CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1198 & Codon = Gca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31198T1198AT2016AnonsynAcaGca696916311-6313

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31198T1198AAcaGca6969All0.000013
ORF1ab/nsp31198T1198AAcaGca1212AY.1030.000075
ORF1ab/nsp31198T1198AAcaGca1111B.1.1.70.00001
ORF1ab/nsp31198T1198AAcaGca1010B.10.000092
ORF1ab/nsp31198T1198AAcaGca66AY.40.000009
ORF1ab/nsp31198T1198AAcaGca66B.1.5260.000141
ORF1ab/nsp31198T1198AAcaGca44AY.440.000024
ORF1ab/nsp31198T1198AAcaGca22AY.3.10.000171
ORF1ab/nsp31198T1198AAcaGca22B.1.1.1370.025
ORF1ab/nsp31198T1198AAcaGca22B.1.4290.000047
ORF1ab/nsp31198T1198AAcaGca22B.1.6210.000177
ORF1ab/nsp31198T1198AAcaGca11AY.1020.000027
ORF1ab/nsp31198T1198AAcaGca11AY.1050.000643
ORF1ab/nsp31198T1198AAcaGca11AY.430.000004
ORF1ab/nsp31198T1198AAcaGca11AY.90.000068
ORF1ab/nsp31198T1198AAcaGca11AY.980.000079
ORF1ab/nsp31198T1198AAcaGca11B.1.1.4020.011111
ORF1ab/nsp31198T1198AAcaGca11B.1.1.4090.002833
ORF1ab/nsp31198T1198AAcaGca11B.1.1.5190.00004
ORF1ab/nsp31198T1198AAcaGca11B.1.1770.000013
ORF1ab/nsp31198T1198AAcaGca11B.1.214.20.0006
ORF1ab/nsp31198T1198AAcaGca11D.20.000075
ORF1ab/nsp31198T1198AAcaGca11P.10.000016