CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1200 & Codon = ccT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31200P1200PP2018PsynccAccT113842940.0008257066317-6319

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31200P1200PccAccT94113842All0.000018
ORF1ab/nsp31200P1200PccAccT5862457P.10.000914
ORF1ab/nsp31200P1200PccAccT220791P.1.140.000096
ORF1ab/nsp31200P1200PccAccT16122P.1.170.000162
ORF1ab/nsp31200P1200PccAccT3861P.1.20.003468
ORF1ab/nsp31200P1200PccAccT3424B.1.1.70.000003
ORF1ab/nsp31200P1200PccAccT1323B.1.1.280.000311
ORF1ab/nsp31200P1200PccAccT191B.10.000009
ORF1ab/nsp31200P1200PccAccT121B.1.617.20.000004
ORF1ab/nsp31200P1200PccAccT512B.1.6210.000443
ORF1ab/nsp31200P1200PccAccT18P.20.000187
ORF1ab/nsp31200P1200PccAccT17AY.250.000006
ORF1ab/nsp31200P1200PccAccT17AY.40.000002
ORF1ab/nsp31200P1200PccAccT56AY.200.000194
ORF1ab/nsp31200P1200PccAccT33AY.30.00003
ORF1ab/nsp31200P1200PccAccT13AY.750.000056
ORF1ab/nsp31200P1200PccAccT12B.1.1.330.000421
ORF1ab/nsp31200P1200PccAccT11AY.1030.000006
ORF1ab/nsp31200P1200PccAccT11AY.4.20.000022
ORF1ab/nsp31200P1200PccAccT11AY.610.000105
ORF1ab/nsp31200P1200PccAccT11B.1.1.700.000341
ORF1ab/nsp31200P1200PccAccT11B.1.2340.000132
ORF1ab/nsp31200P1200PccAccT11B.1.416.10.001563