CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1103

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31103P1103QP1921QnonsyncCacAa11974119730.9999166026-6028
ORF1ab/nsp31103P1103QP1921QnonsyncCAcAG1197410.00008351436026-6028
ORF1ab/nsp31103P1103SP1921SnonsynCcaTca8603860316026-6028
ORF1ab/nsp31103P1103LP1921LnonsyncCacTa823182100.9974496026-6028
ORF1ab/nsp31103P1103LP1921LnonsynCCaTTa8231140.001700896026-6028
ORF1ab/nsp31103P1103LP1921LnonsyncCAcTG823130.0003644766026-6028
ORF1ab/nsp31103P1103LP1921LnonsynCCATTG823120.0002429846026-6028
ORF1ab/nsp31103P1103LP1921LnonsyncCAcTC823110.0001214926026-6028
ORF1ab/nsp31103P1103LP1921LnonsyncCAcTT823110.0001214926026-6028
ORF1ab/nsp31103P1103TP1921TnonsynCcaAca97297216026-6028
ORF1ab/nsp31103P1103PP1921PsynccAccG5123640.7109386026-6028
ORF1ab/nsp31103P1103PP1921PsynccAccC5121190.2324226026-6028
ORF1ab/nsp31103P1103PP1921PsynccAccT512290.05664066026-6028
ORF1ab/nsp31103P1103delP1921deldelCCA---939316026-6028
ORF1ab/nsp31103P1103AP1921AnonsynCcaGca414116026-6028
ORF1ab/nsp31103P1103RP1921RnonsyncCacGa23210.9130436026-6028
ORF1ab/nsp31103P1103RP1921RnonsyncCAcGT2310.04347836026-6028
ORF1ab/nsp31103P1103RP1921RnonsynCCaAGa2310.04347836026-6028
ORF1ab/nsp31103P1103del1P1921del1delccAcc-1360.4615386026-6028
ORF1ab/nsp31103P1103del1P1921del1delCca-ca1360.4615386026-6028
ORF1ab/nsp31103P1103del1P1921del1delcCAcT-1310.07692316026-6028
ORF1ab/nsp31103P1103KP1921KnonsynCCaAAa5516026-6028
ORF1ab/nsp31103P1103del2P1921del2delcCAc--4416026-6028
ORF1ab/nsp31103P1103IP1921InonsynCCaATa1116026-6028

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31103P1103QcCacAa1197311974All0.00229
ORF1ab/nsp31103P1103QcCAcAG111974All0
ORF1ab/nsp31103P1103SCcaTca86038603All0.001645
ORF1ab/nsp31103P1103LcCacTa82108231All0.00157
ORF1ab/nsp31103P1103LCCaTTa148231All0.000003
ORF1ab/nsp31103P1103LcCAcTG38231All0.000001
ORF1ab/nsp31103P1103LCCATTG28231All0
ORF1ab/nsp31103P1103LcCAcTT18231All0
ORF1ab/nsp31103P1103LcCAcTC18231All0
ORF1ab/nsp31103P1103QcCacAa55535554B.1.617.20.020909
ORF1ab/nsp31103P1103QcCAcAG15554B.1.617.20.000004
ORF1ab/nsp31103P1103QcCacAa41104110AY.350.957819
ORF1ab/nsp31103P1103SCcaTca15271527AY.40.002377
ORF1ab/nsp31103P1103SCcaTca14361436B.1.1.70.001286
ORF1ab/nsp31103P1103SCcaTca12341234AY.260.034935
ORF1ab/nsp31103P1103LcCacTa11961198B.1.1.70.001071
ORF1ab/nsp31103P1103LCCaTTa21198B.1.1.70.000002
ORF1ab/nsp31103P1103LcCacTa992992B.1.2430.069028
ORF1ab/nsp31103P1103TCcaAca972972All0.000186
ORF1ab/nsp31103P1103TCcaAca922922AY.430.004085
ORF1ab/nsp31103P1103LcCacTa802803AY.430.003553
ORF1ab/nsp31103P1103LCCaTTa1803AY.430.000004
ORF1ab/nsp31103P1103LcCacTa609609AY.40.000948
ORF1ab/nsp31103P1103PccAccG364512All0.00007
ORF1ab/nsp31103P1103PccAccC119512All0.000023
ORF1ab/nsp31103P1103PccAccT29512All0.000006
ORF1ab/nsp31103P1103SCcaTca396396AY.250.002382
ORF1ab/nsp31103P1103SCcaTca387387B.1.5260.009096
ORF1ab/nsp31103P1103QcCacAa373373AY.250.002244
ORF1ab/nsp31103P1103SCcaTca361361AY.430.001599
ORF1ab/nsp31103P1103SCcaTca285285B.1.4970.089707
ORF1ab/nsp31103P1103LcCacTa272272AY.420.010943
ORF1ab/nsp31103P1103LcCacTa265265AY.60.010899
ORF1ab/nsp31103P1103LcCacTa258260B.1.617.20.000971
ORF1ab/nsp31103P1103LcCAcTC1260B.1.617.20.000004
ORF1ab/nsp31103P1103LcCAcTG1260B.1.617.20.000004
ORF1ab/nsp31103P1103QcCacAa252252AY.16.10.118421
ORF1ab/nsp31103P1103LcCacTa252252B.1.177.770.183007
ORF1ab/nsp31103P1103QcCacAa231231AY.480.107442
ORF1ab/nsp31103P1103LcCacTa223224B.10.002043
ORF1ab/nsp31103P1103LcCAcTT1224B.10.000009
ORF1ab/nsp31103P1103LcCacTa191191B.1.20.001682
ORF1ab/nsp31103P1103QcCacAa185185AY.290.002918
ORF1ab/nsp31103P1103LcCacTa180180B.1.1770.00237
ORF1ab/nsp31103P1103QcCacAa178178AY.440.001083
ORF1ab/nsp31103P1103PccAccG174174B.1.1.3180.052505
ORF1ab/nsp31103P1103LcCacTa169169AY.260.004784
ORF1ab/nsp31103P1103SCcaTca154154B.1.177.90.20506
ORF1ab/nsp31103P1103SCcaTca151151B.1.617.20.000569
ORF1ab/nsp31103P1103SCcaTca150150B.1.10.002721
ORF1ab/nsp31103P1103QcCacAa148148B.1.1.1700.184539
ORF1ab/nsp31103P1103LcCacTa148148B.1.2210.010513
ORF1ab/nsp31103P1103SCcaTca145145AY.390.003583
ORF1ab/nsp31103P1103QcCacAa141141AY.230.009835
ORF1ab/nsp31103P1103LcCacTa129129B.1.5250.014598
ORF1ab/nsp31103P1103QcCacAa116116AY.130.018674
ORF1ab/nsp31103P1103SCcaTca115115B.1.1600.003587
ORF1ab/nsp31103P1103LcCacTa114114AY.30.001134
ORF1ab/nsp31103P1103SCcaTca113113B.1.1770.001488
ORF1ab/nsp31103P1103PccAccC88110B.1.617.20.000331
ORF1ab/nsp31103P1103PccAccG20110B.1.617.20.000075
ORF1ab/nsp31103P1103PccAccT2110B.1.617.20.000008
ORF1ab/nsp31103P1103LcCacTa102102AY.340.00989
ORF1ab/nsp31103P1103SCcaTca9696B.10.000879
ORF1ab/nsp31103P1103SCcaTca9595P.10.001497
ORF1ab/nsp31103P1103LcCacTa9494B.1.2370.467662
ORF1ab/nsp31103P1103delCCA---9393All0.000018
ORF1ab/nsp31103P1103SCcaTca9292B.1.20.00081
ORF1ab/nsp31103P1103SCcaTca9191AY.1030.000565
ORF1ab/nsp31103P1103SCcaTca9191B.1.595.40.664234
ORF1ab/nsp31103P1103LcCacTa8888P.1.140.004207
ORF1ab/nsp31103P1103LcCacTa8585AY.1030.000528
ORF1ab/nsp31103P1103LcCacTa8585AY.440.000517
ORF1ab/nsp31103P1103LcCacTa8484AY.250.000505
ORF1ab/nsp31103P1103LcCacTa8181AY.1010.039725
ORF1ab/nsp31103P1103LcCacTa7979B.1.4270.003989
ORF1ab/nsp31103P1103QcCacAa7272AY.1080.079383
ORF1ab/nsp31103P1103SCcaTca6767AY.440.000408
ORF1ab/nsp31103P1103SCcaTca6767AY.50.001383
ORF1ab/nsp31103P1103SCcaTca6161B.1.1.5190.002422
ORF1ab/nsp31103P1103LcCacTa6161P.10.000961
ORF1ab/nsp31103P1103PccAccG6060AY.1030.000373
ORF1ab/nsp31103P1103LcCacTa5959B0.007541
ORF1ab/nsp31103P1103SCcaTca5656B.1.5950.014614
ORF1ab/nsp31103P1103LcCacTa5555B.1.1.5190.002184
ORF1ab/nsp31103P1103PccAccG5555B.1.6280.01938
ORF1ab/nsp31103P1103LcCacTa5454B.1.2340.007125
ORF1ab/nsp31103P1103LcCacTa5353B.1.360.007733
ORF1ab/nsp31103P1103SCcaTca5353B.1.360.007733
ORF1ab/nsp31103P1103SCcaTca5151B.1.1.700.017394
ORF1ab/nsp31103P1103LcCacTa5050AY.160.018983
ORF1ab/nsp31103P1103LcCacTa4949AY.1170.004141
ORF1ab/nsp31103P1103LcCacTa4949AY.390.001211
ORF1ab/nsp31103P1103SCcaTca4747AY.30.000467
ORF1ab/nsp31103P1103LcCacTa4647B.1.10.000834
ORF1ab/nsp31103P1103LCCaTTa147B.1.10.000018
ORF1ab/nsp31103P1103SCcaTca4646B.1.1.3260.080986
ORF1ab/nsp31103P1103QcCacAa4646B.1.1770.000606
ORF1ab/nsp31103P1103QcCacAa4444AY.30.000438
ORF1ab/nsp31103P1103SCcaTca4343AY.4.20.000933
ORF1ab/nsp31103P1103ACcaGca4141All0.000008
ORF1ab/nsp31103P1103QcCacAa4040AY.660.042781
ORF1ab/nsp31103P1103LcCacTa3939B.1.1.3260.068662
ORF1ab/nsp31103P1103LcCacTa3838AY.1080.041896
ORF1ab/nsp31103P1103SCcaTca3838B.1.1.2890.079167
ORF1ab/nsp31103P1103delCCA---3838B.1.1.70.000034
ORF1ab/nsp31103P1103LcCacTa3636AY.1130.005126
ORF1ab/nsp31103P1103SCcaTca3636AY.270.00233
ORF1ab/nsp31103P1103SCcaTca3636AY.800.040632
ORF1ab/nsp31103P1103SCcaTca3535B.1.1.3690.015618
ORF1ab/nsp31103P1103LcCacTa3535B.1.1600.001092
ORF1ab/nsp31103P1103SCcaTca3535B.1.4290.000824
ORF1ab/nsp31103P1103LcCacTa3434AY.750.001905
ORF1ab/nsp31103P1103QcCacAa3333B.1.1.70.00003
ORF1ab/nsp31103P1103LcCacTa3131B.1.1.3770.042818
ORF1ab/nsp31103P1103SCcaTca3030AY.1020.000795
ORF1ab/nsp31103P1103QcCacAa3030AY.190.034208
ORF1ab/nsp31103P1103LcCacTa2727AY.290.000426
ORF1ab/nsp31103P1103QcCacAa2727AY.40.000042
ORF1ab/nsp31103P1103QcCacAa2626B.10.000238
ORF1ab/nsp31103P1103LcCacTa2626B.1.4290.000612
ORF1ab/nsp31103P1103QcCacAa2525C.370.002902
ORF1ab/nsp31103P1103SCcaTca2424C.370.002786
ORF1ab/nsp31103P1103RcCacGa2123All0.000004
ORF1ab/nsp31103P1103RCCaAGa123All0
ORF1ab/nsp31103P1103RcCAcGT123All0
ORF1ab/nsp31103P1103SCcaTca2323AY.470.000715
ORF1ab/nsp31103P1103LcCacTa2323B.1.1990.095041
ORF1ab/nsp31103P1103LcCacTa2323B.1.5760.020852
ORF1ab/nsp31103P1103SCcaTca2222AY.200.000855
ORF1ab/nsp31103P1103SCcaTca2222B.1.1.4640.032401
ORF1ab/nsp31103P1103LcCacTa2222B.1.177.320.02969
ORF1ab/nsp31103P1103LcCacTa2222B.1.177.600.004806
ORF1ab/nsp31103P1103SCcaTca2222B.1.3510.000654
ORF1ab/nsp31103P1103LcCacTa2121AY.200.000816
ORF1ab/nsp31103P1103QcCacAa2020AY.5.40.005534
ORF1ab/nsp31103P1103SCcaTca2020B.1.160.140.042373
ORF1ab/nsp31103P1103LcCacTa2020C.370.002321
ORF1ab/nsp31103P1103LcCacTa1919AY.1070.008854
ORF1ab/nsp31103P1103LcCacTa1919AY.1180.00119
ORF1ab/nsp31103P1103SCcaTca1919AY.450.002312
ORF1ab/nsp31103P1103LcCacTa1919AY.50.000392
ORF1ab/nsp31103P1103LcCacTa1919B.1.3510.000565
ORF1ab/nsp31103P1103LcCacTa1919B.1.5650.015397
ORF1ab/nsp31103P1103QcCacAa1818AY.1160.005162
ORF1ab/nsp31103P1103LcCacTa1818B.1.1.2770.013657
ORF1ab/nsp31103P1103SCcaTca1818B.1.2210.001279
ORF1ab/nsp31103P1103SCcaTca1818B.1.466.20.007042
ORF1ab/nsp31103P1103LcCacTa1717B.1.2580.001131
ORF1ab/nsp31103P1103SCcaTca1717B.1.5540.07489
ORF1ab/nsp31103P1103LcCacTa1717B.1.5800.069106
ORF1ab/nsp31103P1103LcCacTa1616AY.20.005698
ORF1ab/nsp31103P1103LcCacTa1616AY.270.001036
ORF1ab/nsp31103P1103LcCacTa1616AY.450.001947
ORF1ab/nsp31103P1103QcCacAa1616AY.680.00438
ORF1ab/nsp31103P1103SCcaTca1616B.1.1.3480.012739
ORF1ab/nsp31103P1103SCcaTca1515AY.750.00084
ORF1ab/nsp31103P1103SCcaTca1515B.1.177.600.003277
ORF1ab/nsp31103P1103SCcaTca1515B.1.2430.001044
ORF1ab/nsp31103P1103SCcaTca1414AY.1000.000644
ORF1ab/nsp31103P1103QcCacAa1414AY.1030.000087
ORF1ab/nsp31103P1103QcCacAa1414AY.520.011401
ORF1ab/nsp31103P1103PccAccG514B.1.1.70.000004
ORF1ab/nsp31103P1103PccAccT514B.1.1.70.000004
ORF1ab/nsp31103P1103PccAccC414B.1.1.70.000004
ORF1ab/nsp31103P1103LcCacTa1414B.1.5170.005978
ORF1ab/nsp31103P1103SCcaTca1414C.36.30.007941
ORF1ab/nsp31103P1103SCcaTca1414P.1.70.00447
ORF1ab/nsp31103P1103del1Cca-ca613All0.000001
ORF1ab/nsp31103P1103del1ccAcc-613All0.000001
ORF1ab/nsp31103P1103del1cCAcT-113All0
ORF1ab/nsp31103P1103LcCacTa1313AY.1020.000345
ORF1ab/nsp31103P1103QcCacAa1313AY.430.000058
ORF1ab/nsp31103P1103SCcaTca1313AY.460.001353
ORF1ab/nsp31103P1103SCcaTca1313B.1.1.2220.002652
ORF1ab/nsp31103P1103LcCacTa1313B.1.1.2840.001396
ORF1ab/nsp31103P1103SCcaTca1313B.1.1.3880.590909
ORF1ab/nsp31103P1103TCcaAca1313B.1.1.70.000012
ORF1ab/nsp31103P1103LcCacTa1313B.1.6370.00095
ORF1ab/nsp31103P1103SCcaTca1313P.1.170.002103
ORF1ab/nsp31103P1103SCcaTca1313Q.80.002144
ORF1ab/nsp31103P1103LcCacTa1212AY.1190.000424
ORF1ab/nsp31103P1103LcCacTa1212B.1.1.3060.005261
ORF1ab/nsp31103P1103SCcaTca1212B.1.5250.001358
ORF1ab/nsp31103P1103ACcaGca1212B.1.5260.000282
ORF1ab/nsp31103P1103LcCacTa1212B.1.5960.001046
ORF1ab/nsp31103P1103SCcaTca1111AY.1050.007074
ORF1ab/nsp31103P1103SCcaTca1111AY.130.001771
ORF1ab/nsp31103P1103SCcaTca1111AY.410.003233
ORF1ab/nsp31103P1103QcCacAa1111AY.470.000342
ORF1ab/nsp31103P1103LcCacTa1111B.1.1.2890.022917
ORF1ab/nsp31103P1103ACcaGca1111B.1.617.20.000041
ORF1ab/nsp31103P1103SCcaTca1010AY.1130.001424
ORF1ab/nsp31103P1103SCcaTca1010AY.1170.000845
ORF1ab/nsp31103P1103SCcaTca1010AY.290.000158
ORF1ab/nsp31103P1103SCcaTca1010AY.420.000402
ORF1ab/nsp31103P1103LcCacTa1010AY.540.000953
ORF1ab/nsp31103P1103QcCacAa1010AY.540.000953
ORF1ab/nsp31103P1103LcCacTa1010AY.650.00533
ORF1ab/nsp31103P1103LcCacTa1010AY.880.008842
ORF1ab/nsp31103P1103SCcaTca1010B.1.1.2910.007424
ORF1ab/nsp31103P1103LcCacTa1010B.1.1.3180.003018
ORF1ab/nsp31103P1103SCcaTca1010B.1.1.390.005097
ORF1ab/nsp31103P1103LcCacTa1010B.1.1260.012755
ORF1ab/nsp31103P1103LCCaTTa1010B.1.4970.003148
ORF1ab/nsp31103P1103LcCacTa99AY.1200.000335
ORF1ab/nsp31103P1103QcCacAa99AY.240.003879
ORF1ab/nsp31103P1103QcCacAa99AY.330.000601
ORF1ab/nsp31103P1103PccAccT49AY.40.000006
ORF1ab/nsp31103P1103PccAccG49AY.40.000006
ORF1ab/nsp31103P1103PccAccC19AY.40.000002
ORF1ab/nsp31103P1103LcCacTa99AY.46.60.00065
ORF1ab/nsp31103P1103QcCacAa99AY.610.000943
ORF1ab/nsp31103P1103QcCacAa99AY.750.000504
ORF1ab/nsp31103P1103LcCacTa99B.1.1.280.002801
ORF1ab/nsp31103P1103LcCacTa99B.1.36.290.004656
ORF1ab/nsp31103P1103LcCacTa99B.1.5870.017078
ORF1ab/nsp31103P1103LcCacTa99P.20.00168
ORF1ab/nsp31103P1103LcCacTa99Q.70.01
ORF1ab/nsp31103P1103QcCacAa88AY.1180.000501
ORF1ab/nsp31103P1103LcCacTa88AY.230.000558
ORF1ab/nsp31103P1103SCcaTca88AY.330.000534
ORF1ab/nsp31103P1103SCcaTca88AY.4.50.00086
ORF1ab/nsp31103P1103PccAccG88AY.440.000049
ORF1ab/nsp31103P1103PccAccC88AY.46.50.001587
ORF1ab/nsp31103P1103QcCacAa88AY.620.003486
ORF1ab/nsp31103P1103SCcaTca88AY.630.003095
ORF1ab/nsp31103P1103SCcaTca88AY.690.001493
ORF1ab/nsp31103P1103QcCacAa88AY.98.10.000387
ORF1ab/nsp31103P1103SCcaTca88B0.001022
ORF1ab/nsp31103P1103LcCacTa88B.1.1.2200.01487
ORF1ab/nsp31103P1103QcCacAa88B.1.220.01054
ORF1ab/nsp31103P1103SCcaTca88B.1.2340.001056
ORF1ab/nsp31103P1103SCcaTca88B.1.2580.000532
ORF1ab/nsp31103P1103LcCacTa77AY.330.000467
ORF1ab/nsp31103P1103LcCacTa77AY.360.001037
ORF1ab/nsp31103P1103QcCacAa77AY.50.000145
ORF1ab/nsp31103P1103SCcaTca77AY.850.00299
ORF1ab/nsp31103P1103SCcaTca77B.1.177.810.001325
ORF1ab/nsp31103P1103LcCacTa77B.1.2400.001509
ORF1ab/nsp31103P1103LcCacTa77B.1.2420.132075
ORF1ab/nsp31103P1103LcCacTa77B.1.36.170.003458
ORF1ab/nsp31103P1103SCcaTca77B.1.6210.00062
ORF1ab/nsp31103P1103LcCacTa77B.1.6210.00062
ORF1ab/nsp31103P1103LcCacTa77B.1.9.40.042945
ORF1ab/nsp31103P1103SCcaTca77N.50.012367
ORF1ab/nsp31103P1103LcCacTa77P.1.150.001626
ORF1ab/nsp31103P1103LcCacTa77Q.10.000884
ORF1ab/nsp31103P1103SCcaTca77Z.10.020231
ORF1ab/nsp31103P1103QcCacAa66AY.1170.000507
ORF1ab/nsp31103P1103LcCacTa66AY.1210.000812
ORF1ab/nsp31103P1103LcCacTa66AY.140.000528
ORF1ab/nsp31103P1103SCcaTca66AY.300.002374
ORF1ab/nsp31103P1103QcCacAa66AY.390.000148
ORF1ab/nsp31103P1103PccAccT36AY.430.000013
ORF1ab/nsp31103P1103PccAccC36AY.430.000013
ORF1ab/nsp31103P1103QcCacAa66AY.450.00073
ORF1ab/nsp31103P1103LcCacTa66AY.470.000187
ORF1ab/nsp31103P1103SCcaTca66AY.700.001251
ORF1ab/nsp31103P1103QcCacAa66AY.770.006764
ORF1ab/nsp31103P1103SCcaTca66AY.98.10.000291
ORF1ab/nsp31103P1103LcCacTa66B.1.1.2140.000333
ORF1ab/nsp31103P1103SCcaTca66B.1.1.250.003411
ORF1ab/nsp31103P1103SCcaTca66B.1.1.280.001867
ORF1ab/nsp31103P1103SCcaTca66B.1.1.2840.000644
ORF1ab/nsp31103P1103QcCacAa66B.1.1.3680.018519
ORF1ab/nsp31103P1103ACcaGca66B.1.1.70.000005
ORF1ab/nsp31103P1103PccAccG46B.1.1770.000053
ORF1ab/nsp31103P1103PccAccT26B.1.1770.000026
ORF1ab/nsp31103P1103SCcaTca66B.1.177.210.000459
ORF1ab/nsp31103P1103LcCacTa66B.1.4160.007614
ORF1ab/nsp31103P1103LcCacTa66B.1.4530.019417
ORF1ab/nsp31103P1103SCcaTca66B.1.5960.000523
ORF1ab/nsp31103P1103SCcaTca66B.1.5990.021898
ORF1ab/nsp31103P1103SCcaTca66B.1.6090.002876
ORF1ab/nsp31103P1103SCcaTca66B.1.6370.000438
ORF1ab/nsp31103P1103LcCacTa66Q.80.000989
ORF1ab/nsp31103P1103SCcaTca66R.10.00054
ORF1ab/nsp31103P1103SCcaTca55A0.001935
ORF1ab/nsp31103P1103LcCacTa55A.270.008278
ORF1ab/nsp31103P1103LcCacTa55A.280.013228
ORF1ab/nsp31103P1103KCCaAAa55All0.000001
ORF1ab/nsp31103P1103SCcaTca55AY.1100.000563
ORF1ab/nsp31103P1103SCcaTca55AY.1190.000177
ORF1ab/nsp31103P1103PccAccG55AY.250.00003
ORF1ab/nsp31103P1103SCcaTca55AY.3.10.000426
ORF1ab/nsp31103P1103LcCacTa55AY.39.10.000198
ORF1ab/nsp31103P1103SCcaTca55AY.39.10.000198
ORF1ab/nsp31103P1103TCcaAca55AY.40.000008
ORF1ab/nsp31103P1103QcCacAa55AY.550.004587
ORF1ab/nsp31103P1103SCcaTca55AY.60.000206
ORF1ab/nsp31103P1103LcCacTa55AY.610.000524
ORF1ab/nsp31103P1103LcCacTa55AY.620.002179
ORF1ab/nsp31103P1103SCcaTca55AY.7.20.002796
ORF1ab/nsp31103P1103SCcaTca55AY.90.000338
ORF1ab/nsp31103P1103PccAccG35B.10.000027
ORF1ab/nsp31103P1103PccAccC15B.10.000009
ORF1ab/nsp31103P1103PccAccT15B.10.000009
ORF1ab/nsp31103P1103LcCacTa55B.1.1.2220.00102
ORF1ab/nsp31103P1103QcCacAa55B.1.20.000044
ORF1ab/nsp31103P1103SCcaTca55B.1.2410.004058
ORF1ab/nsp31103P1103SCcaTca55B.1.258.170.00052
ORF1ab/nsp31103P1103LcCacTa55B.1.3490.003574
ORF1ab/nsp31103P1103LcCacTa55B.1.3980.014881
ORF1ab/nsp31103P1103SCcaTca55B.1.4270.000252
ORF1ab/nsp31103P1103QcCacAa55B.1.4700.007022
ORF1ab/nsp31103P1103LcCacTa55B.1.5260.000118
ORF1ab/nsp31103P1103SCcaTca55B.1.5750.001517
ORF1ab/nsp31103P1103LcCacTa55B.1.617.10.000645
ORF1ab/nsp31103P1103TCcaAca55B.1.617.20.000019
ORF1ab/nsp31103P1103SCcaTca55B.400.001821
ORF1ab/nsp31103P1103SCcaTca55P.1.100.001347
ORF1ab/nsp31103P1103SCcaTca55P.1.140.000239
ORF1ab/nsp31103P1103LcCacTa55P.1.40.004883
ORF1ab/nsp31103P1103LCCATTG240.111111
ORF1ab/nsp31103P1103LcCAcTG240.111111
ORF1ab/nsp31103P1103del2cCAc--44All0.000001
ORF1ab/nsp31103P1103QcCacAa44AY.1000.000184
ORF1ab/nsp31103P1103SCcaTca44AY.1110.000733
ORF1ab/nsp31103P1103SCcaTca44AY.116.10.001246
ORF1ab/nsp31103P1103SCcaTca44AY.230.000279
ORF1ab/nsp31103P1103QcCacAa44AY.360.000593
ORF1ab/nsp31103P1103SCcaTca44AY.360.000593
ORF1ab/nsp31103P1103LcCacTa44AY.410.001176
ORF1ab/nsp31103P1103LcCacTa44AY.460.000416
ORF1ab/nsp31103P1103LcCacTa44AY.740.000463
ORF1ab/nsp31103P1103SCcaTca44AY.75.10.000721
ORF1ab/nsp31103P1103QcCacAa44AY.870.003331
ORF1ab/nsp31103P1103QcCacAa44AY.880.003537
ORF1ab/nsp31103P1103SCcaTca44AY.9.20.000147
ORF1ab/nsp31103P1103QcCacAa44AY.9.20.000147
ORF1ab/nsp31103P1103LcCacTa44AY.980.000316
ORF1ab/nsp31103P1103delCCA---44B.1.10.000073
ORF1ab/nsp31103P1103LcCacTa44B.1.1.330.001684
ORF1ab/nsp31103P1103SCcaTca44B.1.1.3520.125
ORF1ab/nsp31103P1103LcCacTa44B.1.177.440.002076
ORF1ab/nsp31103P1103LcCacTa44B.1.177.70.000659
ORF1ab/nsp31103P1103LcCacTa44B.1.3110.001098
ORF1ab/nsp31103P1103SCcaTca44B.1.36.380.006568
ORF1ab/nsp31103P1103TCcaAca44B.1.3690.001141
ORF1ab/nsp31103P1103delCCA---44B.1.617.20.000015
ORF1ab/nsp31103P1103SCcaTca44D.20.0003
ORF1ab/nsp31103P1103SCcaTca44P.1.120.001936
ORF1ab/nsp31103P1103SCcaTca44P.20.000747
ORF1ab/nsp31103P1103SCcaTca33AY.100.00159
ORF1ab/nsp31103P1103QcCacAa33AY.1020.00008
ORF1ab/nsp31103P1103LcCacTa33AY.1050.001929
ORF1ab/nsp31103P1103LcCacTa33AY.1060.001005
ORF1ab/nsp31103P1103SCcaTca33AY.1160.00086
ORF1ab/nsp31103P1103SCcaTca33AY.1180.000188
ORF1ab/nsp31103P1103TCcaAca33AY.1190.000106
ORF1ab/nsp31103P1103SCcaTca33AY.120.10.000963
ORF1ab/nsp31103P1103QcCacAa33AY.220.006276
ORF1ab/nsp31103P1103delCCA---33AY.250.000018
ORF1ab/nsp31103P1103PccAccT33AY.30.00003
ORF1ab/nsp31103P1103LcCacTa33AY.3.10.000256
ORF1ab/nsp31103P1103LcCacTa33AY.4.20.000065
ORF1ab/nsp31103P1103QcCacAa33AY.4.20.000065
ORF1ab/nsp31103P1103LcCacTa33AY.46.40.000494
ORF1ab/nsp31103P1103SCcaTca33AY.540.000286
ORF1ab/nsp31103P1103SCcaTca33AY.590.001589
ORF1ab/nsp31103P1103QcCacAa33AY.60.000123
ORF1ab/nsp31103P1103SCcaTca33AY.610.000314
ORF1ab/nsp31103P1103SCcaTca33AY.680.000821
ORF1ab/nsp31103P1103LcCacTa33AY.75.10.000541
ORF1ab/nsp31103P1103LcCacTa33AY.90.000203
ORF1ab/nsp31103P1103LcCacTa33AY.9.10.000251
ORF1ab/nsp31103P1103QcCacAa33AY.920.000862
ORF1ab/nsp31103P1103QcCacAa33AY.980.000237
ORF1ab/nsp31103P1103SCcaTca33AY.99.20.000276
ORF1ab/nsp31103P1103SCcaTca33AZ.50.010526
ORF1ab/nsp31103P1103delCCA---33B.10.000027
ORF1ab/nsp31103P1103QcCacAa33B.1.10.000054
ORF1ab/nsp31103P1103SCcaTca33B.1.1.1860.010309
ORF1ab/nsp31103P1103SCcaTca33B.1.1.1920.006928
ORF1ab/nsp31103P1103SCcaTca33B.1.1.2070.003546
ORF1ab/nsp31103P1103QcCacAa33B.1.1.2140.000166
ORF1ab/nsp31103P1103LcCacTa33B.1.1.2410.006211
ORF1ab/nsp31103P1103SCcaTca33B.1.1.3160.002775
ORF1ab/nsp31103P1103SCcaTca33B.1.1.3170.001235
ORF1ab/nsp31103P1103LcCacTa33B.1.1.3720.002066
ORF1ab/nsp31103P1103LcCacTa33B.1.1.4340.001046
ORF1ab/nsp31103P1103SCcaTca33B.1.1.830.00813
ORF1ab/nsp31103P1103PccAccG33B.1.177.150.001893
ORF1ab/nsp31103P1103LcCacTa33B.1.177.570.000843
ORF1ab/nsp31103P1103SCcaTca33B.1.177.770.002179
ORF1ab/nsp31103P1103LcCacTa33B.1.177.810.000568
ORF1ab/nsp31103P1103LcCacTa33B.1.177.860.00055
ORF1ab/nsp31103P1103SCcaTca33B.1.2060.002447
ORF1ab/nsp31103P1103delCCA---33B.1.2580.0002
ORF1ab/nsp31103P1103RcCacGa33B.1.36.290.001552
ORF1ab/nsp31103P1103SCcaTca33B.1.4160.003807
ORF1ab/nsp31103P1103RcCacGa33B.1.4290.000071
ORF1ab/nsp31103P1103QcCacAa33B.1.4800.007463
ORF1ab/nsp31103P1103LcCacTa33B.1.5090.002597
ORF1ab/nsp31103P1103SCcaTca33B.1.5820.001472
ORF1ab/nsp31103P1103LcCacTa33B.1.5950.000783
ORF1ab/nsp31103P1103LcCacTa33B.1.6000.017544
ORF1ab/nsp31103P1103KCCaAAa33B.1.617.20.000011
ORF1ab/nsp31103P1103QcCacAa33B.30.002492
ORF1ab/nsp31103P1103LcCacTa33C.160.003181
ORF1ab/nsp31103P1103LcCacTa33R.10.00027
ORF1ab/nsp31103P1103PccAccC220.111111
ORF1ab/nsp31103P1103ACcaGca22AY.10.000791
ORF1ab/nsp31103P1103SCcaTca22AY.10.000791
ORF1ab/nsp31103P1103LcCacTa22AY.1000.000092
ORF1ab/nsp31103P1103PccAccG22AY.1020.000053
ORF1ab/nsp31103P1103QcCacAa22AY.1060.00067
ORF1ab/nsp31103P1103LcCacTa22AY.1100.000225
ORF1ab/nsp31103P1103LcCacTa22AY.1110.000366
ORF1ab/nsp31103P1103QcCacAa22AY.1200.000074
ORF1ab/nsp31103P1103SCcaTca22AY.1200.000074
ORF1ab/nsp31103P1103PccAccG22AY.1200.000074
ORF1ab/nsp31103P1103LcCacTa22AY.16.10.00094
ORF1ab/nsp31103P1103SCcaTca22AY.23.10.000835
ORF1ab/nsp31103P1103TCcaAca22AY.260.000057
ORF1ab/nsp31103P1103QcCacAa22AY.260.000057
ORF1ab/nsp31103P1103QcCacAa22AY.370.000632
ORF1ab/nsp31103P1103LcCacTa22AY.380.000999
ORF1ab/nsp31103P1103SCcaTca22AY.4.2.10.000298
ORF1ab/nsp31103P1103delCCA---22AY.4.50.000215
ORF1ab/nsp31103P1103PccAccC22AY.4.50.000215
ORF1ab/nsp31103P1103QcCacAa22AY.400.001929
ORF1ab/nsp31103P1103delCCA---22AY.430.000009
ORF1ab/nsp31103P1103TCcaAca22AY.440.000012
ORF1ab/nsp31103P1103delCCA---22AY.440.000012
ORF1ab/nsp31103P1103TCcaAca22AY.450.000243
ORF1ab/nsp31103P1103QcCacAa22AY.460.000208
ORF1ab/nsp31103P1103SCcaTca22AY.46.40.000329
ORF1ab/nsp31103P1103SCcaTca22AY.46.50.000397
ORF1ab/nsp31103P1103SCcaTca22AY.46.60.000144
ORF1ab/nsp31103P1103PccAccC22AY.470.000062
ORF1ab/nsp31103P1103SCcaTca22AY.5.40.000553
ORF1ab/nsp31103P1103SCcaTca22AY.520.001629
ORF1ab/nsp31103P1103delCCA---22AY.530.000575
ORF1ab/nsp31103P1103LcCacTa22AY.550.001835
ORF1ab/nsp31103P1103QcCacAa22AY.640.00119
ORF1ab/nsp31103P1103QcCacAa22AY.700.000417
ORF1ab/nsp31103P1103SCcaTca22AY.9.10.000167
ORF1ab/nsp31103P1103delCCA---22AY.9.20.000073
ORF1ab/nsp31103P1103LcCacTa22AY.9.20.000073
ORF1ab/nsp31103P1103SCcaTca22AY.980.000158
ORF1ab/nsp31103P1103QcCacAa22B0.000256
ORF1ab/nsp31103P1103TCcaAca22B.10.000018
ORF1ab/nsp31103P1103RcCacGa22B.10.000018
ORF1ab/nsp31103P1103PccAccT12B.1.10.000018
ORF1ab/nsp31103P1103PccAccG12B.1.10.000018
ORF1ab/nsp31103P1103SCcaTca22B.1.1.100.00223
ORF1ab/nsp31103P1103SCcaTca22B.1.1.1170.019417
ORF1ab/nsp31103P1103LcCacTa22B.1.1.1760.000879
ORF1ab/nsp31103P1103SCcaTca22B.1.1.2200.003717
ORF1ab/nsp31103P1103LcCacTa22B.1.1.2430.008163
ORF1ab/nsp31103P1103QcCacAa22B.1.1.2800.006173
ORF1ab/nsp31103P1103SCcaTca22B.1.1.2820.023256
ORF1ab/nsp31103P1103SCcaTca22B.1.1.3060.000877
ORF1ab/nsp31103P1103SCcaTca22B.1.1.3180.000604
ORF1ab/nsp31103P1103LcCacTa22B.1.1.3480.001592
ORF1ab/nsp31103P1103SCcaTca22B.1.1.3540.008772
ORF1ab/nsp31103P1103SCcaTca22B.1.1.3720.001377
ORF1ab/nsp31103P1103SCcaTca22B.1.1.3740.004751
ORF1ab/nsp31103P1103SCcaTca22B.1.1.4090.005666
ORF1ab/nsp31103P1103LcCacTa22B.1.1.4320.002532
ORF1ab/nsp31103P1103PccAccG22B.1.1.4340.000697
ORF1ab/nsp31103P1103LcCacTa22B.1.1.460.008734
ORF1ab/nsp31103P1103SCcaTca22B.1.1.5240.041667
ORF1ab/nsp31103P1103RcCacGa22B.1.1.70.000002
ORF1ab/nsp31103P1103del1Cca-ca12B.1.1.70.000001
ORF1ab/nsp31103P1103del1ccAcc-12B.1.1.70.000001
ORF1ab/nsp31103P1103LcCacTa22B.1.1.700.000682
ORF1ab/nsp31103P1103LcCacTa22B.1.110.30.001437
ORF1ab/nsp31103P1103TCcaAca22B.1.1600.000062
ORF1ab/nsp31103P1103QcCacAa22B.1.160.160.001859
ORF1ab/nsp31103P1103LcCacTa22B.1.1610.034483
ORF1ab/nsp31103P1103delCCA---22B.1.1770.000026
ORF1ab/nsp31103P1103LcCacTa22B.1.177.110.003396
ORF1ab/nsp31103P1103SCcaTca22B.1.177.150.001262
ORF1ab/nsp31103P1103LcCacTa22B.1.177.150.001262
ORF1ab/nsp31103P1103SCcaTca22B.1.177.330.003289
ORF1ab/nsp31103P1103LcCacTa22B.1.177.330.003289
ORF1ab/nsp31103P1103SCcaTca22B.1.177.380.020833
ORF1ab/nsp31103P1103SCcaTca22B.1.177.440.001038
ORF1ab/nsp31103P1103del1ccAcc-22B.1.20.000018
ORF1ab/nsp31103P1103ACcaGca22B.1.20.000018
ORF1ab/nsp31103P1103PccAccG22B.1.2210.000142
ORF1ab/nsp31103P1103LcCacTa22B.1.2800.014286
ORF1ab/nsp31103P1103SCcaTca22B.1.3110.000549
ORF1ab/nsp31103P1103QcCacAa22B.1.3200.002491
ORF1ab/nsp31103P1103RcCacGa22B.1.3510.000059
ORF1ab/nsp31103P1103LcCacTa22B.1.36.180.00084
ORF1ab/nsp31103P1103SCcaTca22B.1.36.310.003503
ORF1ab/nsp31103P1103LcCacTa22B.1.3670.001585
ORF1ab/nsp31103P1103LcCacTa22B.1.4250.005988
ORF1ab/nsp31103P1103LcCacTa22B.1.4280.002041
ORF1ab/nsp31103P1103SCcaTca22B.1.438.10.000215
ORF1ab/nsp31103P1103SCcaTca22B.1.4990.002101
ORF1ab/nsp31103P1103QcCacAa22B.1.5170.000854
ORF1ab/nsp31103P1103QcCacAa22B.1.5250.000226
ORF1ab/nsp31103P1103LcCacTa22B.1.5470.04878
ORF1ab/nsp31103P1103SCcaTca22B.1.5680.002222
ORF1ab/nsp31103P1103LcCacTa22B.1.5820.000981
ORF1ab/nsp31103P1103SCcaTca22B.1.6020.013072
ORF1ab/nsp31103P1103LcCacTa22B.1.6120.005305
ORF1ab/nsp31103P1103SCcaTca22B.1.621.10.001012
ORF1ab/nsp31103P1103LcCacTa22C.360.001821
ORF1ab/nsp31103P1103delCCA---22C.370.000232
ORF1ab/nsp31103P1103PccAccG22D.20.00015
ORF1ab/nsp31103P1103delCCA---22P.10.000032
ORF1ab/nsp31103P1103PccAccT22P.10.000032
ORF1ab/nsp31103P1103SCcaTca22P.1.150.000465
ORF1ab/nsp31103P1103LcCacTa22P.1.170.000324
ORF1ab/nsp31103P1103SCcaTca22P.1.20.002312
ORF1ab/nsp31103P1103LcCacTa22P.1.70.000639
ORF1ab/nsp31103P1103SCcaTca22Q.30.00029
ORF1ab/nsp31103P1103LcCacTa22Q.30.00029
ORF1ab/nsp31103P1103LcCacTa11A0.000387
ORF1ab/nsp31103P1103PccAccT11A0.000387
ORF1ab/nsp31103P1103SCcaTca11A.2.40.003367
ORF1ab/nsp31103P1103LcCacTa11A.2.50.000499
ORF1ab/nsp31103P1103SCcaTca11A.210.00277
ORF1ab/nsp31103P1103SCcaTca11A.220.066667
ORF1ab/nsp31103P1103SCcaTca11A.250.018182
ORF1ab/nsp31103P1103SCcaTca11A.270.001656
ORF1ab/nsp31103P1103LcCacTa11A.290.005319
ORF1ab/nsp31103P1103ICCaATa11All0
ORF1ab/nsp31103P1103LcCacTa11AY.10.000396
ORF1ab/nsp31103P1103QcCacAa11AY.100.00053
ORF1ab/nsp31103P1103ACcaGca11AY.1020.000027
ORF1ab/nsp31103P1103RcCacGa11AY.1030.000006
ORF1ab/nsp31103P1103LcCacTa11AY.1090.00074
ORF1ab/nsp31103P1103SCcaTca11AY.1090.00074
ORF1ab/nsp31103P1103RcCacGa11AY.1130.000142
ORF1ab/nsp31103P1103PccAccG11AY.1130.000142
ORF1ab/nsp31103P1103LcCacTa11AY.1140.000231
ORF1ab/nsp31103P1103LcCacTa11AY.1160.000287
ORF1ab/nsp31103P1103PccAccC11AY.1170.000085
ORF1ab/nsp31103P1103PccAccT11AY.1180.000063
ORF1ab/nsp31103P1103QcCacAa11AY.1190.000035
ORF1ab/nsp31103P1103LcCacTa11AY.120.000316
ORF1ab/nsp31103P1103QcCacAa11AY.120.000316
ORF1ab/nsp31103P1103SCcaTca11AY.1210.000135
ORF1ab/nsp31103P1103LcCacTa11AY.130.000161
ORF1ab/nsp31103P1103PccAccG11AY.140.000088
ORF1ab/nsp31103P1103QcCacAa11AY.200.000039
ORF1ab/nsp31103P1103RcCacGa11AY.240.000431
ORF1ab/nsp31103P1103KCCaAAa11AY.250.000006
ORF1ab/nsp31103P1103PccAccG11AY.260.000028
ORF1ab/nsp31103P1103del1Cca-ca11AY.260.000028
ORF1ab/nsp31103P1103QcCacAa11AY.270.000065
ORF1ab/nsp31103P1103QcCacAa11AY.280.00189
ORF1ab/nsp31103P1103PccAccC11AY.290.000016
ORF1ab/nsp31103P1103RcCacGa11AY.29.10.000221
ORF1ab/nsp31103P1103LcCacTa11AY.29.10.000221
ORF1ab/nsp31103P1103QcCacAa11AY.29.10.000221
ORF1ab/nsp31103P1103LcCacTa11AY.320.000532
ORF1ab/nsp31103P1103ACcaGca11AY.330.000067
ORF1ab/nsp31103P1103SCcaTca11AY.370.000316
ORF1ab/nsp31103P1103PccAccC11AY.390.000025
ORF1ab/nsp31103P1103ACcaGca11AY.390.000025
ORF1ab/nsp31103P1103ACcaGca11AY.39.10.00004
ORF1ab/nsp31103P1103delCCA---11AY.4.20.000022
ORF1ab/nsp31103P1103RcCacGa11AY.4.30.000842
ORF1ab/nsp31103P1103QcCacAa11AY.4.30.000842
ORF1ab/nsp31103P1103SCcaTca11AY.4.40.000409
ORF1ab/nsp31103P1103LcCacTa11AY.4.50.000107
ORF1ab/nsp31103P1103QcCacAa11AY.410.000294
ORF1ab/nsp31103P1103del2cCAc--11AY.430.000004
ORF1ab/nsp31103P1103del1cCAcT-11AY.430.000004
ORF1ab/nsp31103P1103del1Cca-ca11AY.440.000006
ORF1ab/nsp31103P1103RcCacGa11AY.440.000006
ORF1ab/nsp31103P1103PccAccC11AY.460.000104
ORF1ab/nsp31103P1103TCcaAca11AY.460.000104
ORF1ab/nsp31103P1103LcCacTa11AY.46.10.001027
ORF1ab/nsp31103P1103LcCacTa11AY.46.20.000635
ORF1ab/nsp31103P1103LcCacTa11AY.46.50.000198
ORF1ab/nsp31103P1103QcCacAa11AY.46.60.000072
ORF1ab/nsp31103P1103delCCA---11AY.46.60.000072
ORF1ab/nsp31103P1103TCcaAca11AY.470.000031
ORF1ab/nsp31103P1103LcCacTa11AY.490.003195
ORF1ab/nsp31103P1103QcCacAa11AY.490.003195
ORF1ab/nsp31103P1103LcCacTa11AY.5.30.000337
ORF1ab/nsp31103P1103LcCacTa11AY.510.000909
ORF1ab/nsp31103P1103delCCA---11AY.520.000814
ORF1ab/nsp31103P1103delCCA---11AY.540.000095
ORF1ab/nsp31103P1103PccAccC11AY.570.000656
ORF1ab/nsp31103P1103SCcaTca11AY.580.000907
ORF1ab/nsp31103P1103LcCacTa11AY.580.000907
ORF1ab/nsp31103P1103QcCacAa11AY.580.000907
ORF1ab/nsp31103P1103PccAccG11AY.60.000041
ORF1ab/nsp31103P1103PccAccG11AY.600.000938
ORF1ab/nsp31103P1103delCCA---11AY.610.000105
ORF1ab/nsp31103P1103PccAccG11AY.650.000533
ORF1ab/nsp31103P1103QcCacAa11AY.650.000533
ORF1ab/nsp31103P1103RcCacGa11AY.650.000533
ORF1ab/nsp31103P1103delCCA---11AY.650.000533
ORF1ab/nsp31103P1103SCcaTca11AY.660.00107
ORF1ab/nsp31103P1103delCCA---11AY.660.00107
ORF1ab/nsp31103P1103QcCacAa11AY.670.000464
ORF1ab/nsp31103P1103ACcaGca11AY.670.000464
ORF1ab/nsp31103P1103LcCacTa11AY.670.000464
ORF1ab/nsp31103P1103SCcaTca11AY.670.000464
ORF1ab/nsp31103P1103SCcaTca11AY.70.000196
ORF1ab/nsp31103P1103LcCacTa11AY.700.000209
ORF1ab/nsp31103P1103delCCA---11AY.710.000475
ORF1ab/nsp31103P1103QcCacAa11AY.710.000475
ORF1ab/nsp31103P1103SCcaTca11AY.710.000475
ORF1ab/nsp31103P1103SCcaTca11AY.740.000116
ORF1ab/nsp31103P1103QcCacAa11AY.75.10.00018
ORF1ab/nsp31103P1103LcCacTa11AY.770.001127
ORF1ab/nsp31103P1103LcCacTa11AY.790.001211
ORF1ab/nsp31103P1103PccAccC11AY.80.000606
ORF1ab/nsp31103P1103QcCacAa11AY.820.001357
ORF1ab/nsp31103P1103RcCAcGT11AY.840.000437
ORF1ab/nsp31103P1103SCcaTca11AY.840.000437
ORF1ab/nsp31103P1103delCCA---11AY.850.000427
ORF1ab/nsp31103P1103QcCacAa11AY.910.00073
ORF1ab/nsp31103P1103LcCacTa11AY.930.000273
ORF1ab/nsp31103P1103QcCacAa11AY.960.002075
ORF1ab/nsp31103P1103TCcaAca11AY.98.10.000048
ORF1ab/nsp31103P1103delCCA---11AY.990.001049
ORF1ab/nsp31103P1103LcCacTa11AY.99.20.000092
ORF1ab/nsp31103P1103LcCacTa11AZ.20.000821
ORF1ab/nsp31103P1103del1Cca-ca11B0.000128
ORF1ab/nsp31103P1103KCCaAAa11B.10.000009
ORF1ab/nsp31103P1103del1Cca-ca11B.10.000009
ORF1ab/nsp31103P1103TCcaAca11B.1.10.000018
ORF1ab/nsp31103P1103ICCaATa11B.1.10.000018
ORF1ab/nsp31103P1103SCcaTca11B.1.1.10.000327
ORF1ab/nsp31103P1103QcCacAa11B.1.1.100.001115
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1010.01
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1340.011364
ORF1ab/nsp31103P1103SCcaTca11B.1.1.1350.004695
ORF1ab/nsp31103P1103SCcaTca11B.1.1.1480.008772
ORF1ab/nsp31103P1103SCcaTca11B.1.1.1530.001095
ORF1ab/nsp31103P1103SCcaTca11B.1.1.1570.000913
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1700.001247
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1890.001513
ORF1ab/nsp31103P1103LcCacTa11B.1.1.1920.002309
ORF1ab/nsp31103P1103delCCA---11B.1.1.2070.001182
ORF1ab/nsp31103P1103SCcaTca11B.1.1.2100.005714
ORF1ab/nsp31103P1103SCcaTca11B.1.1.2140.000055
ORF1ab/nsp31103P1103RCCaAGa11B.1.1.2160.00089
ORF1ab/nsp31103P1103SCcaTca11B.1.1.2160.00089
ORF1ab/nsp31103P1103TCcaAca11B.1.1.2430.004082
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2440.015385
ORF1ab/nsp31103P1103LcCacTa11B.1.1.250.000569
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2630.001558
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2690.001353
ORF1ab/nsp31103P1103SCcaTca11B.1.1.2740.005051
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2740.005051
ORF1ab/nsp31103P1103SCcaTca11B.1.1.2770.000759
ORF1ab/nsp31103P1103TCcaAca11B.1.1.2840.000107
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2910.000742
ORF1ab/nsp31103P1103QcCacAa11B.1.1.2940.001266
ORF1ab/nsp31103P1103PccAccT11B.1.1.2940.001266
ORF1ab/nsp31103P1103LcCacTa11B.1.1.2980.000862
ORF1ab/nsp31103P1103delCCA---11B.1.1.3110.000358
ORF1ab/nsp31103P1103SCcaTca11B.1.1.330.000421
ORF1ab/nsp31103P1103delCCA---11B.1.1.3480.000796
ORF1ab/nsp31103P1103SCcaTca11B.1.1.370.000193
ORF1ab/nsp31103P1103PccAccT11B.1.1.3710.010417
ORF1ab/nsp31103P1103LcCacTa11B.1.1.3740.002375
ORF1ab/nsp31103P1103ACcaGca11B.1.1.390.00051
ORF1ab/nsp31103P1103LcCacTa11B.1.1.390.00051
ORF1ab/nsp31103P1103SCcaTca11B.1.1.3980.003226
ORF1ab/nsp31103P1103LcCacTa11B.1.1.3980.003226
ORF1ab/nsp31103P1103SCcaTca11B.1.1.4020.011111
ORF1ab/nsp31103P1103delCCA---11B.1.1.4090.002833
ORF1ab/nsp31103P1103SCcaTca11B.1.1.4110.014706
ORF1ab/nsp31103P1103LcCacTa11B.1.1.4160.000905
ORF1ab/nsp31103P1103SCcaTca11B.1.1.4160.000905
ORF1ab/nsp31103P1103SCcaTca11B.1.1.4480.002033
ORF1ab/nsp31103P1103LcCacTa11B.1.1.4480.002033
ORF1ab/nsp31103P1103SCcaTca11B.1.1.4850.016667
ORF1ab/nsp31103P1103SCcaTca11B.1.1.5180.006329
ORF1ab/nsp31103P1103QcCacAa11B.1.1.5190.00004
ORF1ab/nsp31103P1103SCcaTca11B.1.1.520.012195
ORF1ab/nsp31103P1103SCcaTca11B.1.1.5210.005348
ORF1ab/nsp31103P1103SCcaTca11B.1.1.5230.001563
ORF1ab/nsp31103P1103SCcaTca11B.1.1.5280.004808
ORF1ab/nsp31103P1103SCcaTca11B.1.1.610.008772
ORF1ab/nsp31103P1103LcCacTa11B.1.1.630.000386
ORF1ab/nsp31103P1103del2cCAc--11B.1.1.70.000001
ORF1ab/nsp31103P1103QcCacAa11B.1.1.720.030303
ORF1ab/nsp31103P1103PccAccG11B.1.1150.021739
ORF1ab/nsp31103P1103SCcaTca11B.1.130.002375
ORF1ab/nsp31103P1103SCcaTca11B.1.1490.003425
ORF1ab/nsp31103P1103LcCacTa11B.1.1620.005025
ORF1ab/nsp31103P1103SCcaTca11B.1.177.100.000878
ORF1ab/nsp31103P1103LcCacTa11B.1.177.100.000878
ORF1ab/nsp31103P1103SCcaTca11B.1.177.110.001698
ORF1ab/nsp31103P1103LcCacTa11B.1.177.120.000152
ORF1ab/nsp31103P1103SCcaTca11B.1.177.160.000664
ORF1ab/nsp31103P1103del1Cca-ca11B.1.177.180.00116
ORF1ab/nsp31103P1103SCcaTca11B.1.177.200.001517
ORF1ab/nsp31103P1103delCCA---11B.1.177.320.00135
ORF1ab/nsp31103P1103LcCacTa11B.1.177.460.000918
ORF1ab/nsp31103P1103delCCA---11B.1.177.510.004566
ORF1ab/nsp31103P1103SCcaTca11B.1.177.540.000606
ORF1ab/nsp31103P1103QcCacAa11B.1.177.560.000668
ORF1ab/nsp31103P1103SCcaTca11B.1.177.570.000281
ORF1ab/nsp31103P1103LcCacTa11B.1.177.580.001332
ORF1ab/nsp31103P1103PccAccT11B.1.177.60.000977
ORF1ab/nsp31103P1103LcCacTa11B.1.177.650.000665
ORF1ab/nsp31103P1103LcCacTa11B.1.177.730.000566
ORF1ab/nsp31103P1103SCcaTca11B.1.177.750.001041
ORF1ab/nsp31103P1103LcCacTa11B.1.177.750.001041
ORF1ab/nsp31103P1103LcCacTa11B.1.177.790.002342
ORF1ab/nsp31103P1103SCcaTca11B.1.177.790.002342
ORF1ab/nsp31103P1103LcCacTa11B.1.1890.004292
ORF1ab/nsp31103P1103SCcaTca11B.1.1950.005025
ORF1ab/nsp31103P1103delCCA---11B.1.20.000009
ORF1ab/nsp31103P1103RcCacGa11B.1.20.000009
ORF1ab/nsp31103P1103TCcaAca11B.1.20.000009
ORF1ab/nsp31103P1103LcCacTa11B.1.2060.000816
ORF1ab/nsp31103P1103LcCacTa11B.1.2100.002132
ORF1ab/nsp31103P1103LcCacTa11B.1.214.20.0006
ORF1ab/nsp31103P1103SCcaTca11B.1.220.001318
ORF1ab/nsp31103P1103LcCacTa11B.1.2200.01087
ORF1ab/nsp31103P1103SCcaTca11B.1.2320.000537
ORF1ab/nsp31103P1103QcCacAa11B.1.2360.002053
ORF1ab/nsp31103P1103LcCacTa11B.1.2390.001221
ORF1ab/nsp31103P1103SCcaTca11B.1.2400.000216
ORF1ab/nsp31103P1103PccAccC11B.1.2430.00007
ORF1ab/nsp31103P1103LcCacTa11B.1.258.110.000396
ORF1ab/nsp31103P1103LcCacTa11B.1.258.140.00098
ORF1ab/nsp31103P1103TCcaAca11B.1.258.170.000104
ORF1ab/nsp31103P1103SCcaTca11B.1.258.40.003448
ORF1ab/nsp31103P1103LcCacTa11B.1.2670.018519
ORF1ab/nsp31103P1103LcCacTa11B.1.2790.000514
ORF1ab/nsp31103P1103SCcaTca11B.1.2790.000514
ORF1ab/nsp31103P1103LcCacTa11B.1.3100.047619
ORF1ab/nsp31103P1103SCcaTca11B.1.3240.001605
ORF1ab/nsp31103P1103SCcaTca11B.1.3490.000715
ORF1ab/nsp31103P1103delCCA---11B.1.3510.00003
ORF1ab/nsp31103P1103PccAccG11B.1.3510.00003
ORF1ab/nsp31103P1103SCcaTca11B.1.351.20.000303
ORF1ab/nsp31103P1103SCcaTca11B.1.351.50.0006
ORF1ab/nsp31103P1103SCcaTca11B.1.3590.022727
ORF1ab/nsp31103P1103QcCacAa11B.1.360.000146
ORF1ab/nsp31103P1103LcCacTa11B.1.36.100.004785
ORF1ab/nsp31103P1103LcCacTa11B.1.36.190.009259
ORF1ab/nsp31103P1103LcCacTa11B.1.36.220.001208
ORF1ab/nsp31103P1103SCcaTca11B.1.36.290.000517
ORF1ab/nsp31103P1103LcCacTa11B.1.36.350.002604
ORF1ab/nsp31103P1103SCcaTca11B.1.36.370.002778
ORF1ab/nsp31103P1103SCcaTca11B.1.36.390.002217
ORF1ab/nsp31103P1103SCcaTca11B.1.36.80.001
ORF1ab/nsp31103P1103LcCacTa11B.1.3610.001289
ORF1ab/nsp31103P1103SCcaTca11B.1.3670.000792
ORF1ab/nsp31103P1103SCcaTca11B.1.3690.000285
ORF1ab/nsp31103P1103LcCacTa11B.1.3690.000285
ORF1ab/nsp31103P1103LcCacTa11B.1.3710.001122
ORF1ab/nsp31103P1103SCcaTca11B.1.3710.001122
ORF1ab/nsp31103P1103LcCacTa11B.1.3750.00082
ORF1ab/nsp31103P1103LcCacTa11B.1.3780.006849
ORF1ab/nsp31103P1103SCcaTca11B.1.3890.001002
ORF1ab/nsp31103P1103LcCacTa11B.1.3970.004854
ORF1ab/nsp31103P1103SCcaTca11B.1.3980.002976
ORF1ab/nsp31103P1103LcCacTa11B.1.3990.001934
ORF1ab/nsp31103P1103LcCacTa11B.1.4000.000429
ORF1ab/nsp31103P1103SCcaTca11B.1.4030.003268
ORF1ab/nsp31103P1103LcCacTa11B.1.416.10.001563
ORF1ab/nsp31103P1103delCCA---11B.1.416.10.001563
ORF1ab/nsp31103P1103LcCacTa11B.1.4260.001009
ORF1ab/nsp31103P1103SCcaTca11B.1.4260.001009
ORF1ab/nsp31103P1103QcCacAa11B.1.4270.00005
ORF1ab/nsp31103P1103SCcaTca11B.1.4320.011236
ORF1ab/nsp31103P1103LcCacTa11B.1.438.10.000107
ORF1ab/nsp31103P1103LcCacTa11B.1.438.20.019231
ORF1ab/nsp31103P1103LcCacTa11B.1.4560.003268
ORF1ab/nsp31103P1103RcCacGa11B.1.4600.017857
ORF1ab/nsp31103P1103LcCacTa11B.1.466.20.000391
ORF1ab/nsp31103P1103LcCacTa11B.1.4700.001404
ORF1ab/nsp31103P1103LcCacTa11B.1.4730.019231
ORF1ab/nsp31103P1103del2cCAc--11B.1.4870.019608
ORF1ab/nsp31103P1103SCcaTca11B.1.5090.000866
ORF1ab/nsp31103P1103del1ccAcc-11B.1.5160.001957
ORF1ab/nsp31103P1103ACcaGca11B.1.5250.000113
ORF1ab/nsp31103P1103delCCA---11B.1.5260.000024
ORF1ab/nsp31103P1103SCcaTca11B.1.5300.007143
ORF1ab/nsp31103P1103LcCacTa11B.1.5330.009615
ORF1ab/nsp31103P1103LcCacTa11B.1.5370.02
ORF1ab/nsp31103P1103SCcaTca11B.1.5370.02
ORF1ab/nsp31103P1103LcCacTa11B.1.5400.009709
ORF1ab/nsp31103P1103SCcaTca11B.1.5430.01
ORF1ab/nsp31103P1103LcCacTa11B.1.5460.003704
ORF1ab/nsp31103P1103SCcaTca11B.1.5600.00463
ORF1ab/nsp31103P1103LcCacTa11B.1.5610.000397
ORF1ab/nsp31103P1103LcCacTa11B.1.5640.000426
ORF1ab/nsp31103P1103SCcaTca11B.1.5640.000426
ORF1ab/nsp31103P1103SCcaTca11B.1.5740.002151
ORF1ab/nsp31103P1103SCcaTca11B.1.5760.000907
ORF1ab/nsp31103P1103LcCacTa11B.1.5770.000687
ORF1ab/nsp31103P1103del1ccAcc-11B.1.5950.000261
ORF1ab/nsp31103P1103QcCacAa11B.1.6090.000479
ORF1ab/nsp31103P1103SCcaTca11B.1.6110.04
ORF1ab/nsp31103P1103SCcaTca11B.1.617.10.000129
ORF1ab/nsp31103P1103PccAccG11B.1.617.10.000129
ORF1ab/nsp31103P1103LcCacTa11B.1.621.10.000506
ORF1ab/nsp31103P1103LcCacTa11B.1.6230.000536
ORF1ab/nsp31103P1103SCcaTca11B.1.6250.002353
ORF1ab/nsp31103P1103LcCacTa11B.1.6280.000352
ORF1ab/nsp31103P1103SCcaTca11B.1.6340.003425
ORF1ab/nsp31103P1103SCcaTca11B.1.690.035714
ORF1ab/nsp31103P1103LcCacTa11B.1.780.008547
ORF1ab/nsp31103P1103LcCacTa11B.1.90.006173
ORF1ab/nsp31103P1103delCCA---11B.150.017544
ORF1ab/nsp31103P1103SCcaTca11B.520.010101
ORF1ab/nsp31103P1103LcCacTa11B.60.00091
ORF1ab/nsp31103P1103TCcaAca11B.60.00091
ORF1ab/nsp31103P1103LcCacTa11B.6.60.000889
ORF1ab/nsp31103P1103LcCacTa11C.300.001727
ORF1ab/nsp31103P1103del2cCAc--11C.350.000774
ORF1ab/nsp31103P1103LcCacTa11C.350.000774
ORF1ab/nsp31103P1103SCcaTca11C.350.000774
ORF1ab/nsp31103P1103PccAccG11C.370.000116
ORF1ab/nsp31103P1103LcCacTa11C.390.018868
ORF1ab/nsp31103P1103LcCacTa11D.20.000075
ORF1ab/nsp31103P1103PccAccT11N.50.001767
ORF1ab/nsp31103P1103LcCacTa11N.50.001767
ORF1ab/nsp31103P1103LcCacTa11N.60.007092
ORF1ab/nsp31103P1103QcCacAa11P.10.000016
ORF1ab/nsp31103P1103TCcaAca11P.10.000016
ORF1ab/nsp31103P1103ACcaGca11P.10.000016
ORF1ab/nsp31103P1103LcCacTa11P.1.10.000318
ORF1ab/nsp31103P1103SCcaTca11P.1.90.004808
ORF1ab/nsp31103P1103PccAccC11P.20.000187
ORF1ab/nsp31103P1103SCcaTca11Q.10.000126
ORF1ab/nsp31103P1103delCCA---11Q.10.000126
ORF1ab/nsp31103P1103PccAccG11Q.10.000126
ORF1ab/nsp31103P1103SCcaTca11Q.20.000613
ORF1ab/nsp31103P1103LcCacTa11Q.40.000455
ORF1ab/nsp31103P1103del1ccAcc-11Q.80.000165
ORF1ab/nsp31103P1103PccAccG11Q.80.000165