CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1198 & Codon = Tca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31198T1198ST2016SnonsynAcaTca363616311-6313

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31198T1198SAcaTca3636All0.000007
ORF1ab/nsp31198T1198SAcaTca1010B.1.1.70.000009
ORF1ab/nsp31198T1198SAcaTca77B.1.360.001021
ORF1ab/nsp31198T1198SAcaTca55AY.40.000008
ORF1ab/nsp31198T1198SAcaTca22AY.1130.000285
ORF1ab/nsp31198T1198SAcaTca22AY.1170.000169
ORF1ab/nsp31198T1198SAcaTca11A.20.000662
ORF1ab/nsp31198T1198SAcaTca11AY.200.000039
ORF1ab/nsp31198T1198SAcaTca11AY.250.000006
ORF1ab/nsp31198T1198SAcaTca11AY.260.000028
ORF1ab/nsp31198T1198SAcaTca11AY.300.000396
ORF1ab/nsp31198T1198SAcaTca11B.1.177.440.000519
ORF1ab/nsp31198T1198SAcaTca11B.1.4620.007246
ORF1ab/nsp31198T1198SAcaTca11B.1.5950.000261
ORF1ab/nsp31198T1198SAcaTca11B.1.617.20.000004
ORF1ab/nsp31198T1198SAcaTca11P.10.000016