AY.1060.000335
ORF1ab/nsp31206S1206StcGtcT1818B.1.3670.014263
ORF1ab/nsp31206S1206StcGtcT915B.1.3510.000268
ORF1ab/nsp31206S1206StcGtcT1111AY.610.001153
ORF1ab/nsp31206S1206StcGtcT810B.1.1770.000105
ORF1ab/nsp31206S1206StcGtcT410B.1.4290.000094
ORF1ab/nsp31206S1206StcGtcT910B.1.5260.000212
ORF1ab/nsp31206S1206StcGtcT99AM.21
ORF1ab/nsp31206S1206StcGtcT69B.1.4000.002574
ORF1ab/nsp31206S1206StcGtcT99B.1.5090.007792
ORF1ab/nsp31206S1206StcGtcT68AY.4.20.00013
ORF1ab/nsp31206S1206StcGtcT88B.1.1.3280.135593
ORF1ab/nsp31206S1206StcGtcT17AY.1200.000037
ORF1ab/nsp31206S1206StcGtcT17B.1.1600.000031
ORF1ab/nsp31206S1206StcGtcT37B.1.4700.004213
ORF1ab/nsp31206S1206StcGtcT17B.1.5960.000087
ORF1ab/nsp31206S1206StcGtcT66A0.002322
ORF1ab/nsp31206S1206StcGtcT66AY.10.002374
ORF1ab/nsp31206S1206StcGtcT36AY.200.000117
ORF1ab/nsp31206S1206StcGtcT46AY.290.000063
ORF1ab/nsp31206S1206StcGtcT26AY.460.000208
ORF1ab/nsp31206S1206StcGtcT26AY.50.000041
ORF1ab/nsp31206S1206StcGtcT46AY.99.20.000369
ORF1ab/nsp31206S1206StcGtcT66B.1.1.1890.009077
ORF1ab/nsp31206S1206StcGtcT56B.1.1.2140.000277
ORF1ab/nsp31206S1206StcGtcT46B.1.2430.000278
ORF1ab/nsp31206S1206StcGtcT66P.70.026201
ORF1ab/nsp31206S1206StcGtcT45AY.1180.000251
ORF1ab/nsp31206S1206StcGtcT45B0.000511
ORF1ab/nsp31206S1206StcGtcT45B.1.438.10.000429
ORF1ab/nsp31206S1206StcGtcT35B.1.617.10.000387
ORF1ab/nsp31206S1206StcGtcT34AY.420.000121
ORF1ab/nsp31206S1206StcGtcT44AY.520.003257
ORF1ab/nsp31206S1206StcGtcT44AY.750.000224
ORF1ab/nsp31206S1206StcGtcT44B.1.1.3480.003185
ORF1ab/nsp31206S1206StcGtcT24B.1.360.000292
ORF1ab/nsp31206S1206StcGtcT14B.1.6280.000352
ORF1ab/nsp31206S1206StcGtcT44Q.80.00066
ORF1ab/nsp31206S1206StcGtcT34R.10.00027
ORF1ab/nsp31206S1206StcGtcT23AY.1210.000271
ORF1ab/nsp31206S1206StcGtcT33AY.360.000445
ORF1ab/nsp31206S1206StcGtcT33AY.75.10.000541
ORF1ab/nsp31206S1206StcGtcT13AY.90.000068
ORF1ab/nsp31206S1206StcGtcT23AY.910.001461
ORF1ab/nsp31206S1206StcGtcT23AY.98.10.000097
ORF1ab/nsp31206S1206StcGtcT33B.1.1.3220.026316
ORF1ab/nsp31206S1206StcGtcT33B.1.1.4160.002715
ORF1ab/nsp31206S1206StcGtcT33B.1.177.750.003122
ORF1ab/nsp31206S1206StcGtcT33B.1.2390.003663
ORF1ab/nsp31206S1206StcGtcT22A.23.10.001408
ORF1ab/nsp31206S1206StcGtcT22AM.40.007143
ORF1ab/nsp31206S1206StcGtcT12AY.230.00007
ORF1ab/nsp31206S1206StcGtcT12AY.3.10.000085
ORF1ab/nsp31206S1206StcGtcT22AY.320.001065
ORF1ab/nsp31206S1206StcGtcT12AY.39.10.00004
ORF1ab/nsp31206S1206StcGtcT12AY.5.40.000277
ORF1ab/nsp31206S1206StcGtcT22AY.70.000392
ORF1ab/nsp31206S1206StcGtcT22AY.7.10.000225
ORF1ab/nsp31206S1206StcGtcT22AY.710.00095
ORF1ab/nsp31206S1206StcGtcT22AY.740.000231
ORF1ab/nsp31206S1206StcGtcT22B.1.1.2440.030769
ORF1ab/nsp31206S1206StcGtcT22B.1.1.40.005952
ORF1ab/nsp31206S1206StcGtcT22B.290.007018
ORF1ab/nsp31206S1206StcGtcT22C.10.004785
ORF1ab/nsp31206S1206StcGtcT12P.1.70.000319
ORF1ab/nsp31206S1206StcGtcT11AY.1000.000046
ORF1ab/nsp31206S1206StcGtcT11AY.110.001339
ORF1ab/nsp31206S1206StcGtcT11AY.116.10.000311
ORF1ab/nsp31206S1206StcGtcT11AY.1170.000085
ORF1ab/nsp31206S1206StcGtcT11AY.16.10.00047
ORF1ab/nsp31206S1206StcGtcT11AY.400.000964
ORF1ab/nsp31206S1206StcGtcT11AY.46.60.000072
ORF1ab/nsp31206S1206StcGtcT11AY.60.000041
ORF1ab/nsp31206S1206StcGtcT11AY.600.000938
ORF1ab/nsp31206S1206StcGtcT11AY.620.000436
ORF1ab/nsp31206S1206StcGtcT11AY.720.001361
ORF1ab/nsp31206S1206StcGtcT11B.1.1.1010.01
ORF1ab/nsp31206S1206StcGtcT11B.1.1.1530.001095
ORF1ab/nsp31206S1206StcGtcT11B.1.1.2080.012195
ORF1ab/nsp31206S1206StcGtcT11B.1.1.250.000569
ORF1ab/nsp31206S1206StcGtcT11B.1.1.2980.000862
ORF1ab/nsp31206S1206StcGtcT11B.1.1.470.005348
ORF1ab/nsp31206S1206StcGtcT11B.1.1.80.003584
ORF1ab/nsp31206S1206StcGtcT11B.1.1.890.006061
ORF1ab/nsp31206S1206StcGtcT11B.1.1570.002985
ORF1ab/nsp31206S1206StcGtcT11B.1.177.630.002703
ORF1ab/nsp31206S1206StcGtcT11B.1.177.730.000566
ORF1ab/nsp31206S1206StcGtcT11B.1.177.810.000189
ORF1ab/nsp31206S1206StcGtcT11B.1.177.830.001481
ORF1ab/nsp31206S1206StcGtcT11B.1.3320.003497
ORF1ab/nsp31206S1206StcGtcT11B.1.3360.002439
ORF1ab/nsp31206S1206StcGtcT11B.1.3560.001727
ORF1ab/nsp31206S1206StcGtcT11B.1.36.170.000494
ORF1ab/nsp31206S1206StcGtcT11B.1.36.290.000517
ORF1ab/nsp31206S1206StcGtcT11B.1.3960.000706
ORF1ab/nsp31206S1206StcGtcT11B.1.4270.00005
ORF1ab/nsp31206S1206StcGtcT11B.1.5600.00463
ORF1ab/nsp31206S1206StcGtcT11B.1.5770.000687
ORF1ab/nsp31206S1206StcGtcT11B.1.6310.003367
ORF1ab/nsp31206S1206StcGtcT11C.180.002591
ORF1ab/nsp31206S1206StcGtcT11D.20.000075
ORF1ab/nsp31206S1206StcGtcT11P.1.150.000232
ORF1ab/nsp31206S1206StcGtcT11P.1.170.000162
ORF1ab/nsp31206S1206StcGtcT11P.20.000187