CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1179 & Codon = gTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31179A1179VA1997VnonsyngCagTa788578580.9965766254-6256

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31179A1179VgCagTa78587885All0.001503
ORF1ab/nsp31179A1179VgCagTa25532578B.1.1.70.002286
ORF1ab/nsp31179A1179VgCagTa13091309B.1.36.270.999237
ORF1ab/nsp31179A1179VgCagTa488488AY.40.00076
ORF1ab/nsp31179A1179VgCagTa317317B.1.360.04625
ORF1ab/nsp31179A1179VgCagTa259259B.1.617.20.000975
ORF1ab/nsp31179A1179VgCagTa218218AY.860.180913
ORF1ab/nsp31179A1179VgCagTa204204AY.30.002029
ORF1ab/nsp31179A1179VgCagTa187187AY.250.001125
ORF1ab/nsp31179A1179VgCagTa170170B.1.4290.004
ORF1ab/nsp31179A1179VgCagTa167167AY.440.001016
ORF1ab/nsp31179A1179VgCagTa142142AY.1020.003765
ORF1ab/nsp31179A1179VgCagTa131131B.1.2790.067283
ORF1ab/nsp31179A1179VgCagTa120121B.10.001099
ORF1ab/nsp31179A1179VgCagTa118118AY.430.000523
ORF1ab/nsp31179A1179VgCagTa113113B.1.20.000995
ORF1ab/nsp31179A1179VgCagTa109109B.1.177.120.016535
ORF1ab/nsp31179A1179VgCagTa103103AY.1030.00064
ORF1ab/nsp31179A1179VgCagTa7272B.1.5260.001692
ORF1ab/nsp31179A1179VgCagTa4949AY.290.000773
ORF1ab/nsp31179A1179VgCagTa4849P.10.000756
ORF1ab/nsp31179A1179VgCagTa4444AY.46.60.003177
ORF1ab/nsp31179A1179VgCagTa4242AY.9.20.001543
ORF1ab/nsp31179A1179VgCagTa3333AY.390.000815
ORF1ab/nsp31179A1179VgCagTa2626AY.50.000537
ORF1ab/nsp31179A1179VgCagTa2626B.1.10.000472
ORF1ab/nsp31179A1179VgCagTa2525B.1.1770.000329
ORF1ab/nsp31179A1179VgCagTa2525B.1.3510.000743
ORF1ab/nsp31179A1179VgCagTa2525B.1.36.90.080386
ORF1ab/nsp31179A1179VgCagTa2424G.11
ORF1ab/nsp31179A1179VgCagTa2323AY.99.20.00212
ORF1ab/nsp31179A1179VgCagTa2222B.1.2210.001563
ORF1ab/nsp31179A1179VgCagTa1919AY.98.10.00092
ORF1ab/nsp31179A1179VgCagTa1717AY.330.001135
ORF1ab/nsp31179A1179VgCagTa1717B.1.1.4160.015385
ORF1ab/nsp31179A1179VgCagTa1515AY.60.000617
ORF1ab/nsp31179A1179VgCagTa1414AY.470.000435
ORF1ab/nsp31179A1179VgCagTa1212B.1.2430.000835
ORF1ab/nsp31179A1179VgCagTa1212B.1.5360.285714
ORF1ab/nsp31179A1179VgCagTa1111AY.4.20.000239
ORF1ab/nsp31179A1179VgCagTa1010AY.200.000389
ORF1ab/nsp31179A1179VgCagTa1010B.1.177.320.013495
ORF1ab/nsp31179A1179VgCagTa99A0.003483
ORF1ab/nsp31179A1179VgCagTa99A.2.50.004491
ORF1ab/nsp31179A1179VgCagTa99AD.20.001971
ORF1ab/nsp31179A1179VgCagTa99AY.46.20.005718
ORF1ab/nsp31179A1179VgCagTa99AY.46.40.001481
ORF1ab/nsp31179A1179VgCagTa99B.1.1.5190.000357
ORF1ab/nsp31179A1179VgCagTa99B.550.026549
ORF1ab/nsp31179A1179VgCagTa88AY.1190.000282
ORF1ab/nsp31179A1179VgCagTa88AY.410.002352
ORF1ab/nsp31179A1179VgCagTa88B.1.1600.00025
ORF1ab/nsp31179A1179VgCagTa88B.1.177.620.009535
ORF1ab/nsp31179A1179VgCagTa88B.1.177.810.001515
ORF1ab/nsp31179A1179VgCagTa88B.1.4270.000404
ORF1ab/nsp31179A1179VgCagTa77AY.1000.000322
ORF1ab/nsp31179A1179VgCagTa77AY.230.000488
ORF1ab/nsp31179A1179VgCagTa77AY.260.000198
ORF1ab/nsp31179A1179VgCagTa77AY.39.10.000277
ORF1ab/nsp31179A1179VgCagTa77B.1.1.390.003568
ORF1ab/nsp31179A1179VgCagTa77C.370.000812
ORF1ab/nsp31179A1179VgCagTa77Q.10.000884
ORF1ab/nsp31179A1179VgCagTa66AY.360.000889
ORF1ab/nsp31179A1179VgCagTa66AY.460.000624
ORF1ab/nsp31179A1179VgCagTa66B.1.1.1380.036364
ORF1ab/nsp31179A1179VgCagTa66B.1.2580.000399
ORF1ab/nsp31179A1179VgCagTa66C.350.004644
ORF1ab/nsp31179A1179VgCagTa66D.20.00045
ORF1ab/nsp31179A1179VgCagTa66P.1.140.000287
ORF1ab/nsp31179A1179VgCagTa66P.20.00112
ORF1ab/nsp31179A1179VgCagTa55A.2.5.20.007862
ORF1ab/nsp31179A1179VgCagTa55AY.1170.000423
ORF1ab/nsp31179A1179VgCagTa55AY.4.50.000537
ORF1ab/nsp31179A1179VgCagTa55AY.510.004545
ORF1ab/nsp31179A1179VgCagTa55AY.850.002136
ORF1ab/nsp31179A1179VgCagTa55B0.000639
ORF1ab/nsp31179A1179VgCagTa55B.1.1.3170.002058
ORF1ab/nsp31179A1179VgCagTa55B.1.1.4200.00503
ORF1ab/nsp31179A1179VgCagTa44AY.1010.001962
ORF1ab/nsp31179A1179VgCagTa44AY.1130.00057
ORF1ab/nsp31179A1179VgCagTa44AY.340.000388
ORF1ab/nsp31179A1179VgCagTa44AY.4.30.003367
ORF1ab/nsp31179A1179VgCagTa44AY.420.000161
ORF1ab/nsp31179A1179VgCagTa44AY.650.002132
ORF1ab/nsp31179A1179VgCagTa44AY.7.10.000451
ORF1ab/nsp31179A1179VgCagTa44AY.840.00175
ORF1ab/nsp31179A1179VgCagTa44AY.980.000316
ORF1ab/nsp31179A1179VgCagTa44B.1.1.2310.012384
ORF1ab/nsp31179A1179VgCagTa44B.1.1.330.001684
ORF1ab/nsp31179A1179VgCagTa44B.1.177.830.005926
ORF1ab/nsp31179A1179VgCagTa44B.1.3610.005155
ORF1ab/nsp31179A1179VgCagTa44B.1.4680.022857
ORF1ab/nsp31179A1179VgCagTa44B.1.5660.076923
ORF1ab/nsp31179A1179VgCagTa44B.1.6370.000292
ORF1ab/nsp31179A1179VgCagTa44Q.30.00058
ORF1ab/nsp31179A1179VgCagTa33AY.1050.001929
ORF1ab/nsp31179A1179VgCagTa33AY.1160.00086
ORF1ab/nsp31179A1179VgCagTa33AY.1180.000188
ORF1ab/nsp31179A1179VgCagTa33AY.1200.000112
ORF1ab/nsp31179A1179VgCagTa33AY.130.000483
ORF1ab/nsp31179A1179VgCagTa33AY.29.10.000662
ORF1ab/nsp31179A1179VgCagTa33AY.350.000699
ORF1ab/nsp31179A1179VgCagTa33AY.610.000314
ORF1ab/nsp31179A1179VgCagTa33AY.930.000819
ORF1ab/nsp31179A1179VgCagTa33B.1.1.10.00098
ORF1ab/nsp31179A1179VgCagTa33B.1.1.1410.006036
ORF1ab/nsp31179A1179VgCagTa33B.1.1.2160.002671
ORF1ab/nsp31179A1179VgCagTa33B.1.1.2220.000612
ORF1ab/nsp31179A1179VgCagTa33B.1.1390.002199
ORF1ab/nsp31179A1179VgCagTa33B.1.177.210.000229
ORF1ab/nsp31179A1179VgCagTa33B.1.177.570.000843
ORF1ab/nsp31179A1179VgCagTa33B.1.22.10.09375
ORF1ab/nsp31179A1179VgCagTa33B.1.2340.000396
ORF1ab/nsp31179A1179VgCagTa33B.1.2400.000647
ORF1ab/nsp31179A1179VgCagTa33B.1.258.170.000312
ORF1ab/nsp31179A1179VgCagTa33B.1.2600.010033
ORF1ab/nsp31179A1179VgCagTa33B.1.3620.004622
ORF1ab/nsp31179A1179VgCagTa33B.1.3810.023438
ORF1ab/nsp31179A1179VgCagTa33B.1.438.10.000322
ORF1ab/nsp31179A1179VgCagTa33B.1.466.20.001174
ORF1ab/nsp31179A1179VgCagTa33B.1.617.10.000387
ORF1ab/nsp31179A1179VgCagTa33C.140.012987
ORF1ab/nsp31179A1179VgCagTa33P.1.150.000697
ORF1ab/nsp31179A1179VgCagTa22AY.270.000129
ORF1ab/nsp31179A1179VgCagTa22AY.5.30.000675
ORF1ab/nsp31179A1179VgCagTa22AY.5.40.000553
ORF1ab/nsp31179A1179VgCagTa22AY.760.009662
ORF1ab/nsp31179A1179VgCagTa22B.1.1.280.000622
ORF1ab/nsp31179A1179VgCagTa22B.1.1.4340.000697
ORF1ab/nsp31179A1179VgCagTa22B.1.1.500.001358
ORF1ab/nsp31179A1179VgCagTa22B.1.1.830.00542
ORF1ab/nsp31179A1179VgCagTa22B.1.177.440.001038
ORF1ab/nsp31179A1179VgCagTa22B.1.177.70.00033
ORF1ab/nsp31179A1179VgCagTa22B.1.221.10.005814
ORF1ab/nsp31179A1179VgCagTa22B.1.3110.000549
ORF1ab/nsp31179A1179VgCagTa22B.1.36.100.009569
ORF1ab/nsp31179A1179VgCagTa22B.1.36.160.002849
ORF1ab/nsp31179A1179VgCagTa22B.1.36.390.004435
ORF1ab/nsp31179A1179VgCagTa22B.1.416.10.003125
ORF1ab/nsp31179A1179VgCagTa22B.1.5250.000226
ORF1ab/nsp31179A1179VgCagTa22B.1.6090.000959
ORF1ab/nsp31179A1179VgCagTa22C.260.014706
ORF1ab/nsp31179A1179VgCagTa22C.360.001821
ORF1ab/nsp31179A1179VgCagTa22C.36.30.001134
ORF1ab/nsp31179A1179VgCagTa22P.1.10.000635
ORF1ab/nsp31179A1179VgCagTa22P.1.170.000324
ORF1ab/nsp31179A1179VgCagTa22P.1.70.000639
ORF1ab/nsp31179A1179VgCagTa22P.70.008734
ORF1ab/nsp31179A1179VgCagTa22Q.80.00033
ORF1ab/nsp31179A1179VgCagTa22R.10.00018
ORF1ab/nsp31179A1179VgCagTa11AY.10.000396
ORF1ab/nsp31179A1179VgCagTa11AY.1100.000113
ORF1ab/nsp31179A1179VgCagTa11AY.1110.000183
ORF1ab/nsp31179A1179VgCagTa11AY.116.10.000311
ORF1ab/nsp31179A1179VgCagTa11AY.120.10.000321
ORF1ab/nsp31179A1179VgCagTa11AY.240.000431
ORF1ab/nsp31179A1179VgCagTa11AY.300.000396
ORF1ab/nsp31179A1179VgCagTa11AY.34.10.00051
ORF1ab/nsp31179A1179VgCagTa11AY.4.2.10.000149
ORF1ab/nsp31179A1179VgCagTa11AY.4.40.000409
ORF1ab/nsp31179A1179VgCagTa11AY.570.000656
ORF1ab/nsp31179A1179VgCagTa11AY.680.000274
ORF1ab/nsp31179A1179VgCagTa11AY.700.000209
ORF1ab/nsp31179A1179VgCagTa11AY.710.000475
ORF1ab/nsp31179A1179VgCagTa11AY.730.000665
ORF1ab/nsp31179A1179VgCagTa11AY.750.000056
ORF1ab/nsp31179A1179VgCagTa11AY.80.000606
ORF1ab/nsp31179A1179VgCagTa11AY.880.000884
ORF1ab/nsp31179A1179VgCagTa11AY.90.000068
ORF1ab/nsp31179A1179VgCagTa11AY.9.10.000084
ORF1ab/nsp31179A1179VgCagTa11AY.920.000287
ORF1ab/nsp31179A1179VgCagTa11AY.940.000443
ORF1ab/nsp31179A1179VgCagTa11B.1.1.100.001115
ORF1ab/nsp31179A1179VgCagTa11B.1.1.1170.009709
ORF1ab/nsp31179A1179VgCagTa11B.1.1.1960.005714
ORF1ab/nsp31179A1179VgCagTa11B.1.1.2370.005405
ORF1ab/nsp31179A1179VgCagTa11B.1.1.2730.006757
ORF1ab/nsp31179A1179VgCagTa11B.1.1.2770.000759
ORF1ab/nsp31179A1179VgCagTa11B.1.1.2940.001266
ORF1ab/nsp31179A1179VgCagTa11B.1.1.3060.000438
ORF1ab/nsp31179A1179VgCagTa11B.1.1.3480.000796
ORF1ab/nsp31179A1179VgCagTa11B.1.1.40.002976
ORF1ab/nsp31179A1179VgCagTa11B.1.110.30.000718
ORF1ab/nsp31179A1179VgCagTa11B.1.1110.001175
ORF1ab/nsp31179A1179VgCagTa11B.1.160.310.008065
ORF1ab/nsp31179A1179VgCagTa11B.1.177.330.001645
ORF1ab/nsp31179A1179VgCagTa11B.1.177.430.001477
ORF1ab/nsp31179A1179VgCagTa11B.1.177.450.000381
ORF1ab/nsp31179A1179VgCagTa11B.1.177.730.000566
ORF1ab/nsp31179A1179VgCagTa11B.1.2100.002132
ORF1ab/nsp31179A1179VgCagTa11B.1.221.30.000833
ORF1ab/nsp31179A1179VgCagTa11B.1.3040.023256
ORF1ab/nsp31179A1179VgCagTa11B.1.3460.001311
ORF1ab/nsp31179A1179VgCagTa11B.1.36.190.009259
ORF1ab/nsp31179A1179VgCagTa11B.1.36.210.00216
ORF1ab/nsp31179A1179VgCagTa11B.1.36.220.001208
ORF1ab/nsp31179A1179VgCagTa11B.1.36.260.002857
ORF1ab/nsp31179A1179VgCagTa11B.1.36.310.001751
ORF1ab/nsp31179A1179VgCagTa11B.1.36.340.021277
ORF1ab/nsp31179A1179VgCagTa11B.1.36.360.000602
ORF1ab/nsp31179A1179VgCagTa11B.1.3670.000792
ORF1ab/nsp31179A1179VgCagTa11B.1.3710.001122
ORF1ab/nsp31179A1179VgCagTa11B.1.3830.009009
ORF1ab/nsp31179A1179VgCagTa11B.1.3950.007042
ORF1ab/nsp31179A1179VgCagTa11B.1.3960.000706
ORF1ab/nsp31179A1179VgCagTa11B.1.4090.000781
ORF1ab/nsp31179A1179VgCagTa11B.1.4160.001269
ORF1ab/nsp31179A1179VgCagTa11B.1.4280.00102
ORF1ab/nsp31179A1179VgCagTa11B.1.4560.003268
ORF1ab/nsp31179A1179VgCagTa11B.1.4590.004082
ORF1ab/nsp31179A1179VgCagTa11B.1.4930.025641
ORF1ab/nsp31179A1179VgCagTa11B.1.5210.004975
ORF1ab/nsp31179A1179VgCagTa11B.1.5370.02
ORF1ab/nsp31179A1179VgCagTa11B.1.5510.00129
ORF1ab/nsp31179A1179VgCagTa11B.1.5680.001111
ORF1ab/nsp31179A1179VgCagTa11B.1.5750.000303
ORF1ab/nsp31179A1179VgCagTa11B.1.5880.00091
ORF1ab/nsp31179A1179VgCagTa11B.1.5950.000261
ORF1ab/nsp31179A1179VgCagTa11B.1.6200.000946
ORF1ab/nsp31179A1179VgCagTa11B.1.6210.000089
ORF1ab/nsp31179A1179VgCagTa11B.310.003731
ORF1ab/nsp31179A1179VgCagTa11B.400.000364
ORF1ab/nsp31179A1179VgCagTa11C.300.001727
ORF1ab/nsp31179A1179VgCagTa11P.1.20.001156
ORF1ab/nsp31179A1179VgCagTa11P.30.001595