CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 110

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3110D110YD928YnonsynGatTat3289328913047-3049
ORF1ab/nsp3110D110DD928DsyngaTgaC2420242013047-3049
ORF1ab/nsp3110D110ED928EnonsyngaTgaG12388680.7011313047-3049
ORF1ab/nsp3110D110ED928EnonsyngaTgaA12383700.2988693047-3049
ORF1ab/nsp3110D110GD928GnonsyngAtgGt6396380.9984353047-3049
ORF1ab/nsp3110D110GD928GnonsyngATgGA63910.001564953047-3049
ORF1ab/nsp3110D110ND928NnonsynGatAat21621613047-3049
ORF1ab/nsp3110D110AD928AnonsyngAtgCt2012000.9950253047-3049
ORF1ab/nsp3110D110AD928AnonsyngATgCA20110.004975123047-3049
ORF1ab/nsp3110D110delD928deldelGAT---444413047-3049
ORF1ab/nsp3110D110VD928VnonsyngAtgTt29270.9310353047-3049
ORF1ab/nsp3110D110VD928VnonsyngATgTA2910.03448283047-3049
ORF1ab/nsp3110D110VD928VnonsyngATgTG2910.03448283047-3049
ORF1ab/nsp3110D110HD928HnonsynGatCat202013047-3049
ORF1ab/nsp3110D110del1D928del1delGat-at530.63047-3049
ORF1ab/nsp3110D110del1D928del1delgaTga-510.23047-3049
ORF1ab/nsp3110D110del1D928del1delgAtg-t510.23047-3049
ORF1ab/nsp3110D110FD928FnonsynGAtTTt3313047-3049
ORF1ab/nsp3110D110del2D928del2delgATg--2213047-3049
ORF1ab/nsp3110D110KD928KnonsynGaTAaA2213047-3049
ORF1ab/nsp3110D110SD928SnonsynGAtAGt1113047-3049
ORF1ab/nsp3110D110LD928LnonsynGATTTA1113047-3049
ORF1ab/nsp3110D110XD928XnonsynGaTTaA1113047-3049

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3110D110YGatTat32893289All0.000629
ORF1ab/nsp3110D110DgaTgaC24202420All0.000463
ORF1ab/nsp3110D110YGatTat12491249AY.40.001944
ORF1ab/nsp3110D110EgaTgaG8681238All0.000166
ORF1ab/nsp3110D110EgaTgaA3701238All0.000071
ORF1ab/nsp3110D110EgaTgaG785785B.1.20.006912
ORF1ab/nsp3110D110DgaTgaC747747P.10.011768
ORF1ab/nsp3110D110GgAtgGt638639All0.000122
ORF1ab/nsp3110D110GgATgGA1639All0
ORF1ab/nsp3110D110YGatTat548548B.1.1.70.000491
ORF1ab/nsp3110D110DgaTgaC339339B.1.1.70.000303
ORF1ab/nsp3110D110EgaTgaA277282B.1.1.70.000248
ORF1ab/nsp3110D110EgaTgaG5282B.1.1.70.000004
ORF1ab/nsp3110D110YGatTat261261AY.440.001589
ORF1ab/nsp3110D110DgaTgaC250250AY.40.000389
ORF1ab/nsp3110D110GgAtgGt224224AY.40.000349
ORF1ab/nsp3110D110NGatAat216216All0.000041
ORF1ab/nsp3110D110AgAtgCt200201All0.000038
ORF1ab/nsp3110D110AgATgCA1201All0
ORF1ab/nsp3110D110DgaTgaC177177B.1.1.2370.956757
ORF1ab/nsp3110D110DgaTgaC148148AY.430.000656
ORF1ab/nsp3110D110YGatTat134134R.10.012061
ORF1ab/nsp3110D110YGatTat120120B.1.617.20.000452
ORF1ab/nsp3110D110GgAtgGt8383AY.1030.000515
ORF1ab/nsp3110D110YGatTat7373AY.430.000323
ORF1ab/nsp3110D110GgAtgGt6464B.1.1.70.000057
ORF1ab/nsp3110D110YGatTat6363B.1.5260.001481
ORF1ab/nsp3110D110DgaTgaC6161B.1.617.20.00023
ORF1ab/nsp3110D110DgaTgaC5454AY.9.20.001983
ORF1ab/nsp3110D110AgAtgCt5050C.36.30.028361
ORF1ab/nsp3110D110GgAtgGt4545B.1.617.20.000169
ORF1ab/nsp3110D110delGAT---4444All0.000008
ORF1ab/nsp3110D110YGatTat4444AY.250.000265
ORF1ab/nsp3110D110NGatAat4343AY.40.000067
ORF1ab/nsp3110D110DgaTgaC4242B.1.3150.254545
ORF1ab/nsp3110D110YGatTat4141AY.290.000647
ORF1ab/nsp3110D110AgAtgCt4040AY.270.002589
ORF1ab/nsp3110D110GgAtgGt3838AY.440.000231
ORF1ab/nsp3110D110AgAtgCt3737AY.40.000058
ORF1ab/nsp3110D110DgaTgaC3737B.1.1770.000487
ORF1ab/nsp3110D110YGatTat3737B.1.177.160.024585
ORF1ab/nsp3110D110YGatTat3636B.1.1.2970.080537
ORF1ab/nsp3110D110YGatTat3434AY.1030.000211
ORF1ab/nsp3110D110DgaTgaC3232AY.260.000906
ORF1ab/nsp3110D110DgaTgaC3232B.1.20.000282
ORF1ab/nsp3110D110YGatTat3030B.10.000275
ORF1ab/nsp3110D110YGatTat3030B.1.4010.245902
ORF1ab/nsp3110D110VgAtgTt2729All0.000005
ORF1ab/nsp3110D110VgATgTA129All0
ORF1ab/nsp3110D110VgATgTG129All0
ORF1ab/nsp3110D110DgaTgaC2929AY.1210.003924
ORF1ab/nsp3110D110GgAtgGt2929P.10.000457
ORF1ab/nsp3110D110DgaTgaC2727AY.250.000162
ORF1ab/nsp3110D110YGatTat2727B.1.10.00049
ORF1ab/nsp3110D110EgaTgaA2626AY.270.001683
ORF1ab/nsp3110D110GgAtgGt2626B.1.4290.000612
ORF1ab/nsp3110D110DgaTgaC2525AY.1030.000155
ORF1ab/nsp3110D110DgaTgaC2525AY.440.000152
ORF1ab/nsp3110D110AgAtgCt2525B.1.1.70.000022
ORF1ab/nsp3110D110NGatAat2525P.1.170.004044
ORF1ab/nsp3110D110NGatAat2424AY.260.000679
ORF1ab/nsp3110D110NGatAat2323B.1.1.70.000021
ORF1ab/nsp3110D110DgaTgaC2222B.1.5260.000517
ORF1ab/nsp3110D110DgaTgaC2121B.1.6210.001859
ORF1ab/nsp3110D110HGatCat2020All0.000004
ORF1ab/nsp3110D110YGatTat2020B.1.6280.007047
ORF1ab/nsp3110D110YGatTat1717AY.1170.001437
ORF1ab/nsp3110D110YGatTat1717B.1.1.630.006559
ORF1ab/nsp3110D110YGatTat1717P.10.000268
ORF1ab/nsp3110D110YGatTat1616AY.200.000622
ORF1ab/nsp3110D110YGatTat1616B.1.1.5190.000635
ORF1ab/nsp3110D110EgaTgaG1516B.1.617.20.000056
ORF1ab/nsp3110D110EgaTgaA116B.1.617.20.000004
ORF1ab/nsp3110D110DgaTgaC1515AY.390.000371
ORF1ab/nsp3110D110DgaTgaC1515B.1.177.810.00284
ORF1ab/nsp3110D110DgaTgaC1515C.370.001741
ORF1ab/nsp3110D110YGatTat1414AY.390.000346
ORF1ab/nsp3110D110YGatTat1414B.1.1600.000437
ORF1ab/nsp3110D110YGatTat1414B.1.1770.000184
ORF1ab/nsp3110D110EgaTgaA1414B.1.1770.000184
ORF1ab/nsp3110D110YGatTat1414B.1.20.000123
ORF1ab/nsp3110D110YGatTat1313AY.170.106557
ORF1ab/nsp3110D110YGatTat1313AY.30.000129
ORF1ab/nsp3110D110DgaTgaC1313AY.30.000129
ORF1ab/nsp3110D110GgAtgGt1313AY.370.004109
ORF1ab/nsp3110D110DgaTgaC1313B.10.000119
ORF1ab/nsp3110D110YGatTat1313B.1.1.3220.114035
ORF1ab/nsp3110D110YGatTat1212AY.1020.000318
ORF1ab/nsp3110D110EgaTgaA1212AY.30.000119
ORF1ab/nsp3110D110DgaTgaC1111AY.1020.000292
ORF1ab/nsp3110D110NGatAat1111AY.640.006548
ORF1ab/nsp3110D110DgaTgaC1111P.1.120.005324
ORF1ab/nsp3110D110YGatTat1010AY.1000.00046
ORF1ab/nsp3110D110EgaTgaG1010AY.430.000044
ORF1ab/nsp3110D110YGatTat1010AY.770.011274
ORF1ab/nsp3110D110YGatTat1010B.1.177.560.006676
ORF1ab/nsp3110D110YGatTat1010B.1.2340.001319
ORF1ab/nsp3110D110YGatTat1010B.1.2430.000696
ORF1ab/nsp3110D110YGatTat1010B.1.2790.005136
ORF1ab/nsp3110D110DgaTgaC1010B.1.3510.000297
ORF1ab/nsp3110D110AgAtgCt910B.1.4290.000212
ORF1ab/nsp3110D110AgATgCA110B.1.4290.000024
ORF1ab/nsp3110D110EgaTgaA1010P.1.140.000478
ORF1ab/nsp3110D110YGatTat99AY.260.000255
ORF1ab/nsp3110D110YGatTat99AY.330.000601
ORF1ab/nsp3110D110YGatTat99AY.4.2.10.001341
ORF1ab/nsp3110D110YGatTat99AY.46.60.00065
ORF1ab/nsp3110D110YGatTat99AY.50.000186
ORF1ab/nsp3110D110DgaTgaC99AY.620.003922
ORF1ab/nsp3110D110NGatAat99B.1.617.20.000034
ORF1ab/nsp3110D110DgaTgaC99P.1.70.002874
ORF1ab/nsp3110D110YGatTat99Q.10.001137
ORF1ab/nsp3110D110YGatTat88AY.116.10.002491
ORF1ab/nsp3110D110GgAtgGt88AY.460.000833
ORF1ab/nsp3110D110DgaTgaC88AY.470.000249
ORF1ab/nsp3110D110YGatTat88AY.9.20.000294
ORF1ab/nsp3110D110YGatTat88B.1.1.2160.007124
ORF1ab/nsp3110D110GgAtgGt78B.1.20.000062
ORF1ab/nsp3110D110GgATgGA18B.1.20.000009
ORF1ab/nsp3110D110YGatTat88B.1.4290.000188
ORF1ab/nsp3110D110GgAtgGt88B.1.4970.002518
ORF1ab/nsp3110D110VgAtgTt88D.20.0006
ORF1ab/nsp3110D110YGatTat88D.20.0006
ORF1ab/nsp3110D110DgaTgaC77AY.46.60.000505
ORF1ab/nsp3110D110NGatAat77AY.470.000218
ORF1ab/nsp3110D110DgaTgaC77AY.610.000733
ORF1ab/nsp3110D110GgAtgGt77AY.690.001307
ORF1ab/nsp3110D110NGatAat77B.10.000064
ORF1ab/nsp3110D110EgaTgaG77B.10.000064
ORF1ab/nsp3110D110EgaTgaG57B.1.1.2370.027027
ORF1ab/nsp3110D110EgaTgaA27B.1.1.2370.010811
ORF1ab/nsp3110D110DgaTgaC77B.1.1.390.003568
ORF1ab/nsp3110D110YGatTat77B.1.1.3970.015766
ORF1ab/nsp3110D110EgaTgaA67B.1.3510.000178
ORF1ab/nsp3110D110EgaTgaG17B.1.3510.00003
ORF1ab/nsp3110D110YGatTat77B.1.360.001021
ORF1ab/nsp3110D110DgaTgaC77B.1.4290.000165
ORF1ab/nsp3110D110YGatTat77B.1.617.10.000903
ORF1ab/nsp3110D110AgAtgCt77B.1.617.20.000026
ORF1ab/nsp3110D110DgaTgaC66AY.1000.000276
ORF1ab/nsp3110D110AgAtgCt66AY.390.000148
ORF1ab/nsp3110D110EgaTgaG56AY.440.00003
ORF1ab/nsp3110D110EgaTgaA16AY.440.000006
ORF1ab/nsp3110D110DgaTgaC66AY.75.10.001082
ORF1ab/nsp3110D110GgAtgGt66B.10.000055
ORF1ab/nsp3110D110NGatAat66B.1.1.330.002525
ORF1ab/nsp3110D110DgaTgaC66B.1.1.370.001157
ORF1ab/nsp3110D110YGatTat66B.1.3510.000178
ORF1ab/nsp3110D110del1Gat-at35All0.000001
ORF1ab/nsp3110D110del1gaTga-15All0
ORF1ab/nsp3110D110del1gAtg-t15All0
ORF1ab/nsp3110D110GgAtgGt55AY.1170.000423
ORF1ab/nsp3110D110EgaTgaG55AY.250.00003
ORF1ab/nsp3110D110VgAtgTt55AY.290.000079
ORF1ab/nsp3110D110DgaTgaC55AY.290.000079
ORF1ab/nsp3110D110YGatTat55AY.340.000485
ORF1ab/nsp3110D110NGatAat55AY.980.000395
ORF1ab/nsp3110D110DgaTgaC55B.1.1.3180.001509
ORF1ab/nsp3110D110AgAtgCt55B.1.2580.000333
ORF1ab/nsp3110D110NGatAat55B.1.5260.000118
ORF1ab/nsp3110D110DgaTgaC55B.1.5960.000436
ORF1ab/nsp3110D110DgaTgaC55C.36.30.002836
ORF1ab/nsp3110D110DgaTgaC55P.1.150.001162
ORF1ab/nsp3110D110DgaTgaC55Q.10.000632
ORF1ab/nsp3110D110delGAT---440.222222
ORF1ab/nsp3110D110YGatTat44A.270.006623
ORF1ab/nsp3110D110DgaTgaC44AY.1100.000451
ORF1ab/nsp3110D110DgaTgaC44AY.200.000155
ORF1ab/nsp3110D110EgaTgaG34AY.40.000005
ORF1ab/nsp3110D110EgaTgaA14AY.40.000002
ORF1ab/nsp3110D110DgaTgaC44AY.4.20.000087
ORF1ab/nsp3110D110YGatTat44AY.4.20.000087
ORF1ab/nsp3110D110DgaTgaC44AY.4.50.00043
ORF1ab/nsp3110D110GgAtgGt44AY.430.000018
ORF1ab/nsp3110D110GgAtgGt44AY.46.60.000289
ORF1ab/nsp3110D110YGatTat44AY.9.10.000335
ORF1ab/nsp3110D110YGatTat44AY.980.000316
ORF1ab/nsp3110D110delGAT---44B.10.000037
ORF1ab/nsp3110D110DgaTgaC44B.1.1.2220.000816
ORF1ab/nsp3110D110DgaTgaC44B.1.1.280.001245
ORF1ab/nsp3110D110YGatTat44B.1.1.3060.001754
ORF1ab/nsp3110D110DgaTgaC44B.1.1.540.012085
ORF1ab/nsp3110D110DgaTgaC44B.1.177.770.002905
ORF1ab/nsp3110D110NGatAat44B.1.2430.000278
ORF1ab/nsp3110D110EgaTgaG24B.1.2580.000133
ORF1ab/nsp3110D110EgaTgaA24B.1.2580.000133
ORF1ab/nsp3110D110YGatTat44B.1.4800.00995
ORF1ab/nsp3110D110YGatTat44C.370.000464
ORF1ab/nsp3110D110EgaTgaA44Q.10.000505
ORF1ab/nsp3110D110GgAtgGt33A0.001161
ORF1ab/nsp3110D110FGAtTTt33All0.000001
ORF1ab/nsp3110D110GgAtgGt33AY.1000.000138
ORF1ab/nsp3110D110EgaTgaA23AY.1030.000012
ORF1ab/nsp3110D110EgaTgaG13AY.1030.000006
ORF1ab/nsp3110D110YGatTat33AY.1160.00086
ORF1ab/nsp3110D110DgaTgaC33AY.1170.000254
ORF1ab/nsp3110D110YGatTat33AY.1200.000112
ORF1ab/nsp3110D110DgaTgaC33AY.1200.000112
ORF1ab/nsp3110D110GgAtgGt33AY.230.000209
ORF1ab/nsp3110D110YGatTat33AY.370.000948
ORF1ab/nsp3110D110GgAtgGt33AY.390.000074
ORF1ab/nsp3110D110delGAT---33AY.40.000005
ORF1ab/nsp3110D110GgAtgGt33AY.50.000062
ORF1ab/nsp3110D110YGatTat33AY.610.000314
ORF1ab/nsp3110D110GgAtgGt33B.1.10.000054
ORF1ab/nsp3110D110DgaTgaC33B.1.10.000054
ORF1ab/nsp3110D110DgaTgaC33B.1.1.2540.033708
ORF1ab/nsp3110D110delGAT---33B.1.1.330.001263
ORF1ab/nsp3110D110delGAT---33B.1.1.70.000003
ORF1ab/nsp3110D110HGatCat33B.1.1770.00004
ORF1ab/nsp3110D110NGatAat33B.1.177.60.00293
ORF1ab/nsp3110D110YGatTat33B.1.2210.000213
ORF1ab/nsp3110D110YGatTat33B.1.2580.0002
ORF1ab/nsp3110D110GgAtgGt33B.1.3490.002144
ORF1ab/nsp3110D110EgaTgaG33B.1.351.30.002629
ORF1ab/nsp3110D110DgaTgaC33B.1.360.000438
ORF1ab/nsp3110D110EgaTgaG33B.1.360.000438
ORF1ab/nsp3110D110NGatAat33B.1.360.000438
ORF1ab/nsp3110D110DgaTgaC33B.1.3990.005803
ORF1ab/nsp3110D110DgaTgaC33B.1.4110.011111
ORF1ab/nsp3110D110DgaTgaC33B.1.438.10.000322
ORF1ab/nsp3110D110YGatTat33B.1.5640.001278
ORF1ab/nsp3110D110EgaTgaG33B.1.5960.000261
ORF1ab/nsp3110D110DgaTgaC33B.1.6090.001438
ORF1ab/nsp3110D110HGatCat33D.20.000225
ORF1ab/nsp3110D110GgAtgGt33N.50.0053
ORF1ab/nsp3110D110YGatTat33N.60.021277
ORF1ab/nsp3110D110DgaTgaC33P.1.10.000953
ORF1ab/nsp3110D110DgaTgaC33P.1.140.000143
ORF1ab/nsp3110D110YGatTat33P.1.70.000958
ORF1ab/nsp3110D110VgAtgTt220.111111
ORF1ab/nsp3110D110GgAtgGt220.111111
ORF1ab/nsp3110D110YGatTat22A.280.005291
ORF1ab/nsp3110D110del2gATg--22All0
ORF1ab/nsp3110D110KGaTAaA22All0
ORF1ab/nsp3110D110AgAtgCt22AY.10.000791
ORF1ab/nsp3110D110AgAtgCt22AY.1030.000012
ORF1ab/nsp3110D110VgATgTA12AY.1050.000643
ORF1ab/nsp3110D110VgAtgTt12AY.1050.000643
ORF1ab/nsp3110D110YGatTat22AY.1060.00067
ORF1ab/nsp3110D110YGatTat22AY.1130.000285
ORF1ab/nsp3110D110GgAtgGt22AY.1130.000285
ORF1ab/nsp3110D110YGatTat22AY.1180.000125
ORF1ab/nsp3110D110DgaTgaC22AY.140.000176
ORF1ab/nsp3110D110YGatTat22AY.140.000176
ORF1ab/nsp3110D110YGatTat22AY.160.000759
ORF1ab/nsp3110D110DgaTgaC22AY.20.000712
ORF1ab/nsp3110D110NGatAat22AY.200.000078
ORF1ab/nsp3110D110GgAtgGt22AY.200.000078
ORF1ab/nsp3110D110YGatTat22AY.230.000139
ORF1ab/nsp3110D110AgAtgCt22AY.250.000012
ORF1ab/nsp3110D110NGatAat22AY.250.000012
ORF1ab/nsp3110D110GgAtgGt22AY.290.000032
ORF1ab/nsp3110D110YGatTat22AY.29.10.000441
ORF1ab/nsp3110D110NGatAat22AY.30.00002
ORF1ab/nsp3110D110DgaTgaC22AY.3.10.000171
ORF1ab/nsp3110D110DgaTgaC22AY.330.000134
ORF1ab/nsp3110D110HGatCat22AY.330.000134
ORF1ab/nsp3110D110DgaTgaC22AY.370.000632
ORF1ab/nsp3110D110YGatTat22AY.39.10.000079
ORF1ab/nsp3110D110GgAtgGt22AY.39.10.000079
ORF1ab/nsp3110D110HGatCat22AY.40.000003
ORF1ab/nsp3110D110NGatAat22AY.430.000009
ORF1ab/nsp3110D110YGatTat22AY.460.000208
ORF1ab/nsp3110D110DgaTgaC22AY.50.000041
ORF1ab/nsp3110D110NGatAat22AY.5.40.000553
ORF1ab/nsp3110D110YGatTat22AY.540.000191
ORF1ab/nsp3110D110DgaTgaC22AY.540.000191
ORF1ab/nsp3110D110DgaTgaC22AY.590.001059
ORF1ab/nsp3110D110NGatAat22AY.590.001059
ORF1ab/nsp3110D110DgaTgaC22AY.60.000082
ORF1ab/nsp3110D110YGatTat22AY.700.000417
ORF1ab/nsp3110D110YGatTat22AY.840.000875
ORF1ab/nsp3110D110YGatTat22AY.90.000135
ORF1ab/nsp3110D110DgaTgaC22AY.9.10.000167
ORF1ab/nsp3110D110AgAtgCt22B.10.000018
ORF1ab/nsp3110D110EgaTgaG12B.1.10.000018
ORF1ab/nsp3110D110EgaTgaA12B.1.10.000018
ORF1ab/nsp3110D110DgaTgaC22B.1.1.2190.01
ORF1ab/nsp3110D110YGatTat22B.1.1.2220.000408
ORF1ab/nsp3110D110delGAT---22B.1.1.3480.001592
ORF1ab/nsp3110D110YGatTat22B.1.1.4190.014815
ORF1ab/nsp3110D110DgaTgaC22B.1.1.5190.000079
ORF1ab/nsp3110D110VgAtgTt22B.1.1.70.000002
ORF1ab/nsp3110D110YGatTat22B.1.1260.002551
ORF1ab/nsp3110D110NGatAat22B.1.1390.001466
ORF1ab/nsp3110D110GgAtgGt22B.1.1770.000026
ORF1ab/nsp3110D110GgAtgGt22B.1.177.370.054054
ORF1ab/nsp3110D110YGatTat22B.1.177.770.001452
ORF1ab/nsp3110D110NGatAat22B.1.20.000018
ORF1ab/nsp3110D110delGAT---22B.1.20.000018
ORF1ab/nsp3110D110EgaTgaG22B.1.2210.000142
ORF1ab/nsp3110D110DgaTgaC22B.1.2210.000142
ORF1ab/nsp3110D110EgaTgaA22B.1.3460.002621
ORF1ab/nsp3110D110DgaTgaC22B.1.36.220.002415
ORF1ab/nsp3110D110YGatTat22B.1.4270.000101
ORF1ab/nsp3110D110GgAtgGt22B.1.4930.051282
ORF1ab/nsp3110D110EgaTgaG22B.1.5260.000047
ORF1ab/nsp3110D110DgaTgaC22B.1.5610.000794
ORF1ab/nsp3110D110GgAtgGt22B.1.5750.000607
ORF1ab/nsp3110D110YGatTat22B.1.5950.000522
ORF1ab/nsp3110D110KGaTAaA22B.1.5960.000174
ORF1ab/nsp3110D110YGatTat22B.1.5970.009259
ORF1ab/nsp3110D110YGatTat22B.1.6180.008065
ORF1ab/nsp3110D110YGatTat22B.1.6370.000146
ORF1ab/nsp3110D110FGAtTTt22D.20.00015
ORF1ab/nsp3110D110delGAT---22N.60.014184
ORF1ab/nsp3110D110NGatAat22P.1.140.000096
ORF1ab/nsp3110D110YGatTat22P.1.170.000324
ORF1ab/nsp3110D110GgAtgGt22P.20.000373
ORF1ab/nsp3110D110YGatTat22Q.80.00033
ORF1ab/nsp3110D110DgaTgaC22R.10.00018
ORF1ab/nsp3110D110EgaTgaA110.055556
ORF1ab/nsp3110D110YGatTat11A.20.000662
ORF1ab/nsp3110D110YGatTat11A.2.50.000499
ORF1ab/nsp3110D110EgaTgaG11A.60.005128
ORF1ab/nsp3110D110DgaTgaC11AD.20.000219
ORF1ab/nsp3110D110SGAtAGt11All0
ORF1ab/nsp3110D110XGaTTaA11All0
ORF1ab/nsp3110D110LGATTTA11All0
ORF1ab/nsp3110D110YGatTat11AU.20.002421
ORF1ab/nsp3110D110DgaTgaC11AY.10.000396
ORF1ab/nsp3110D110EgaTgaA11AY.1000.000046
ORF1ab/nsp3110D110VgATgTG11AY.1000.000046
ORF1ab/nsp3110D110NGatAat11AY.1030.000006
ORF1ab/nsp3110D110XGaTTaA11AY.1050.000643
ORF1ab/nsp3110D110LGATTTA11AY.1050.000643
ORF1ab/nsp3110D110FGAtTTt11AY.1050.000643
ORF1ab/nsp3110D110YGatTat11AY.1050.000643
ORF1ab/nsp3110D110EgaTgaA11AY.1050.000643
ORF1ab/nsp3110D110NGatAat11AY.1050.000643
ORF1ab/nsp3110D110DgaTgaC11AY.1130.000142
ORF1ab/nsp3110D110YGatTat11AY.1140.000231
ORF1ab/nsp3110D110DgaTgaC11AY.116.10.000311
ORF1ab/nsp3110D110NGatAat11AY.1170.000085
ORF1ab/nsp3110D110EgaTgaA11AY.1170.000085
ORF1ab/nsp3110D110GgAtgGt11AY.1190.000035
ORF1ab/nsp3110D110NGatAat11AY.1190.000035
ORF1ab/nsp3110D110YGatTat11AY.1190.000035
ORF1ab/nsp3110D110YGatTat11AY.120.000316
ORF1ab/nsp3110D110GgAtgGt11AY.120.000316
ORF1ab/nsp3110D110AgAtgCt11AY.120.000316
ORF1ab/nsp3110D110YGatTat11AY.1210.000135
ORF1ab/nsp3110D110AgAtgCt11AY.140.000088
ORF1ab/nsp3110D110YGatTat11AY.16.10.00047
ORF1ab/nsp3110D110YGatTat11AY.20.000356
ORF1ab/nsp3110D110DgaTgaC11AY.210.001898
ORF1ab/nsp3110D110DgaTgaC11AY.23.10.000417
ORF1ab/nsp3110D110delGAT---11AY.250.000006
ORF1ab/nsp3110D110delGAT---11AY.260.000028
ORF1ab/nsp3110D110GgAtgGt11AY.260.000028
ORF1ab/nsp3110D110DgaTgaC11AY.270.000065
ORF1ab/nsp3110D110HGatCat11AY.270.000065
ORF1ab/nsp3110D110delGAT---11AY.30.00001
ORF1ab/nsp3110D110EgaTgaA11AY.3.10.000085
ORF1ab/nsp3110D110AgAtgCt11AY.3.10.000085
ORF1ab/nsp3110D110GgAtgGt11AY.3.10.000085
ORF1ab/nsp3110D110NGatAat11AY.300.000396
ORF1ab/nsp3110D110delGAT---11AY.300.000396
ORF1ab/nsp3110D110GgAtgGt11AY.330.000067
ORF1ab/nsp3110D110delGAT---11AY.340.000097
ORF1ab/nsp3110D110DgaTgaC11AY.34.10.00051
ORF1ab/nsp3110D110DgaTgaC11AY.360.000148
ORF1ab/nsp3110D110DgaTgaC11AY.380.000499
ORF1ab/nsp3110D110EgaTgaA11AY.390.000025
ORF1ab/nsp3110D110DgaTgaC11AY.39.20.001541
ORF1ab/nsp3110D110del1gaTga-11AY.40.000002
ORF1ab/nsp3110D110YGatTat11AY.4.10.000737
ORF1ab/nsp3110D110GgAtgGt11AY.4.20.000022
ORF1ab/nsp3110D110HGatCat11AY.4.2.10.000149
ORF1ab/nsp3110D110YGatTat11AY.4.40.000409
ORF1ab/nsp3110D110YGatTat11AY.4.50.000107
ORF1ab/nsp3110D110DgaTgaC11AY.420.00004
ORF1ab/nsp3110D110delGAT---11AY.420.00004
ORF1ab/nsp3110D110YGatTat11AY.420.00004
ORF1ab/nsp3110D110AgAtgCt11AY.430.000004
ORF1ab/nsp3110D110delGAT---11AY.430.000004
ORF1ab/nsp3110D110del2gATg--11AY.430.000004
ORF1ab/nsp3110D110NGatAat11AY.440.000006
ORF1ab/nsp3110D110VgAtgTt11AY.440.000006
ORF1ab/nsp3110D110DgaTgaC11AY.450.000122
ORF1ab/nsp3110D110delGAT---11AY.460.000104
ORF1ab/nsp3110D110DgaTgaC11AY.460.000104
ORF1ab/nsp3110D110YGatTat11AY.46.40.000165
ORF1ab/nsp3110D110DgaTgaC11AY.46.40.000165
ORF1ab/nsp3110D110delGAT---11AY.50.000021
ORF1ab/nsp3110D110HGatCat11AY.50.000021
ORF1ab/nsp3110D110NGatAat11AY.50.000021
ORF1ab/nsp3110D110YGatTat11AY.5.30.000337
ORF1ab/nsp3110D110YGatTat11AY.5.40.000277
ORF1ab/nsp3110D110GgAtgGt11AY.5.40.000277
ORF1ab/nsp3110D110YGatTat11AY.550.000917
ORF1ab/nsp3110D110NGatAat11AY.550.000917
ORF1ab/nsp3110D110NGatAat11AY.60.000041
ORF1ab/nsp3110D110HGatCat11AY.610.000105
ORF1ab/nsp3110D110YGatTat11AY.620.000436
ORF1ab/nsp3110D110DgaTgaC11AY.650.000533
ORF1ab/nsp3110D110delGAT---11AY.650.000533
ORF1ab/nsp3110D110YGatTat11AY.7.10.000113
ORF1ab/nsp3110D110YGatTat11AY.710.000475
ORF1ab/nsp3110D110GgAtgGt11AY.710.000475
ORF1ab/nsp3110D110DgaTgaC11AY.730.000665
ORF1ab/nsp3110D110DgaTgaC11AY.750.000056
ORF1ab/nsp3110D110YGatTat11AY.75.10.00018
ORF1ab/nsp3110D110AgAtgCt11AY.75.10.00018
ORF1ab/nsp3110D110YGatTat11AY.820.001357
ORF1ab/nsp3110D110DgaTgaC11AY.820.001357
ORF1ab/nsp3110D110EgaTgaA11AY.90.000068
ORF1ab/nsp3110D110DgaTgaC11AY.90.000068
ORF1ab/nsp3110D110NGatAat11AY.9.20.000037
ORF1ab/nsp3110D110YGatTat11AY.900.000684
ORF1ab/nsp3110D110DgaTgaC11AY.910.00073
ORF1ab/nsp3110D110DgaTgaC11AY.950.000761
ORF1ab/nsp3110D110AgAtgCt11AY.980.000079
ORF1ab/nsp3110D110YGatTat11AY.98.10.000048
ORF1ab/nsp3110D110YGatTat11AY.99.20.000092
ORF1ab/nsp3110D110DgaTgaC11AY.99.20.000092
ORF1ab/nsp3110D110DgaTgaC11AZ.20.000821
ORF1ab/nsp3110D110NGatAat11AZ.20.000821
ORF1ab/nsp3110D110YGatTat11AZ.20.000821
ORF1ab/nsp3110D110NGatAat11B0.000128
ORF1ab/nsp3110D110HGatCat11B.10.000009
ORF1ab/nsp3110D110del1gAtg-t11B.10.000009
ORF1ab/nsp3110D110VgAtgTt11B.10.000009
ORF1ab/nsp3110D110NGatAat11B.1.10.000018
ORF1ab/nsp3110D110delGAT---11B.1.10.000018
ORF1ab/nsp3110D110YGatTat11B.1.1.1340.011364
ORF1ab/nsp3110D110DgaTgaC11B.1.1.1760.000439
ORF1ab/nsp3110D110YGatTat11B.1.1.2140.000055
ORF1ab/nsp3110D110EgaTgaG11B.1.1.2160.00089
ORF1ab/nsp3110D110EgaTgaA11B.1.1.2210.010101
ORF1ab/nsp3110D110AgAtgCt11B.1.1.2300.009174
ORF1ab/nsp3110D110YGatTat11B.1.1.250.000569
ORF1ab/nsp3110D110YGatTat11B.1.1.280.000311
ORF1ab/nsp3110D110GgAtgGt11B.1.1.3060.000438
ORF1ab/nsp3110D110DgaTgaC11B.1.1.3160.000925
ORF1ab/nsp3110D110NGatAat11B.1.1.3170.000412
ORF1ab/nsp3110D110YGatTat11B.1.1.3170.000412
ORF1ab/nsp3110D110YGatTat11B.1.1.3180.000302
ORF1ab/nsp3110D110VgAtgTt11B.1.1.330.000421
ORF1ab/nsp3110D110GgAtgGt11B.1.1.330.000421
ORF1ab/nsp3110D110YGatTat11B.1.1.330.000421
ORF1ab/nsp3110D110delGAT---11B.1.1.3690.000446
ORF1ab/nsp3110D110VgAtgTt11B.1.1.390.00051
ORF1ab/nsp3110D110EgaTgaA11B.1.1.390.00051
ORF1ab/nsp3110D110DgaTgaC11B.1.1.410.006329
ORF1ab/nsp3110D110YGatTat11B.1.1.4320.001266
ORF1ab/nsp3110D110GgAtgGt11B.1.1.4340.000349
ORF1ab/nsp3110D110DgaTgaC11B.1.1.4340.000349
ORF1ab/nsp3110D110YGatTat11B.1.1.4660.008696
ORF1ab/nsp3110D110GgAtgGt11B.1.1.5190.00004
ORF1ab/nsp3110D110DgaTgaC11B.1.1.5280.004808
ORF1ab/nsp3110D110HGatCat11B.1.1.70.000001
ORF1ab/nsp3110D110del2gATg--11B.1.1.70.000001
ORF1ab/nsp3110D110del1Gat-at11B.1.1.70.000001
ORF1ab/nsp3110D110GgAtgGt11B.1.1.700.000341
ORF1ab/nsp3110D110YGatTat11B.1.1110.001175
ORF1ab/nsp3110D110DgaTgaC11B.1.1260.001276
ORF1ab/nsp3110D110DgaTgaC11B.1.130.002375
ORF1ab/nsp3110D110VgAtgTt11B.1.1600.000031
ORF1ab/nsp3110D110HGatCat11B.1.1600.000031
ORF1ab/nsp3110D110DgaTgaC11B.1.160.320.004292
ORF1ab/nsp3110D110AgAtgCt11B.1.1770.000013
ORF1ab/nsp3110D110delGAT---11B.1.1770.000013
ORF1ab/nsp3110D110NGatAat11B.1.1770.000013
ORF1ab/nsp3110D110DgaTgaC11B.1.177.110.001698
ORF1ab/nsp3110D110DgaTgaC11B.1.177.160.000664
ORF1ab/nsp3110D110DgaTgaC11B.1.177.210.000076
ORF1ab/nsp3110D110YGatTat11B.1.177.440.000519
ORF1ab/nsp3110D110DgaTgaC11B.1.177.460.000918
ORF1ab/nsp3110D110DgaTgaC11B.1.177.500.004695
ORF1ab/nsp3110D110DgaTgaC11B.1.177.60.000977
ORF1ab/nsp3110D110HGatCat11B.1.177.600.000218
ORF1ab/nsp3110D110YGatTat11B.1.177.600.000218
ORF1ab/nsp3110D110VgAtgTt11B.1.20.000009
ORF1ab/nsp3110D110SGAtAGt11B.1.20.000009
ORF1ab/nsp3110D110AgAtgCt11B.1.20.000009
ORF1ab/nsp3110D110del1Gat-at11B.1.20.000009
ORF1ab/nsp3110D110YGatTat11B.1.214.20.0006
ORF1ab/nsp3110D110NGatAat11B.1.2210.000071
ORF1ab/nsp3110D110YGatTat11B.1.2400.000216
ORF1ab/nsp3110D110VgAtgTt11B.1.2400.000216
ORF1ab/nsp3110D110DgaTgaC11B.1.2430.00007
ORF1ab/nsp3110D110NGatAat11B.1.2580.000067
ORF1ab/nsp3110D110DgaTgaC11B.1.2580.000067
ORF1ab/nsp3110D110DgaTgaC11B.1.258.170.000104
ORF1ab/nsp3110D110EgaTgaG11B.1.258.170.000104
ORF1ab/nsp3110D110DgaTgaC11B.1.258.70.001912
ORF1ab/nsp3110D110AgAtgCt11B.1.2650.001271
ORF1ab/nsp3110D110NGatAat11B.1.2890.00266
ORF1ab/nsp3110D110YGatTat11B.1.2910.019231
ORF1ab/nsp3110D110YGatTat11B.1.3110.000275
ORF1ab/nsp3110D110DgaTgaC11B.1.3240.001605
ORF1ab/nsp3110D110delGAT---11B.1.3490.000715
ORF1ab/nsp3110D110NGatAat11B.1.3510.00003
ORF1ab/nsp3110D110GgAtgGt11B.1.351.20.000303
ORF1ab/nsp3110D110YGatTat11B.1.351.30.000876
ORF1ab/nsp3110D110GgAtgGt11B.1.360.000146
ORF1ab/nsp3110D110DgaTgaC11B.1.36.350.002604
ORF1ab/nsp3110D110EgaTgaG11B.1.36.380.001642
ORF1ab/nsp3110D110EgaTgaG11B.1.3610.001289
ORF1ab/nsp3110D110delGAT---11B.1.416.10.001563
ORF1ab/nsp3110D110EgaTgaG11B.1.4270.00005
ORF1ab/nsp3110D110delGAT---11B.1.4290.000024
ORF1ab/nsp3110D110EgaTgaG11B.1.4290.000024
ORF1ab/nsp3110D110DgaTgaC11B.1.429.10.012048
ORF1ab/nsp3110D110YGatTat11B.1.438.10.000107
ORF1ab/nsp3110D110YGatTat11B.1.4620.007246
ORF1ab/nsp3110D110DgaTgaC11B.1.466.20.000391
ORF1ab/nsp3110D110YGatTat11B.1.466.20.000391
ORF1ab/nsp3110D110GgAtgGt11B.1.466.20.000391
ORF1ab/nsp3110D110NGatAat11B.1.4700.001404
ORF1ab/nsp3110D110YGatTat11B.1.5030.002488
ORF1ab/nsp3110D110delGAT---11B.1.5250.000113
ORF1ab/nsp3110D110DgaTgaC11B.1.5250.000113
ORF1ab/nsp3110D110GgAtgGt11B.1.5300.007143
ORF1ab/nsp3110D110GgAtgGt11B.1.5610.000397
ORF1ab/nsp3110D110delGAT---11B.1.5610.000397
ORF1ab/nsp3110D110EgaTgaG11B.1.5610.000397
ORF1ab/nsp3110D110YGatTat11B.1.5610.000397
ORF1ab/nsp3110D110YGatTat11B.1.5630.016949
ORF1ab/nsp3110D110YGatTat11B.1.5750.000303
ORF1ab/nsp3110D110delGAT---11B.1.5770.000687
ORF1ab/nsp3110D110HGatCat11B.1.5960.000087
ORF1ab/nsp3110D110VgAtgTt11B.1.617.10.000129
ORF1ab/nsp3110D110delGAT---11B.1.617.20.000004
ORF1ab/nsp3110D110HGatCat11B.1.617.20.000004
ORF1ab/nsp3110D110GgAtgGt11B.1.619.10.000641
ORF1ab/nsp3110D110GgAtgGt11B.1.6230.000536
ORF1ab/nsp3110D110YGatTat11B.1.6260.005714
ORF1ab/nsp3110D110NGatAat11B.1.6370.000073
ORF1ab/nsp3110D110GgAtgGt11B.1.6370.000073
ORF1ab/nsp3110D110YGatTat11B.1.9.40.006135
ORF1ab/nsp3110D110DgaTgaC11B.310.003731
ORF1ab/nsp3110D110YGatTat11C.160.00106
ORF1ab/nsp3110D110GgAtgGt11C.260.007353
ORF1ab/nsp3110D110NGatAat11C.350.000774
ORF1ab/nsp3110D110EgaTgaG11C.350.000774
ORF1ab/nsp3110D110AgAtgCt11C.360.000911
ORF1ab/nsp3110D110DgaTgaC11C.36.3.10.002717
ORF1ab/nsp3110D110GgAtgGt11C.370.000116
ORF1ab/nsp3110D110NGatAat11C.370.000116
ORF1ab/nsp3110D110VgAtgTt11D.30.005917
ORF1ab/nsp3110D110delGAT---11P.10.000016
ORF1ab/nsp3110D110EgaTgaG11P.10.000016
ORF1ab/nsp3110D110YGatTat11P.1.10.000318
ORF1ab/nsp3110D110YGatTat11P.1.120.000484
ORF1ab/nsp3110D110YGatTat11P.1.20.001156
ORF1ab/nsp3110D110YGatTat11P.20.000187
ORF1ab/nsp3110D110DgaTgaC11P.20.000187
ORF1ab/nsp3110D110YGatTat11P.30.001595
ORF1ab/nsp3110D110YGatTat11Q.20.000613
ORF1ab/nsp3110D110YGatTat11Q.70.001111
ORF1ab/nsp3110D110AgAtgCt11R.10.00009
ORF1ab/nsp3110D110del1Gat-at11R.10.00009
ORF1ab/nsp3110D110AgAtgCt11W.30.005263