CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 108 & Codon = cTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp3108P108LP926LnonsyncCtcTt6146100.9934853041-3043

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp3108P108LcCtcTt610614All0.000117
ORF1ab/nsp3108P108LcCtcTt124124B.1.3360.302439
ORF1ab/nsp3108P108LcCtcTt108108AY.46.60.007798
ORF1ab/nsp3108P108LcCtcTt8686B.1.1.70.000077
ORF1ab/nsp3108P108LcCtcTt3434AY.1030.000211
ORF1ab/nsp3108P108LcCtcTt2121AY.40.000033
ORF1ab/nsp3108P108LcCtcTt2121B.1.617.20.000079
ORF1ab/nsp3108P108LcCtcTt1616AY.440.000097
ORF1ab/nsp3108P108LcCtcTt1414B.1.2340.001847
ORF1ab/nsp3108P108LcCtcTt1414B.1.6350.245614
ORF1ab/nsp3108P108LcCtcTt1313B.1.2580.000865
ORF1ab/nsp3108P108LcCtcTt1212AY.910.008766
ORF1ab/nsp3108P108LcCtcTt1212B.1.10.000218
ORF1ab/nsp3108P108LcCtcTt1010B.10.000092
ORF1ab/nsp3108P108LcCtcTt89AY.430.000035
ORF1ab/nsp3108P108LcCtcTt88B.1.1770.000105
ORF1ab/nsp3108P108LcCtcTt77B.1.4290.000165
ORF1ab/nsp3108P108LcCtcTt66B.1.1.1580.073171
ORF1ab/nsp3108P108LcCtcTt55AY.250.00003
ORF1ab/nsp3108P108LcCtcTt45AY.30.00004
ORF1ab/nsp3108P108LcCtcTt44AY.470.000124
ORF1ab/nsp3108P108LcCtcTt44B.1.1.3170.001647
ORF1ab/nsp3108P108LcCtcTt44B.1.3110.001098
ORF1ab/nsp3108P108LcCtcTt34D.20.000225
ORF1ab/nsp3108P108LcCtcTt33B.1.20.000026
ORF1ab/nsp3108P108LcCtcTt22AY.270.000129
ORF1ab/nsp3108P108LcCtcTt22AY.390.000049
ORF1ab/nsp3108P108LcCtcTt22AY.4.20.000043
ORF1ab/nsp3108P108LcCtcTt22AY.420.00008
ORF1ab/nsp3108P108LcCtcTt22AY.750.000112
ORF1ab/nsp3108P108LcCtcTt22AY.98.10.000097
ORF1ab/nsp3108P108LcCtcTt22B.1.1.2180.015385
ORF1ab/nsp3108P108LcCtcTt22B.1.1.2700.020619
ORF1ab/nsp3108P108LcCtcTt22B.1.1.3060.000877
ORF1ab/nsp3108P108LcCtcTt22B.1.1.5190.000079
ORF1ab/nsp3108P108LcCtcTt22B.1.258.170.000208
ORF1ab/nsp3108P108LcCtcTt22B.1.351.30.001753
ORF1ab/nsp3108P108LcCtcTt22B.1.36.180.00084
ORF1ab/nsp3108P108LcCtcTt22B.1.438.10.000215
ORF1ab/nsp3108P108LcCtcTt22B.1.5960.000174
ORF1ab/nsp3108P108LcCtcTt11A.20.000662
ORF1ab/nsp3108P108LcCtcTt11A.280.002646
ORF1ab/nsp3108P108LcCtcTt11AE.10.011364
ORF1ab/nsp3108P108LcCtcTt11AJ.10.045455
ORF1ab/nsp3108P108LcCtcTt11AY.1050.000643
ORF1ab/nsp3108P108LcCtcTt11AY.116.10.000311
ORF1ab/nsp3108P108LcCtcTt11AY.1170.000085
ORF1ab/nsp3108P108LcCtcTt11AY.130.000161
ORF1ab/nsp3108P108LcCtcTt11AY.140.000088
ORF1ab/nsp3108P108LcCtcTt11AY.16.10.00047
ORF1ab/nsp3108P108LcCtcTt11AY.200.000039
ORF1ab/nsp3108P108LcCtcTt11AY.360.000148
ORF1ab/nsp3108P108LcCtcTt11AY.60.000041
ORF1ab/nsp3108P108LcCtcTt11AY.610.000105
ORF1ab/nsp3108P108LcCtcTt11AY.620.000436
ORF1ab/nsp3108P108LcCtcTt11AY.670.000464
ORF1ab/nsp3108P108LcCtcTt11AY.690.000187
ORF1ab/nsp3108P108LcCtcTt11AY.860.00083
ORF1ab/nsp3108P108LcCtcTt11AY.980.000079
ORF1ab/nsp3108P108LcCtcTt11AY.990.001049
ORF1ab/nsp3108P108LcCtcTt11AY.99.20.000092
ORF1ab/nsp3108P108LcCtcTt11B.1.1.10.000327
ORF1ab/nsp3108P108LcCtcTt11B.1.1.1170.009709
ORF1ab/nsp3108P108LcCtcTt11B.1.1.2140.000055
ORF1ab/nsp3108P108LcCtcTt11B.1.1.2630.001558
ORF1ab/nsp3108P108LcCtcTt11B.1.1.2840.000107
ORF1ab/nsp3108P108LcCtcTt11B.1.1.2910.000742
ORF1ab/nsp3108P108LcCtcTt11B.1.1.2980.000862
ORF1ab/nsp3108P108LcCtcTt11B.1.1.500.000679
ORF1ab/nsp3108P108LcCtcTt11B.1.177.40.000211
ORF1ab/nsp3108P108LcCtcTt11B.1.177.870.000728
ORF1ab/nsp3108P108LcCtcTt11B.1.2210.000071
ORF1ab/nsp3108P108LcCtcTt11B.1.3240.001605
ORF1ab/nsp3108P108LcCtcTt11B.1.351.20.000303
ORF1ab/nsp3108P108LcCtcTt11B.1.3670.000792
ORF1ab/nsp3108P108LcCtcTt11B.1.5880.00091
ORF1ab/nsp3108P108LcCtcTt11B.1.6210.000089
ORF1ab/nsp3108P108LcCtcTt11B.400.000364
ORF1ab/nsp3108P108LcCtcTt11R.10.00009