CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1142 & Codon = ttT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31142F1142FF1960FsynttCttT7041704116143-6145

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31142F1142FttCttT70417041All0.001347
ORF1ab/nsp31142F1142FttCttT14881488AY.60.061199
ORF1ab/nsp31142F1142FttCttT12211221B.1.1.70.001093
ORF1ab/nsp31142F1142FttCttT890890B.1.1.1570.812785
ORF1ab/nsp31142F1142FttCttT401401AY.250.002412
ORF1ab/nsp31142F1142FttCttT228228B.1.617.20.000859
ORF1ab/nsp31142F1142FttCttT209209AY.40.000325
ORF1ab/nsp31142F1142FttCttT205205B.1.20.001805
ORF1ab/nsp31142F1142FttCttT185185B.1.177.400.953608
ORF1ab/nsp31142F1142FttCttT142142AY.1030.000882
ORF1ab/nsp31142F1142FttCttT139139AY.430.000616
ORF1ab/nsp31142F1142FttCttT122122B.1.5880.11101
ORF1ab/nsp31142F1142FttCttT117117B.10.001072
ORF1ab/nsp31142F1142FttCttT100100C.160.106045
ORF1ab/nsp31142F1142FttCttT9191AY.440.000554
ORF1ab/nsp31142F1142FttCttT8383B.1.360.01211
ORF1ab/nsp31142F1142FttCttT6161AY.330.004073
ORF1ab/nsp31142F1142FttCttT5757P.10.000898
ORF1ab/nsp31142F1142FttCttT5353AY.30.000527
ORF1ab/nsp31142F1142FttCttT5252B.1.1600.001622
ORF1ab/nsp31142F1142FttCttT4444B.1.1770.000579
ORF1ab/nsp31142F1142FttCttT4040AY.50.000826
ORF1ab/nsp31142F1142FttCttT3838AY.1210.005142
ORF1ab/nsp31142F1142FttCttT3838B.1.10.000689
ORF1ab/nsp31142F1142FttCttT3535AY.1080.038589
ORF1ab/nsp31142F1142FttCttT3535B.1.2240.875
ORF1ab/nsp31142F1142FttCttT3333AY.1020.000875
ORF1ab/nsp31142F1142FttCttT3232AY.1200.00119
ORF1ab/nsp31142F1142FttCttT3232AY.260.000906
ORF1ab/nsp31142F1142FttCttT3030B.1.428.21
ORF1ab/nsp31142F1142FttCttT2929AY.290.000457
ORF1ab/nsp31142F1142FttCttT2828B.1.2580.001863
ORF1ab/nsp31142F1142FttCttT2727AY.99.20.002488
ORF1ab/nsp31142F1142FttCttT2727B.1.1.3200.490909
ORF1ab/nsp31142F1142FttCttT2626AY.100.013778
ORF1ab/nsp31142F1142FttCttT2222AY.200.000855
ORF1ab/nsp31142F1142FttCttT2020B.1.177.520.035149
ORF1ab/nsp31142F1142FttCttT2020B.1.4270.00101
ORF1ab/nsp31142F1142FttCttT2020B.1.4290.000471
ORF1ab/nsp31142F1142FttCttT1919AY.1000.000874
ORF1ab/nsp31142F1142FttCttT1919AY.46.60.001372
ORF1ab/nsp31142F1142FttCttT1818AY.230.001255
ORF1ab/nsp31142F1142FttCttT1818B.1.1.5190.000715
ORF1ab/nsp31142F1142FttCttT1818B.1.1280.011436
ORF1ab/nsp31142F1142FttCttT1818P.1.140.00086
ORF1ab/nsp31142F1142FttCttT1717B.1.5260.0004
ORF1ab/nsp31142F1142FttCttT1414AY.850.00598
ORF1ab/nsp31142F1142FttCttT1414B.1.3510.000416
ORF1ab/nsp31142F1142FttCttT1313B.1.3240.020867
ORF1ab/nsp31142F1142FttCttT1212AY.390.000297
ORF1ab/nsp31142F1142FttCttT1111AY.120.003477
ORF1ab/nsp31142F1142FttCttT1010AY.450.001217
ORF1ab/nsp31142F1142FttCttT1010D.20.00075
ORF1ab/nsp31142F1142FttCttT99AY.4.20.000195
ORF1ab/nsp31142F1142FttCttT99B.1.1.2140.000499
ORF1ab/nsp31142F1142FttCttT88A.2.50.003992
ORF1ab/nsp31142F1142FttCttT88AY.1180.000501
ORF1ab/nsp31142F1142FttCttT88AY.420.000322
ORF1ab/nsp31142F1142FttCttT88AY.46.40.001316
ORF1ab/nsp31142F1142FttCttT88AY.5.30.002699
ORF1ab/nsp31142F1142FttCttT77AY.1190.000247
ORF1ab/nsp31142F1142FttCttT77AY.750.000392
ORF1ab/nsp31142F1142FttCttT77AY.9.10.000586
ORF1ab/nsp31142F1142FttCttT77B.1.177.570.001967
ORF1ab/nsp31142F1142FttCttT77P.1.150.001626
ORF1ab/nsp31142F1142FttCttT77Y.10.089744
ORF1ab/nsp31142F1142FttCttT66AY.460.000624
ORF1ab/nsp31142F1142FttCttT66AY.540.000572
ORF1ab/nsp31142F1142FttCttT66B.1.1.280.001867
ORF1ab/nsp31142F1142FttCttT55AY.1170.000423
ORF1ab/nsp31142F1142FttCttT55AY.270.000324
ORF1ab/nsp31142F1142FttCttT55AY.3.10.000426
ORF1ab/nsp31142F1142FttCttT55AY.370.00158
ORF1ab/nsp31142F1142FttCttT55AY.470.000156
ORF1ab/nsp31142F1142FttCttT55AY.98.10.000242
ORF1ab/nsp31142F1142FttCttT55B.1.1.3060.002192
ORF1ab/nsp31142F1142FttCttT55B.1.2430.000348
ORF1ab/nsp31142F1142FttCttT55B.1.617.10.000645
ORF1ab/nsp31142F1142FttCttT55P.1.70.001596
ORF1ab/nsp31142F1142FttCttT44AY.1060.00134
ORF1ab/nsp31142F1142FttCttT44AY.550.00367
ORF1ab/nsp31142F1142FttCttT44AY.670.001857
ORF1ab/nsp31142F1142FttCttT44B.1.1.10.001307
ORF1ab/nsp31142F1142FttCttT44B.1.177.860.000734
ORF1ab/nsp31142F1142FttCttT44B.1.2320.002149
ORF1ab/nsp31142F1142FttCttT44B.1.351.20.00121
ORF1ab/nsp31142F1142FttCttT44B.1.36.280.022989
ORF1ab/nsp31142F1142FttCttT44B.1.6210.000354
ORF1ab/nsp31142F1142FttCttT44C.310.071429
ORF1ab/nsp31142F1142FttCttT44N.90.02381
ORF1ab/nsp31142F1142FttCttT44P.1.170.000647
ORF1ab/nsp31142F1142FttCttT44Q.80.00066
ORF1ab/nsp31142F1142FttCttT33AY.1110.000549
ORF1ab/nsp31142F1142FttCttT33AY.160.001139
ORF1ab/nsp31142F1142FttCttT33AY.320.001597
ORF1ab/nsp31142F1142FttCttT33B0.000383
ORF1ab/nsp31142F1142FttCttT33B.1.1.330.001263
ORF1ab/nsp31142F1142FttCttT33B.1.177.370.081081
ORF1ab/nsp31142F1142FttCttT33B.1.3110.000824
ORF1ab/nsp31142F1142FttCttT33B.1.3620.004622
ORF1ab/nsp31142F1142FttCttT33B.1.4700.004213
ORF1ab/nsp31142F1142FttCttT33B.1.5960.000261
ORF1ab/nsp31142F1142FttCttT33B.1.6280.001057
ORF1ab/nsp31142F1142FttCttT33B.1.6370.000219
ORF1ab/nsp31142F1142FttCttT33P.20.00056
ORF1ab/nsp31142F1142FttCttT33Q.30.000435
ORF1ab/nsp31142F1142FttCttT22AU.20.004843
ORF1ab/nsp31142F1142FttCttT22AY.1050.001286
ORF1ab/nsp31142F1142FttCttT22AY.29.10.000441
ORF1ab/nsp31142F1142FttCttT22AY.4.50.000215
ORF1ab/nsp31142F1142FttCttT22AY.5.40.000553
ORF1ab/nsp31142F1142FttCttT22AY.610.00021
ORF1ab/nsp31142F1142FttCttT22AY.75.10.000361
ORF1ab/nsp31142F1142FttCttT22AY.920.000575
ORF1ab/nsp31142F1142FttCttT22AY.980.000158
ORF1ab/nsp31142F1142FttCttT22B.1.1.1210.004854
ORF1ab/nsp31142F1142FttCttT22B.1.1.2220.000408
ORF1ab/nsp31142F1142FttCttT22B.1.1.500.001358
ORF1ab/nsp31142F1142FttCttT22B.1.1.630.000772
ORF1ab/nsp31142F1142FttCttT22B.1.177.540.001213
ORF1ab/nsp31142F1142FttCttT22B.1.177.730.001133
ORF1ab/nsp31142F1142FttCttT22B.1.2210.000142
ORF1ab/nsp31142F1142FttCttT22B.1.3690.00057
ORF1ab/nsp31142F1142FttCttT22B.1.4560.006536
ORF1ab/nsp31142F1142FttCttT22B.1.5770.001375
ORF1ab/nsp31142F1142FttCttT22B.1.5820.000981
ORF1ab/nsp31142F1142FttCttT22B.1.5950.000522
ORF1ab/nsp31142F1142FttCttT22B.1.6230.001073
ORF1ab/nsp31142F1142FttCttT22B.1.910.004149
ORF1ab/nsp31142F1142FttCttT22C.370.000232
ORF1ab/nsp31142F1142FttCttT22P.70.008734
ORF1ab/nsp31142F1142FttCttT22Q.10.000253
ORF1ab/nsp31142F1142FttCttT110.055556
ORF1ab/nsp31142F1142FttCttT11A0.000387
ORF1ab/nsp31142F1142FttCttT11A.20.000662
ORF1ab/nsp31142F1142FttCttT11A.280.002646
ORF1ab/nsp31142F1142FttCttT11AD.20.000219
ORF1ab/nsp31142F1142FttCttT11AU.10.001266
ORF1ab/nsp31142F1142FttCttT11AY.1130.000142
ORF1ab/nsp31142F1142FttCttT11AY.1140.000231
ORF1ab/nsp31142F1142FttCttT11AY.1160.000287
ORF1ab/nsp31142F1142FttCttT11AY.120.2.10.000498
ORF1ab/nsp31142F1142FttCttT11AY.130.000161
ORF1ab/nsp31142F1142FttCttT11AY.140.000088
ORF1ab/nsp31142F1142FttCttT11AY.210.001898
ORF1ab/nsp31142F1142FttCttT11AY.240.000431
ORF1ab/nsp31142F1142FttCttT11AY.300.000396
ORF1ab/nsp31142F1142FttCttT11AY.310.018519
ORF1ab/nsp31142F1142FttCttT11AY.340.000097
ORF1ab/nsp31142F1142FttCttT11AY.34.10.00051
ORF1ab/nsp31142F1142FttCttT11AY.350.000233
ORF1ab/nsp31142F1142FttCttT11AY.360.000148
ORF1ab/nsp31142F1142FttCttT11AY.380.000499
ORF1ab/nsp31142F1142FttCttT11AY.39.1.10.000725
ORF1ab/nsp31142F1142FttCttT11AY.4.2.10.000149
ORF1ab/nsp31142F1142FttCttT11AY.400.000964
ORF1ab/nsp31142F1142FttCttT11AY.46.10.001027
ORF1ab/nsp31142F1142FttCttT11AY.46.30.000934
ORF1ab/nsp31142F1142FttCttT11AY.500.000799
ORF1ab/nsp31142F1142FttCttT11AY.570.000656
ORF1ab/nsp31142F1142FttCttT11AY.580.000907
ORF1ab/nsp31142F1142FttCttT11AY.630.000387
ORF1ab/nsp31142F1142FttCttT11AY.680.000274
ORF1ab/nsp31142F1142FttCttT11AY.690.000187
ORF1ab/nsp31142F1142FttCttT11AY.710.000475
ORF1ab/nsp31142F1142FttCttT11AY.770.001127
ORF1ab/nsp31142F1142FttCttT11AY.790.001211
ORF1ab/nsp31142F1142FttCttT11AY.9.20.000037
ORF1ab/nsp31142F1142FttCttT11AY.910.00073
ORF1ab/nsp31142F1142FttCttT11B.1.1.100.001115
ORF1ab/nsp31142F1142FttCttT11B.1.1.2310.003096
ORF1ab/nsp31142F1142FttCttT11B.1.1.2410.00207
ORF1ab/nsp31142F1142FttCttT11B.1.1.250.000569
ORF1ab/nsp31142F1142FttCttT11B.1.1.3010.001179
ORF1ab/nsp31142F1142FttCttT11B.1.1.3040.002809
ORF1ab/nsp31142F1142FttCttT11B.1.1.3170.000412
ORF1ab/nsp31142F1142FttCttT11B.1.1.3490.010309
ORF1ab/nsp31142F1142FttCttT11B.1.1.3720.000689
ORF1ab/nsp31142F1142FttCttT11B.1.1.3780.007299
ORF1ab/nsp31142F1142FttCttT11B.1.1.390.00051
ORF1ab/nsp31142F1142FttCttT11B.1.1.4160.000905
ORF1ab/nsp31142F1142FttCttT11B.1.1.50.008333
ORF1ab/nsp31142F1142FttCttT11B.1.1.540.003021
ORF1ab/nsp31142F1142FttCttT11B.1.1.830.00271
ORF1ab/nsp31142F1142FttCttT11B.1.1040.00369
ORF1ab/nsp31142F1142FttCttT11B.1.1100.004525
ORF1ab/nsp31142F1142FttCttT11B.1.110.30.000718
ORF1ab/nsp31142F1142FttCttT11B.1.1570.002985
ORF1ab/nsp31142F1142FttCttT11B.1.160.300.002976
ORF1ab/nsp31142F1142FttCttT11B.1.177.160.000664
ORF1ab/nsp31142F1142FttCttT11B.1.177.180.00116
ORF1ab/nsp31142F1142FttCttT11B.1.177.440.000519
ORF1ab/nsp31142F1142FttCttT11B.1.177.70.000165
ORF1ab/nsp31142F1142FttCttT11B.1.177.720.00339
ORF1ab/nsp31142F1142FttCttT11B.1.2290.009709
ORF1ab/nsp31142F1142FttCttT11B.1.2390.001221
ORF1ab/nsp31142F1142FttCttT11B.1.2400.000216
ORF1ab/nsp31142F1142FttCttT11B.1.258.170.000104
ORF1ab/nsp31142F1142FttCttT11B.1.258.40.003448
ORF1ab/nsp31142F1142FttCttT11B.1.2650.001271
ORF1ab/nsp31142F1142FttCttT11B.1.2980.002114
ORF1ab/nsp31142F1142FttCttT11B.1.3460.001311
ORF1ab/nsp31142F1142FttCttT11B.1.36.10.00114
ORF1ab/nsp31142F1142FttCttT11B.1.36.180.00042
ORF1ab/nsp31142F1142FttCttT11B.1.36.290.000517
ORF1ab/nsp31142F1142FttCttT11B.1.3770.004566
ORF1ab/nsp31142F1142FttCttT11B.1.390.003906
ORF1ab/nsp31142F1142FttCttT11B.1.4260.001009
ORF1ab/nsp31142F1142FttCttT11B.1.438.10.000107
ORF1ab/nsp31142F1142FttCttT11B.1.440.008333
ORF1ab/nsp31142F1142FttCttT11B.1.466.20.000391
ORF1ab/nsp31142F1142FttCttT11B.1.5170.000427
ORF1ab/nsp31142F1142FttCttT11B.1.5330.009615
ORF1ab/nsp31142F1142FttCttT11B.1.5410.004425
ORF1ab/nsp31142F1142FttCttT11B.1.5640.000426
ORF1ab/nsp31142F1142FttCttT11B.1.5710.009709
ORF1ab/nsp31142F1142FttCttT11B.1.930.000934
ORF1ab/nsp31142F1142FttCttT11C.10.002392
ORF1ab/nsp31142F1142FttCttT11C.36.30.000567
ORF1ab/nsp31142F1142FttCttT11C.400.027778
ORF1ab/nsp31142F1142FttCttT11N.10.016949
ORF1ab/nsp31142F1142FttCttT11P.1.100.000269
ORF1ab/nsp31142F1142FttCttT11P.1.120.000484
ORF1ab/nsp31142F1142FttCttT11P.1.160.000374
ORF1ab/nsp31142F1142FttCttT11P.1.20.001156
ORF1ab/nsp31142F1142FttCttT11P.1.90.004808
ORF1ab/nsp31142F1142FttCttT11P.30.001595
ORF1ab/nsp31142F1142FttCttT11Q.40.000455