CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1142 & Codon = Ctc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31142F1142LF1960LnonsynTtcCtc430410.09534886143-6145

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31142F1142LTtcCtc41430All0.000008
ORF1ab/nsp31142F1142LTtcCtc1275B.1.1.70.000001
ORF1ab/nsp31142F1142LTtcCtc1010AY.470.000311
ORF1ab/nsp31142F1142LTtcCtc59B.10.000046
ORF1ab/nsp31142F1142LTtcCtc59P.10.000079
ORF1ab/nsp31142F1142LTtcCtc23B.1.3510.000059
ORF1ab/nsp31142F1142LTtcCtc12AY.1030.000006
ORF1ab/nsp31142F1142LTtcCtc12AY.4.20.000022
ORF1ab/nsp31142F1142LTtcCtc12AY.430.000004
ORF1ab/nsp31142F1142LTtcCtc22B.1.1.630.000772
ORF1ab/nsp31142F1142LTtcCtc11AY.1200.000037
ORF1ab/nsp31142F1142LTtcCtc11AY.260.000028
ORF1ab/nsp31142F1142LTtcCtc11AY.40.000002
ORF1ab/nsp31142F1142LTtcCtc11AY.440.000006
ORF1ab/nsp31142F1142LTtcCtc11AY.460.000104
ORF1ab/nsp31142F1142LTtcCtc11AY.620.000436
ORF1ab/nsp31142F1142LTtcCtc11AY.680.000274
ORF1ab/nsp31142F1142LTtcCtc11AY.990.001049
ORF1ab/nsp31142F1142LTtcCtc11B.1.1770.000013
ORF1ab/nsp31142F1142LTtcCtc11B.1.177.860.000183
ORF1ab/nsp31142F1142LTtcCtc11B.1.4290.000024
ORF1ab/nsp31142F1142LTtcCtc11B.1.621.10.000506
ORF1ab/nsp31142F1142LTtcCtc11B.390.002331