CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1200 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31200P1200delP2018deldelCCA---292916317-6319

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31200P1200delCCA---2929All0.000006
ORF1ab/nsp31200P1200delCCA---55AY.250.00003
ORF1ab/nsp31200P1200delCCA---44B.1.1770.000053
ORF1ab/nsp31200P1200delCCA---33B.10.000027
ORF1ab/nsp31200P1200delCCA---33B.1.1.70.000003
ORF1ab/nsp31200P1200delCCA---11AY.1010.00049
ORF1ab/nsp31200P1200delCCA---11AY.230.00007
ORF1ab/nsp31200P1200delCCA---11AY.30.00001
ORF1ab/nsp31200P1200delCCA---11AY.390.000025
ORF1ab/nsp31200P1200delCCA---11AY.60.000041
ORF1ab/nsp31200P1200delCCA---11AY.660.00107
ORF1ab/nsp31200P1200delCCA---11AY.850.000427
ORF1ab/nsp31200P1200delCCA---11AY.990.001049
ORF1ab/nsp31200P1200delCCA---11B.1.1.3150.008475
ORF1ab/nsp31200P1200delCCA---11B.1.1.3480.000796
ORF1ab/nsp31200P1200delCCA---11B.1.177.620.001192
ORF1ab/nsp31200P1200delCCA---11B.1.20.000009
ORF1ab/nsp31200P1200delCCA---11B.1.6300.005236
ORF1ab/nsp31200P1200delCCA---11P.10.000016