CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 117 & Codon = Tat

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3117D117YD935YnonsynGatTat1511500.9933783068-3070

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3117D117YGatTat150151All0.000029
ORF1ab/nsp3117D117YGatTat3636AY.390.00089
ORF1ab/nsp3117D117YGatTat2020AY.250.00012
ORF1ab/nsp3117D117YGatTat1111B.1.617.20.000041
ORF1ab/nsp3117D117YGatTat88AY.40.000012
ORF1ab/nsp3117D117YGatTat88B.10.000073
ORF1ab/nsp3117D117YGatTat77AY.3.10.000597
ORF1ab/nsp3117D117YGatTat55B.1.1.70.000004
ORF1ab/nsp3117D117YGatTat55B.1.4290.000118
ORF1ab/nsp3117D117YGatTat44AY.1000.000184
ORF1ab/nsp3117D117YGatTat44AY.4.2.10.000596
ORF1ab/nsp3117D117YGatTat44AY.430.000018
ORF1ab/nsp3117D117YGatTat44B.1.1.4340.001394
ORF1ab/nsp3117D117YGatTat33AY.440.000018
ORF1ab/nsp3117D117YGatTat33B.1.3510.000089
ORF1ab/nsp3117D117YGatTat22AY.1020.000053
ORF1ab/nsp3117D117YGatTat22AY.1030.000012
ORF1ab/nsp3117D117YGatTat22AY.1080.002205
ORF1ab/nsp3117D117YGatTat22AY.1210.000271
ORF1ab/nsp3117D117YGatTat22B.1.621.10.001012
ORF1ab/nsp3117D117YGatTat11AY.1190.000035
ORF1ab/nsp3117D117YGatTat11AY.200.000039
ORF1ab/nsp3117D117YGatTat11AY.230.00007
ORF1ab/nsp3117D117YGatTat11AY.330.000067
ORF1ab/nsp3117D117YGatTat11AY.4.20.000022
ORF1ab/nsp3117D117YGatTat11AY.46.60.000072
ORF1ab/nsp3117D117YGatTat11AY.470.000031
ORF1ab/nsp3117D117YGatTat11AY.7.10.000113
ORF1ab/nsp3117D117YGatTat11B.1.1.5190.00004
ORF1ab/nsp3117D117YGatTat11B.1.177.100.000878
ORF1ab/nsp3117D117YGatTat11B.1.20.000009
ORF1ab/nsp3117D117YGatTat11B.1.2210.000071
ORF1ab/nsp3117D117YGatTat11B.1.2580.000067
ORF1ab/nsp3117D117YGatTat11B.1.5260.000024
ORF1ab/nsp3117D117YGatTat11B.1.5600.00463
ORF1ab/nsp3117D117YGatTat11B.1.5820.000491
ORF1ab/nsp3117D117YGatTat11B.1.6090.000479
ORF1ab/nsp3117D117YGatTat11D.20.000075