CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp3 | 1142 | F1142F | F1960F | syn | ttC | ttT | 7041 | 7041 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142L | F1960L | nonsyn | ttC | ttA | 430 | 389 | 0.904651 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142L | F1960L | nonsyn | Ttc | Ctc | 430 | 41 | 0.0953488 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142del1 | F1960del1 | del | ttC | tt- | 84 | 84 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142C | F1960C | nonsyn | tTc | tGc | 51 | 51 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142del | F1960del | del | TTC | --- | 46 | 46 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142Y | F1960Y | nonsyn | tTc | tAc | 40 | 40 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142S | F1960S | nonsyn | tTc | tCc | 28 | 23 | 0.821429 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142S | F1960S | nonsyn | tTC | tCT | 28 | 5 | 0.178571 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142I | F1960I | nonsyn | Ttc | Atc | 3 | 3 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142A | F1960A | nonsyn | TTC | GCG | 3 | 1 | 0.333333 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142A | F1960A | nonsyn | TTC | GCT | 3 | 1 | 0.333333 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142A | F1960A | nonsyn | TTc | GCc | 3 | 1 | 0.333333 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142V | F1960V | nonsyn | Ttc | Gtc | 2 | 2 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142G | F1960G | nonsyn | TTC | GGA | 1 | 1 | 1 | 6143-6145 |
ORF1ab/nsp3 | 1142 | F1142P | F1960P | nonsyn | TTc | CCc | 1 | 1 | 1 | 6143-6145 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 7041 | 7041 | All | 0.001347 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1488 | 1488 | AY.6 | 0.061199 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1221 | 1221 | B.1.1.7 | 0.001093 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 890 | 890 | B.1.1.157 | 0.812785 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 389 | 430 | All | 0.000074 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 41 | 430 | All | 0.000008 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 401 | 401 | AY.25 | 0.002412 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 274 | 275 | B.1.1.7 | 0.000245 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 275 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 228 | 228 | B.1.617.2 | 0.000859 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 209 | 209 | AY.4 | 0.000325 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 205 | 205 | B.1.2 | 0.001805 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 185 | 185 | B.1.177.40 | 0.953608 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 142 | 142 | AY.103 | 0.000882 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 139 | 139 | AY.43 | 0.000616 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 122 | 122 | B.1.588 | 0.11101 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 117 | 117 | B.1 | 0.001072 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 100 | 100 | C.16 | 0.106045 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 91 | 91 | AY.44 | 0.000554 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 84 | 84 | All | 0.000016 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 83 | 83 | B.1.36 | 0.01211 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 69 | 69 | B.1.1.7 | 0.000062 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 61 | 61 | AY.33 | 0.004073 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 60 | 60 | AZ.2 | 0.049261 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 57 | 57 | P.1 | 0.000898 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 53 | 53 | AY.3 | 0.000527 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 52 | 52 | B.1.160 | 0.001622 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 51 | 51 | All | 0.00001 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 46 | 46 | All | 0.000009 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 44 | 44 | B.1.177 | 0.000579 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 40 | 40 | All | 0.000008 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 40 | 40 | AY.5 | 0.000826 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 38 | 38 | AY.121 | 0.005142 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 38 | 38 | B.1.1 | 0.000689 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 35 | 35 | AY.108 | 0.038589 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 35 | 35 | B.1.224 | 0.875 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 34 | 34 | B.1.427 | 0.001717 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 33 | 33 | AY.102 | 0.000875 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 32 | 32 | AY.120 | 0.00119 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 32 | 32 | AY.26 | 0.000906 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 30 | 30 | B.1.428.2 | 1 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 29 | 29 | AY.29 | 0.000457 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 23 | 28 | All | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142S | tTC | tCT | 5 | 28 | All | 0.000001 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 28 | 28 | B.1.258 | 0.001863 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 27 | 27 | AY.99.2 | 0.002488 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 27 | 27 | B.1.1.320 | 0.490909 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 26 | 26 | AY.10 | 0.013778 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 22 | 22 | AY.20 | 0.000855 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 20 | 20 | B.1.177.52 | 0.035149 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 20 | 20 | B.1.427 | 0.00101 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 20 | 20 | B.1.429 | 0.000471 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 19 | 19 | AY.100 | 0.000874 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 19 | 19 | AY.46.6 | 0.001372 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 18 | 18 | AY.23 | 0.001255 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 18 | 18 | B.1.1.519 | 0.000715 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 18 | 18 | B.1.128 | 0.011436 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 18 | 18 | P.1.14 | 0.00086 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 17 | 17 | B.1.1.7 | 0.000015 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 17 | 17 | B.1.526 | 0.0004 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 14 | 14 | AY.85 | 0.00598 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 14 | 14 | B.1.351 | 0.000416 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 13 | 13 | B.1.324 | 0.020867 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 13 | 13 | B.1.617.2 | 0.000049 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 12 | 12 | AY.39 | 0.000297 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 12 | 12 | B.1.617.2 | 0.000045 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 11 | 11 | AY.12 | 0.003477 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 11 | 11 | B.1.1.7 | 0.00001 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 10 | 10 | AY.45 | 0.001217 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 10 | 10 | AY.47 | 0.000311 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 10 | 10 | D.2 | 0.00075 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 9 | 9 | AY.4.2 | 0.000195 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 5 | 9 | B.1 | 0.000046 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 4 | 9 | B.1 | 0.000037 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 9 | 9 | B.1.1.214 | 0.000499 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 5 | 9 | P.1 | 0.000079 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 4 | 9 | P.1 | 0.000063 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 8 | 8 | A.2.5 | 0.003992 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 8 | 8 | AY.118 | 0.000501 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 8 | 8 | AY.42 | 0.000322 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 8 | 8 | AY.46.4 | 0.001316 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 8 | 8 | AY.5.3 | 0.002699 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 7 | 7 | AY.3 | 0.00007 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 7 | 7 | AY.75 | 0.000392 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 7 | 7 | AY.9.1 | 0.000586 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 7 | 7 | AY.98 | 0.000553 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 7 | 7 | B.1.177.57 | 0.001967 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 7 | 7 | P.1.15 | 0.001626 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 7 | 7 | Y.1 | 0.089744 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 6 | 6 | 0.333333 | |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 6 | 6 | AY.54 | 0.000572 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 6 | 6 | B.1.1.28 | 0.001867 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | AY.117 | 0.000423 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | AY.27 | 0.000324 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | AY.3.1 | 0.000426 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | AY.37 | 0.00158 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | AY.47 | 0.000156 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | AY.98.1 | 0.000242 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | B.1.1.306 | 0.002192 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | B.1.243 | 0.000348 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | B.1.617.1 | 0.000645 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 5 | 5 | P.1.7 | 0.001596 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | AY.106 | 0.00134 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | AY.55 | 0.00367 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | AY.67 | 0.001857 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | B.1.1.1 | 0.001307 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | B.1.177.86 | 0.000734 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | B.1.232 | 0.002149 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | B.1.351.2 | 0.00121 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | B.1.36.28 | 0.022989 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | B.1.621 | 0.000354 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | C.31 | 0.071429 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 4 | 4 | C.36.3 | 0.002269 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | N.9 | 0.02381 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | P.1.17 | 0.000647 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 4 | 4 | Q.4 | 0.001819 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 4 | 4 | Q.8 | 0.00066 |
ORF1ab/nsp3 | 1142 | F1142I | Ttc | Atc | 3 | 3 | All | 0.000001 |
ORF1ab/nsp3 | 1142 | F1142A | TTC | GCG | 1 | 3 | All | 0 |
ORF1ab/nsp3 | 1142 | F1142A | TTc | GCc | 1 | 3 | All | 0 |
ORF1ab/nsp3 | 1142 | F1142A | TTC | GCT | 1 | 3 | All | 0 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | AY.111 | 0.000549 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | AY.16 | 0.001139 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 3 | 3 | AY.25 | 0.000018 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | AY.32 | 0.001597 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B | 0.000383 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.1.33 | 0.001263 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.177.37 | 0.081081 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 3 | 3 | B.1.177.82 | 0.001432 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 3 | 3 | B.1.2 | 0.000026 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.311 | 0.000824 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 3 | 3 | B.1.351 | 0.000089 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 2 | 3 | B.1.351 | 0.000059 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 3 | B.1.351 | 0.00003 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.362 | 0.004622 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.470 | 0.004213 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.596 | 0.000261 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.628 | 0.001057 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | B.1.637 | 0.000219 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | P.2 | 0.00056 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 3 | 3 | Q.3 | 0.000435 |
ORF1ab/nsp3 | 1142 | F1142V | Ttc | Gtc | 2 | 2 | All | 0 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AU.2 | 0.004843 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 2 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 2 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.105 | 0.001286 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 2 | 2 | AY.25 | 0.000012 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.29.1 | 0.000441 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 2 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 2 | AY.4.2 | 0.000022 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 2 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142S | tTC | tCT | 1 | 2 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.5.4 | 0.000553 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 2 | 2 | AY.52 | 0.001629 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.75.1 | 0.000361 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.92 | 0.000575 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | AY.98 | 0.000158 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 2 | 2 | B | 0.000256 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 2 | 2 | B.1 | 0.000018 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.1.121 | 0.004854 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.1.50 | 0.001358 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 2 | 2 | B.1.1.523 | 0.003125 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.1.63 | 0.000772 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 2 | 2 | B.1.160 | 0.000062 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.177.54 | 0.001213 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 2 | 2 | B.1.177.73 | 0.001133 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.221 | 0.000142 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 2 | 2 | B.1.320 | 0.002491 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.369 | 0.00057 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.456 | 0.006536 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.577 | 0.001375 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.582 | 0.000981 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.595 | 0.000522 |
ORF1ab/nsp3 | 1142 | F1142S | tTC | tCT | 2 | 2 | B.1.617.2 | 0.000008 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.623 | 0.001073 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | B.1.91 | 0.004149 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 2 | 2 | C.37 | 0.000232 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | P.7 | 0.008734 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 2 | 2 | Q.1 | 0.000253 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | 0.055556 | |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | A | 0.000387 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | A.2 | 0.000662 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | A.28 | 0.002646 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | A.28 | 0.002646 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AD.2 | 0.000219 |
ORF1ab/nsp3 | 1142 | F1142P | TTc | CCc | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1142 | F1142G | TTC | GGA | 1 | 1 | All | 0 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AU.1 | 0.001266 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 1 | 1 | AY.103 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.120.2.1 | 0.000498 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.13 | 0.000161 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.24 | 0.000431 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 1 | 1 | AY.25 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.26 | 0.000028 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1142 | F1142V | Ttc | Gtc | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.30 | 0.000396 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.31 | 0.018519 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.33 | 0.000067 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.34.1 | 0.00051 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.35 | 0.000233 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.36 | 0.000148 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 1 | 1 | AY.39 | 0.000025 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.39.1.1 | 0.000725 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 1142 | F1142I | Ttc | Atc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.4 | 0.000002 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.4.2.1 | 0.000149 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.40 | 0.000964 |
ORF1ab/nsp3 | 1142 | F1142C | tTc | tGc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142V | Ttc | Gtc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.44 | 0.000006 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.46.1 | 0.001027 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.46.3 | 0.000934 |
ORF1ab/nsp3 | 1142 | F1142S | tTC | tCT | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.50 | 0.000799 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.54 | 0.000095 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.58 | 0.000907 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | AY.59 | 0.00053 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.61 | 0.000105 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.66 | 0.00107 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.69 | 0.000187 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.71 | 0.000475 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.77 | 0.001127 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.79 | 0.001211 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.9.2 | 0.000037 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | AY.91 | 0.00073 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 1 | 1 | AY.95 | 0.000761 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 1142 | F1142I | Ttc | Atc | 1 | 1 | AY.99 | 0.001049 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1142 | F1142A | TTc | GCc | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.10 | 0.001115 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.231 | 0.003096 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.241 | 0.00207 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.25 | 0.000569 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | B.1.1.294 | 0.001266 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.301 | 0.001179 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.304 | 0.002809 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp3 | 1142 | F1142I | Ttc | Atc | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.1.348 | 0.000796 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.349 | 0.010309 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.378 | 0.007299 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.39 | 0.00051 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.1.409 | 0.002833 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.416 | 0.000905 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.5 | 0.008333 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.54 | 0.003021 |
ORF1ab/nsp3 | 1142 | F1142Y | tTc | tAc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1142 | F1142A | TTC | GCG | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1142 | F1142G | TTC | GGA | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.1.83 | 0.00271 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.104 | 0.00369 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.110 | 0.004525 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.110.3 | 0.000718 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.157 | 0.002985 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.160 | 0.000031 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.160.30 | 0.002976 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | B.1.166 | 0.008475 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | B.1.177 | 0.000013 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.177.16 | 0.000664 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.177.18 | 0.00116 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.177.19 | 0.001431 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.177.44 | 0.000519 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 1 | 1 | B.1.177.6 | 0.000977 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.177.7 | 0.000165 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.177.72 | 0.00339 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1142 | F1142P | TTc | CCc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.229 | 0.009709 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.240 | 0.000216 |
ORF1ab/nsp3 | 1142 | F1142S | tTC | tCT | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | B.1.258 | 0.000067 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.258.17 | 0.000104 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.265 | 0.001271 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | B.1.351.2 | 0.000303 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.36.1 | 0.00114 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.36.18 | 0.00042 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.377 | 0.004566 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.39 | 0.003906 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | B.1.396 | 0.000706 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.426 | 0.001009 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | B.1.429 | 0.000024 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.438.1 | 0.000107 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.44 | 0.008333 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.466.2 | 0.000391 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.517 | 0.000427 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.526 | 0.000024 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.533 | 0.009615 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.541 | 0.004425 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | B.1.565 | 0.00081 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.571 | 0.009709 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp3 | 1142 | F1142A | TTC | GCT | 1 | 1 | B.1.617.2 | 0.000004 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | B.1.621.1 | 0.000506 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | B.1.93 | 0.000934 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | B.15 | 0.017544 |
ORF1ab/nsp3 | 1142 | F1142L | Ttc | Ctc | 1 | 1 | B.39 | 0.002331 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | C.36.3 | 0.000567 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | C.40 | 0.027778 |
ORF1ab/nsp3 | 1142 | F1142S | tTc | tCc | 1 | 1 | D.2 | 0.000075 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | N.1 | 0.016949 |
ORF1ab/nsp3 | 1142 | F1142del | TTC | --- | 1 | 1 | P.1 | 0.000016 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | P.1.10 | 0.000269 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | P.1.16 | 0.000374 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | P.1.9 | 0.004808 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | P.3 | 0.001595 |
ORF1ab/nsp3 | 1142 | F1142L | ttC | ttA | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp3 | 1142 | F1142F | ttC | ttT | 1 | 1 | Q.4 | 0.000455 |
ORF1ab/nsp3 | 1142 | F1142del1 | ttC | tt- | 1 | 1 | R.1 | 0.00009 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|