CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 12

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp312V12VV830VsyngtGgtT322630370.9414142753-2755
ORF1ab/nsp312V12VV830VsyngtGgtA32261430.04432732753-2755
ORF1ab/nsp312V12VV830VsyngtGgtC3226460.01425912753-2755
ORF1ab/nsp312V12MV830MnonsynGtgAtg17117112753-2755
ORF1ab/nsp312V12delV830deldelGTG---616112753-2755
ORF1ab/nsp312V12LV830LnonsynGtgTtg50390.782753-2755
ORF1ab/nsp312V12LV830LnonsynGtgCtg50100.22753-2755
ORF1ab/nsp312V12LV830LnonsynGtGCtT5010.022753-2755
ORF1ab/nsp312V12AV830AnonsyngTggCg292912753-2755
ORF1ab/nsp312V12EV830EnonsyngTggAg12110.9166672753-2755
ORF1ab/nsp312V12EV830EnonsyngTGgAA1210.08333332753-2755
ORF1ab/nsp312V12GV830GnonsyngTggGg3312753-2755
ORF1ab/nsp312V12KV830KnonsynGTgAAg320.6666672753-2755
ORF1ab/nsp312V12del1V830del1delGtg-tg310.3333332753-2755
ORF1ab/nsp312V12KV830KnonsynGTGAAA310.3333332753-2755
ORF1ab/nsp312V12del1V830del1delgTGgC-310.3333332753-2755
ORF1ab/nsp312V12del1V830del1delgtGgt-310.3333332753-2755
ORF1ab/nsp312V12QV830QnonsynGTgCAg2212753-2755
ORF1ab/nsp312V12PV830PnonsynGTgCCg1112753-2755
ORF1ab/nsp312V12IV830InonsynGtGAtA1112753-2755
ORF1ab/nsp312V12del2V830del2delgTGg--1112753-2755
ORF1ab/nsp312V12FV830FnonsynGtGTtT1112753-2755
ORF1ab/nsp312V12DV830DnonsyngTGgAT1112753-2755
ORF1ab/nsp312V12RV830RnonsynGTgAGg1112753-2755

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp312V12VgtGgtT30373226All0.000581
ORF1ab/nsp312V12VgtGgtA1433226All0.000027
ORF1ab/nsp312V12VgtGgtC463226All0.000009
ORF1ab/nsp312V12VgtGgtT670682AY.400.646095
ORF1ab/nsp312V12VgtGgtA6682AY.400.005786
ORF1ab/nsp312V12VgtGgtC6682AY.400.005786
ORF1ab/nsp312V12VgtGgtT468489B.1.1.70.000419
ORF1ab/nsp312V12VgtGgtA20489B.1.1.70.000018
ORF1ab/nsp312V12VgtGgtC1489B.1.1.70.000001
ORF1ab/nsp312V12VgtGgtT340350AY.40.000529
ORF1ab/nsp312V12VgtGgtA9350AY.40.000014
ORF1ab/nsp312V12VgtGgtC1350AY.40.000002
ORF1ab/nsp312V12VgtGgtT320324AY.4.20.00694
ORF1ab/nsp312V12VgtGgtC4324AY.4.20.000087
ORF1ab/nsp312V12MGtgAtg171171All0.000033
ORF1ab/nsp312V12VgtGgtT123123B.1.177.450.046893
ORF1ab/nsp312V12MGtgAtg100100B.1.1.70.00009
ORF1ab/nsp312V12VgtGgtT6784B.10.000614
ORF1ab/nsp312V12VgtGgtC1084B.10.000092
ORF1ab/nsp312V12VgtGgtA784B.10.000064
ORF1ab/nsp312V12VgtGgtT7676AY.1200.002826
ORF1ab/nsp312V12VgtGgtT7475AY.250.000445
ORF1ab/nsp312V12VgtGgtC175AY.250.000006
ORF1ab/nsp312V12VgtGgtA7373B.1.1600.002277
ORF1ab/nsp312V12VgtGgtT6363B.1.5690.913043
ORF1ab/nsp312V12delGTG---6161All0.000012
ORF1ab/nsp312V12VgtGgtT5656B.1.2430.003897
ORF1ab/nsp312V12VgtGgtT4053AY.430.000177
ORF1ab/nsp312V12VgtGgtC1353AY.430.000058
ORF1ab/nsp312V12LGtgTtg3950All0.000007
ORF1ab/nsp312V12LGtgCtg1050All0.000002
ORF1ab/nsp312V12LGtGCtT150All0
ORF1ab/nsp312V12VgtGgtT4649B.1.1770.000606
ORF1ab/nsp312V12VgtGgtA349B.1.1770.00004
ORF1ab/nsp312V12VgtGgtT4143B.1.617.20.000154
ORF1ab/nsp312V12VgtGgtC243B.1.617.20.000008
ORF1ab/nsp312V12VgtGgtT4141B.1.20.000361
ORF1ab/nsp312V12VgtGgtT3237AY.1030.000199
ORF1ab/nsp312V12VgtGgtC337AY.1030.000019
ORF1ab/nsp312V12VgtGgtA237AY.1030.000012
ORF1ab/nsp312V12VgtGgtT3131AY.440.000189
ORF1ab/nsp312V12VgtGgtT3131B.1.1.2630.048287
ORF1ab/nsp312V12AgTggCg2929All0.000006
ORF1ab/nsp312V12VgtGgtT2727AY.290.000426
ORF1ab/nsp312V12VgtGgtT2626AY.9.20.000955
ORF1ab/nsp312V12VgtGgtT2424B.1.2400.005174
ORF1ab/nsp312V12VgtGgtT2124P.10.000331
ORF1ab/nsp312V12VgtGgtA324P.10.000047
ORF1ab/nsp312V12VgtGgtT2020AY.130.00322
ORF1ab/nsp312V12VgtGgtT1719AY.30.000169
ORF1ab/nsp312V12VgtGgtC119AY.30.00001
ORF1ab/nsp312V12VgtGgtA119AY.30.00001
ORF1ab/nsp312V12AgTggCg1717B.1.1.70.000015
ORF1ab/nsp312V12LGtgTtg1515AY.40.000023
ORF1ab/nsp312V12VgtGgtT1515B.1.177.570.004215
ORF1ab/nsp312V12VgtGgtT1414B.1.10.000254
ORF1ab/nsp312V12VgtGgtT1414B.1.1.390.007136
ORF1ab/nsp312V12VgtGgtT1313AY.50.000268
ORF1ab/nsp312V12EgTggAg1112All0.000002
ORF1ab/nsp312V12EgTGgAA112All0
ORF1ab/nsp312V12MGtgAtg1212AY.40.000019
ORF1ab/nsp312V12VgtGgtT1212AY.99.20.001106
ORF1ab/nsp312V12LGtgCtg712B.1.1.70.000006
ORF1ab/nsp312V12LGtgTtg412B.1.1.70.000004
ORF1ab/nsp312V12LGtGCtT112B.1.1.70.000001
ORF1ab/nsp312V12delGTG---1111B.10.000101
ORF1ab/nsp312V12VgtGgtT1010AY.260.000283
ORF1ab/nsp312V12VgtGgtT1010B.1.351.50.005995
ORF1ab/nsp312V12VgtGgtT99AY.1170.000761
ORF1ab/nsp312V12VgtGgtT99P.20.00168
ORF1ab/nsp312V12VgtGgtT88AY.390.000198
ORF1ab/nsp312V12VgtGgtT88AY.740.000925
ORF1ab/nsp312V12VgtGgtT88B.1.1.3540.035088
ORF1ab/nsp312V12MGtgAtg88B.1.617.20.00003
ORF1ab/nsp312V12VgtGgtT77AY.200.000272
ORF1ab/nsp312V12VgtGgtT77AY.29.10.001544
ORF1ab/nsp312V12VgtGgtT77B.1.1.2320.012704
ORF1ab/nsp312V12VgtGgtT77B.1.1.370.00135
ORF1ab/nsp312V12VgtGgtT77B.1.1.4320.008861
ORF1ab/nsp312V12VgtGgtT77B.1.5260.000165
ORF1ab/nsp312V12delGTG---66B.1.1.70.000005
ORF1ab/nsp312V12VgtGgtT66B.1.6090.002876
ORF1ab/nsp312V12VgtGgtT66C.36.30.003403
ORF1ab/nsp312V12VgtGgtT55AY.1060.001674
ORF1ab/nsp312V12VgtGgtT55AY.4.2.10.000745
ORF1ab/nsp312V12MGtgAtg55AY.46.50.000992
ORF1ab/nsp312V12VgtGgtA55B.1.1.1570.004566
ORF1ab/nsp312V12VgtGgtT55B.1.1.2160.004452
ORF1ab/nsp312V12VgtGgtT55B.1.1.2220.00102
ORF1ab/nsp312V12VgtGgtT55B.1.351.20.001513
ORF1ab/nsp312V12VgtGgtT55P.1.100.001347
ORF1ab/nsp312V12delGTG---440.222222
ORF1ab/nsp312V12VgtGgtA44AY.120.10.001284
ORF1ab/nsp312V12MGtgAtg44AY.290.000063
ORF1ab/nsp312V12MGtgAtg44AY.4.20.000087
ORF1ab/nsp312V12MGtgAtg44AY.430.000018
ORF1ab/nsp312V12VgtGgtT44AY.450.000487
ORF1ab/nsp312V12VgtGgtT44AY.46.60.000289
ORF1ab/nsp312V12VgtGgtT44AY.700.000834
ORF1ab/nsp312V12VgtGgtT34B.1.1.2140.000166
ORF1ab/nsp312V12VgtGgtA14B.1.1.2140.000055
ORF1ab/nsp312V12VgtGgtT44B.1.36.80.004
ORF1ab/nsp312V12MGtgAtg44B.1.5260.000094
ORF1ab/nsp312V12VgtGgtT44B.1.621.10.002023
ORF1ab/nsp312V12VgtGgtT44C.370.000464
ORF1ab/nsp312V12VgtGgtT33A.2.50.001497
ORF1ab/nsp312V12GgTggGg33All0.000001
ORF1ab/nsp312V12KGTgAAg23All0
ORF1ab/nsp312V12del1gTGgC-13All0
ORF1ab/nsp312V12del1Gtg-tg13All0
ORF1ab/nsp312V12del1gtGgt-13All0
ORF1ab/nsp312V12KGTGAAA13All0
ORF1ab/nsp312V12LGtgTtg33AY.1030.000019
ORF1ab/nsp312V12MGtgAtg33AY.1030.000019
ORF1ab/nsp312V12VgtGgtT23AY.1190.000071
ORF1ab/nsp312V12VgtGgtA13AY.1190.000035
ORF1ab/nsp312V12VgtGgtT33AY.320.001597
ORF1ab/nsp312V12VgtGgtT33AY.4.50.000322
ORF1ab/nsp312V12VgtGgtT33AY.98.10.000145
ORF1ab/nsp312V12delGTG---33B.1.10.000054
ORF1ab/nsp312V12delGTG---33B.1.1.330.001263
ORF1ab/nsp312V12EgTggAg23B.1.1.70.000002
ORF1ab/nsp312V12EgTGgAA13B.1.1.70.000001
ORF1ab/nsp312V12delGTG---33B.1.1770.00004
ORF1ab/nsp312V12VgtGgtT33B.1.2140.010989
ORF1ab/nsp312V12VgtGgtT33B.1.3510.000089
ORF1ab/nsp312V12delGTG---33B.1.4290.000071
ORF1ab/nsp312V12VgtGgtT33B.1.5250.000339
ORF1ab/nsp312V12VgtGgtT33B.1.617.10.000387
ORF1ab/nsp312V12VgtGgtT33B.1.930.002801
ORF1ab/nsp312V12VgtGgtT33C.360.002732
ORF1ab/nsp312V12VgtGgtA23P.1.140.000096
ORF1ab/nsp312V12VgtGgtT13P.1.140.000048
ORF1ab/nsp312V12MGtgAtg220.111111
ORF1ab/nsp312V12LGtgTtg220.111111
ORF1ab/nsp312V12QGTgCAg22All0
ORF1ab/nsp312V12MGtgAtg22AY.200.000078
ORF1ab/nsp312V12VgtGgtT22AY.230.000139
ORF1ab/nsp312V12MGtgAtg22AY.250.000012
ORF1ab/nsp312V12VgtGgtT22AY.340.000194
ORF1ab/nsp312V12VgtGgtT22AY.370.000632
ORF1ab/nsp312V12AgTggCg22AY.40.000003
ORF1ab/nsp312V12MGtgAtg22AY.440.000012
ORF1ab/nsp312V12VgtGgtT22AY.60.000082
ORF1ab/nsp312V12VgtGgtT22AY.750.000112
ORF1ab/nsp312V12MGtgAtg22AY.840.000875
ORF1ab/nsp312V12LGtgTtg12B.10.000009
ORF1ab/nsp312V12LGtgCtg12B.10.000009
ORF1ab/nsp312V12AgTggCg22B.1.10.000036
ORF1ab/nsp312V12MGtgAtg22B.1.10.000036
ORF1ab/nsp312V12VgtGgtT12B.1.1.10.000327
ORF1ab/nsp312V12VgtGgtC12B.1.1.10.000327
ORF1ab/nsp312V12VgtGgtT22B.1.1.250.001137
ORF1ab/nsp312V12VgtGgtT22B.1.1.3120.003824
ORF1ab/nsp312V12delGTG---22B.1.1.3150.016949
ORF1ab/nsp312V12VgtGgtT22B.1.1.3200.036364
ORF1ab/nsp312V12delGTG---22B.1.1.3480.001592
ORF1ab/nsp312V12VgtGgtT22B.1.1.3480.001592
ORF1ab/nsp312V12VgtGgtT22B.1.1.5190.000079
ORF1ab/nsp312V12KGTGAAA12B.1.1.70.000001
ORF1ab/nsp312V12KGTgAAg12B.1.1.70.000001
ORF1ab/nsp312V12VgtGgtT22B.1.177.70.00033
ORF1ab/nsp312V12VgtGgtT22B.1.177.810.000379
ORF1ab/nsp312V12LGtgCtg12B.1.20.000009
ORF1ab/nsp312V12LGtgTtg12B.1.20.000009
ORF1ab/nsp312V12LGtgTtg22B.1.2210.000142
ORF1ab/nsp312V12VgtGgtT22B.1.3490.00143
ORF1ab/nsp312V12VgtGgtT22B.1.36.190.018519
ORF1ab/nsp312V12VgtGgtT22B.1.36.290.001035
ORF1ab/nsp312V12delGTG---22B.1.4240.016129
ORF1ab/nsp312V12VgtGgtT22B.1.4520.027397
ORF1ab/nsp312V12VgtGgtT22B.30.001661
ORF1ab/nsp312V12VgtGgtT22C.80.008929
ORF1ab/nsp312V12delGTG---22N.60.014184
ORF1ab/nsp312V12delGTG---22P.10.000032
ORF1ab/nsp312V12VgtGgtT22P.1.150.000465
ORF1ab/nsp312V12VgtGgtT22P.1.17.10.00175
ORF1ab/nsp312V12VgtGgtT22P.1.40.001953
ORF1ab/nsp312V12VgtGgtT22Q.80.00033
ORF1ab/nsp312V12delGTG---11A0.000387
ORF1ab/nsp312V12VgtGgtT11A.2.5.10.004808
ORF1ab/nsp312V12LGtgTtg11AD.20.000219
ORF1ab/nsp312V12del2gTGg--11All0
ORF1ab/nsp312V12RGTgAGg11All0
ORF1ab/nsp312V12IGtGAtA11All0
ORF1ab/nsp312V12FGtGTtT11All0
ORF1ab/nsp312V12DgTGgAT11All0
ORF1ab/nsp312V12PGTgCCg11All0
ORF1ab/nsp312V12MGtgAtg11AY.10.000396
ORF1ab/nsp312V12VgtGgtT11AY.1010.00049
ORF1ab/nsp312V12MGtgAtg11AY.1020.000027
ORF1ab/nsp312V12KGTgAAg11AY.1030.000006
ORF1ab/nsp312V12EgTggAg11AY.1090.00074
ORF1ab/nsp312V12MGtgAtg11AY.1100.000113
ORF1ab/nsp312V12del2gTGg--11AY.1110.000183
ORF1ab/nsp312V12MGtgAtg11AY.1130.000142
ORF1ab/nsp312V12VgtGgtC11AY.120.20.001285
ORF1ab/nsp312V12VgtGgtT11AY.190.00114
ORF1ab/nsp312V12delGTG---11AY.190.00114
ORF1ab/nsp312V12LGtgTtg11AY.200.000039
ORF1ab/nsp312V12VgtGgtT11AY.23.10.000417
ORF1ab/nsp312V12delGTG---11AY.250.000006
ORF1ab/nsp312V12LGtgTtg11AY.250.000006
ORF1ab/nsp312V12VgtGgtT11AY.270.000065
ORF1ab/nsp312V12MGtgAtg11AY.30.00001
ORF1ab/nsp312V12GgTggGg11AY.30.00001
ORF1ab/nsp312V12VgtGgtT11AY.34.10.00051
ORF1ab/nsp312V12VgtGgtT11AY.380.000499
ORF1ab/nsp312V12del1Gtg-tg11AY.390.000025
ORF1ab/nsp312V12MGtgAtg11AY.390.000025
ORF1ab/nsp312V12MGtgAtg11AY.39.10.00004
ORF1ab/nsp312V12VgtGgtT11AY.4.10.000737
ORF1ab/nsp312V12LGtgTtg11AY.4.20.000022
ORF1ab/nsp312V12delGTG---11AY.400.000964
ORF1ab/nsp312V12VgtGgtT11AY.420.00004
ORF1ab/nsp312V12LGtgTtg11AY.430.000004
ORF1ab/nsp312V12AgTggCg11AY.430.000004
ORF1ab/nsp312V12EgTggAg11AY.430.000004
ORF1ab/nsp312V12PGTgCCg11AY.440.000006
ORF1ab/nsp312V12LGtgTtg11AY.440.000006
ORF1ab/nsp312V12AgTggCg11AY.440.000006
ORF1ab/nsp312V12VgtGgtT11AY.460.000104
ORF1ab/nsp312V12VgtGgtT11AY.470.000031
ORF1ab/nsp312V12VgtGgtT11AY.5.30.000337
ORF1ab/nsp312V12delGTG---11AY.60.000041
ORF1ab/nsp312V12MGtgAtg11AY.60.000041
ORF1ab/nsp312V12EgTggAg11AY.610.000105
ORF1ab/nsp312V12VgtGgtT11AY.610.000105
ORF1ab/nsp312V12delGTG---11AY.680.000274
ORF1ab/nsp312V12MGtgAtg11AY.750.000056
ORF1ab/nsp312V12VgtGgtT11AY.90.000068
ORF1ab/nsp312V12delGTG---11AY.9.20.000037
ORF1ab/nsp312V12VgtGgtT11AY.920.000287
ORF1ab/nsp312V12VgtGgtT11AY.940.000443
ORF1ab/nsp312V12VgtGgtC11AY.960.002075
ORF1ab/nsp312V12VgtGgtT11AY.980.000079
ORF1ab/nsp312V12EgTggAg11AY.98.10.000048
ORF1ab/nsp312V12LGtgTtg11AY.98.10.000048
ORF1ab/nsp312V12delGTG---11AY.98.10.000048
ORF1ab/nsp312V12VgtGgtT11B0.000128
ORF1ab/nsp312V12FGtGTtT11B.10.000009
ORF1ab/nsp312V12AgTggCg11B.10.000009
ORF1ab/nsp312V12del1gTGgC-11B.10.000009
ORF1ab/nsp312V12MGtgAtg11B.10.000009
ORF1ab/nsp312V12VgtGgtT11B.1.1.1410.002012
ORF1ab/nsp312V12VgtGgtT11B.1.1.2040.00304
ORF1ab/nsp312V12VgtGgtT11B.1.1.2790.001121
ORF1ab/nsp312V12VgtGgtT11B.1.1.2820.011628
ORF1ab/nsp312V12VgtGgtT11B.1.1.2970.002237
ORF1ab/nsp312V12VgtGgtT11B.1.1.2980.000862
ORF1ab/nsp312V12AgTggCg11B.1.1.3060.000438
ORF1ab/nsp312V12VgtGgtT11B.1.1.3060.000438
ORF1ab/nsp312V12VgtGgtT11B.1.1.3260.001761
ORF1ab/nsp312V12VgtGgtT11B.1.1.3290.003846
ORF1ab/nsp312V12VgtGgtT11B.1.1.330.000421
ORF1ab/nsp312V12GgTggGg11B.1.1.3690.000446
ORF1ab/nsp312V12delGTG---11B.1.1.4160.000905
ORF1ab/nsp312V12VgtGgtT11B.1.1.4340.000349
ORF1ab/nsp312V12delGTG---11B.1.1.460.004367
ORF1ab/nsp312V12VgtGgtT11B.1.1.520.012195
ORF1ab/nsp312V12LGtgTtg11B.1.1.530.013699
ORF1ab/nsp312V12VgtGgtT11B.1.1.560.017857
ORF1ab/nsp312V12GgTggGg11B.1.1.70.000001
ORF1ab/nsp312V12IGtGAtA11B.1.1.70.000001
ORF1ab/nsp312V12delGTG---11B.1.1.700.000341
ORF1ab/nsp312V12VgtGgtA11B.1.160.140.002119
ORF1ab/nsp312V12VgtGgtA11B.1.160.330.004425
ORF1ab/nsp312V12LGtgTtg11B.1.1770.000013
ORF1ab/nsp312V12MGtgAtg11B.1.1770.000013
ORF1ab/nsp312V12VgtGgtT11B.1.177.120.000152
ORF1ab/nsp312V12VgtGgtT11B.1.177.180.00116
ORF1ab/nsp312V12VgtGgtT11B.1.177.200.001517
ORF1ab/nsp312V12VgtGgtT11B.1.177.440.000519
ORF1ab/nsp312V12MGtgAtg11B.1.177.440.000519
ORF1ab/nsp312V12VgtGgtT11B.1.177.50.001242
ORF1ab/nsp312V12delGTG---11B.1.177.510.004566
ORF1ab/nsp312V12VgtGgtT11B.1.177.520.001757
ORF1ab/nsp312V12DgTGgAT11B.1.177.730.000566
ORF1ab/nsp312V12del1gtGgt-11B.1.20.000009
ORF1ab/nsp312V12EgTggAg11B.1.20.000009
ORF1ab/nsp312V12AgTggCg11B.1.20.000009
ORF1ab/nsp312V12RGTgAGg11B.1.20.000009
ORF1ab/nsp312V12VgtGgtA11B.1.2210.000071
ORF1ab/nsp312V12MGtgAtg11B.1.2340.000132
ORF1ab/nsp312V12LGtgTtg11B.1.2580.000067
ORF1ab/nsp312V12VgtGgtT11B.1.258.170.000104
ORF1ab/nsp312V12VgtGgtT11B.1.3010.005917
ORF1ab/nsp312V12VgtGgtC11B.1.3380.008621
ORF1ab/nsp312V12QGTgCAg11B.1.3510.00003
ORF1ab/nsp312V12EgTggAg11B.1.3510.00003
ORF1ab/nsp312V12LGtgCtg11B.1.3510.00003
ORF1ab/nsp312V12EgTggAg11B.1.351.20.000303
ORF1ab/nsp312V12EgTggAg11B.1.351.30.000876
ORF1ab/nsp312V12VgtGgtA11B.1.360.000146
ORF1ab/nsp312V12VgtGgtT11B.1.36.270.000763
ORF1ab/nsp312V12VgtGgtT11B.1.36.310.001751
ORF1ab/nsp312V12VgtGgtT11B.1.3720.010989
ORF1ab/nsp312V12VgtGgtT11B.1.3960.000706
ORF1ab/nsp312V12VgtGgtT11B.1.4000.000429
ORF1ab/nsp312V12VgtGgtT11B.1.4150.014286
ORF1ab/nsp312V12VgtGgtT11B.1.4250.002994
ORF1ab/nsp312V12VgtGgtT11B.1.4270.00005
ORF1ab/nsp312V12VgtGgtT11B.1.4350.011364
ORF1ab/nsp312V12VgtGgtT11B.1.438.10.000107
ORF1ab/nsp312V12VgtGgtT11B.1.4590.004082
ORF1ab/nsp312V12delGTG---11B.1.5260.000024
ORF1ab/nsp312V12VgtGgtT11B.1.5600.00463
ORF1ab/nsp312V12delGTG---11B.1.5610.000397
ORF1ab/nsp312V12delGTG---11B.1.5760.000907
ORF1ab/nsp312V12VgtGgtA11B.1.5800.004065
ORF1ab/nsp312V12VgtGgtT11B.1.5950.000261
ORF1ab/nsp312V12VgtGgtA11B.1.5960.000087
ORF1ab/nsp312V12QGTgCAg11B.1.617.20.000004
ORF1ab/nsp312V12LGtgTtg11B.1.617.20.000004
ORF1ab/nsp312V12MGtgAtg11B.1.6210.000089
ORF1ab/nsp312V12VgtGgtT11B.1.6210.000089
ORF1ab/nsp312V12delGTG---11B.1.621.10.000506
ORF1ab/nsp312V12VgtGgtT11B.1.6250.002353
ORF1ab/nsp312V12VgtGgtT11B.1.6370.000073
ORF1ab/nsp312V12delGTG---11B.570.015152
ORF1ab/nsp312V12AgTggCg11B.60.00091
ORF1ab/nsp312V12AgTggCg11B.6.60.000889
ORF1ab/nsp312V12EgTggAg11C.360.000911
ORF1ab/nsp312V12VgtGgtT11C.37.10.002618
ORF1ab/nsp312V12AgTggCg11D.20.000075
ORF1ab/nsp312V12VgtGgtT11D.30.005917
ORF1ab/nsp312V12VgtGgtT11N.70.029412
ORF1ab/nsp312V12VgtGgtT11P.1.10.000318
ORF1ab/nsp312V12delGTG---11P.1.150.000232
ORF1ab/nsp312V12VgtGgtT11P.1.160.000374
ORF1ab/nsp312V12MGtgAtg11P.1.170.000162
ORF1ab/nsp312V12VgtGgtT11P.1.170.000162
ORF1ab/nsp312V12VgtGgtT11P.1.20.001156
ORF1ab/nsp312V12VgtGgtT11P.60.003145
ORF1ab/nsp312V12VgtGgtT11Q.10.000126

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.