CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1075

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31075D1075DD1893DsyngaCgaT748087480815942-5944
ORF1ab/nsp31075D1075ND1893NnonsynGacAac9779700.9928355942-5944
ORF1ab/nsp31075D1075ND1893NnonsynGaCAaT97770.007164795942-5944
ORF1ab/nsp31075D1075YD1893YnonsynGacTac54754715942-5944
ORF1ab/nsp31075D1075ED1893EnonsyngaCgaA1171160.9914535942-5944
ORF1ab/nsp31075D1075ED1893EnonsyngaCgaG11710.008547015942-5944
ORF1ab/nsp31075D1075delD1893deldelGAC---10810815942-5944
ORF1ab/nsp31075D1075GD1893GnonsyngAcgGc81750.9259265942-5944
ORF1ab/nsp31075D1075GD1893GnonsyngACgGT8150.06172845942-5944
ORF1ab/nsp31075D1075GD1893GnonsyngACgGA8110.01234575942-5944
ORF1ab/nsp31075D1075VD1893VnonsyngAcgTc252515942-5944
ORF1ab/nsp31075D1075AD1893AnonsyngAcgCc141415942-5944
ORF1ab/nsp31075D1075del1D1893del1delgaCga-980.8888895942-5944
ORF1ab/nsp31075D1075del1D1893del1delGAC-NN910.1111115942-5944
ORF1ab/nsp31075D1075HD1893HnonsynGacCac7715942-5944
ORF1ab/nsp31075D1075del2D1893del2delGAC--N430.755942-5944
ORF1ab/nsp31075D1075del2D1893del2delgACg--410.255942-5944
ORF1ab/nsp31075D1075XD1893XnonsynGaCTaA320.6666675942-5944
ORF1ab/nsp31075D1075XD1893XnonsynGACTGA310.3333335942-5944
ORF1ab/nsp31075D1075CD1893CnonsynGACTGT210.55942-5944
ORF1ab/nsp31075D1075CD1893CnonsynGAcTGc210.55942-5944
ORF1ab/nsp31075D1075LD1893LnonsynGACTTA1115942-5944
ORF1ab/nsp31075D1075PD1893PnonsynGAcCCc1115942-5944
ORF1ab/nsp31075D1075ID1893InonsynGAcATc1115942-5944

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31075D1075DgaCgaT7480874808All0.014308
ORF1ab/nsp31075D1075DgaCgaT7273272732B.1.1.70.065111
ORF1ab/nsp31075D1075NGacAac970977All0.000186
ORF1ab/nsp31075D1075NGaCAaT7977All0.000001
ORF1ab/nsp31075D1075DgaCgaT767767Q.70.852222
ORF1ab/nsp31075D1075NGacAac550550AY.40.000856
ORF1ab/nsp31075D1075YGacTac547547All0.000105
ORF1ab/nsp31075D1075YGacTac513513B.1.1.70.000459
ORF1ab/nsp31075D1075DgaCgaT186186B.1.1.3030.513812
ORF1ab/nsp31075D1075DgaCgaT169169B.1.3510.005024
ORF1ab/nsp31075D1075EgaCgaA116117All0.000022
ORF1ab/nsp31075D1075EgaCgaG1117All0
ORF1ab/nsp31075D1075DgaCgaT110110B.1.5260.002585
ORF1ab/nsp31075D1075delGAC---108108All0.000021
ORF1ab/nsp31075D1075NGacAac98105B.1.1.70.000088
ORF1ab/nsp31075D1075NGaCAaT7105B.1.1.70.000006
ORF1ab/nsp31075D1075DgaCgaT9292B.1.177.180.106729
ORF1ab/nsp31075D1075DgaCgaT9090AY.40.00014
ORF1ab/nsp31075D1075GgAcgGc7581All0.000014
ORF1ab/nsp31075D1075GgACgGT581All0.000001
ORF1ab/nsp31075D1075GgACgGA181All0
ORF1ab/nsp31075D1075NGacAac7171AY.99.20.006543
ORF1ab/nsp31075D1075delGAC---7070B.1.1.70.000063
ORF1ab/nsp31075D1075DgaCgaT6666Q.10.008338
ORF1ab/nsp31075D1075DgaCgaT5858B.1.10.001052
ORF1ab/nsp31075D1075EgaCgaA5151AY.1030.000317
ORF1ab/nsp31075D1075DgaCgaT4949B.1.617.20.000185
ORF1ab/nsp31075D1075DgaCgaT4141AY.1030.000255
ORF1ab/nsp31075D1075NGacAac4141B.1.221.40.170833
ORF1ab/nsp31075D1075DgaCgaT3737AY.540.003528
ORF1ab/nsp31075D1075DgaCgaT3333AY.1130.004699
ORF1ab/nsp31075D1075NGacAac3333AY.430.000146
ORF1ab/nsp31075D1075DgaCgaT3232B.10.000293
ORF1ab/nsp31075D1075NGacAac2929AY.440.000177
ORF1ab/nsp31075D1075DgaCgaT2828P.10.000441
ORF1ab/nsp31075D1075DgaCgaT2626B.1.4290.000612
ORF1ab/nsp31075D1075VgAcgTc2525All0.000005
ORF1ab/nsp31075D1075DgaCgaT2222AY.430.000097
ORF1ab/nsp31075D1075NGacAac1818AY.1200.000669
ORF1ab/nsp31075D1075GgAcgGc1717AY.1020.000451
ORF1ab/nsp31075D1075VgAcgTc1717B.1.1.70.000015
ORF1ab/nsp31075D1075NGacAac1717B.1.617.20.000064
ORF1ab/nsp31075D1075EgaCgaA1616B.1.1.70.000014
ORF1ab/nsp31075D1075DgaCgaT1515B.1.177.150.009464
ORF1ab/nsp31075D1075AgAcgCc1414All0.000003
ORF1ab/nsp31075D1075DgaCgaT1414AY.250.000084
ORF1ab/nsp31075D1075DgaCgaT1414Q.80.002309
ORF1ab/nsp31075D1075DgaCgaT1313B.1.1.5190.000516
ORF1ab/nsp31075D1075GgAcgGc1313W.40.017568
ORF1ab/nsp31075D1075DgaCgaT1212B.1.2430.000835
ORF1ab/nsp31075D1075GgAcgGc1111B.1.617.20.000041
ORF1ab/nsp31075D1075NGacAac1010B.1.5250.001132
ORF1ab/nsp31075D1075del1gaCga-89All0.000002
ORF1ab/nsp31075D1075del1GAC-NN19All0
ORF1ab/nsp31075D1075DgaCgaT99AY.290.000142
ORF1ab/nsp31075D1075YGacTac99B.1.10.000163
ORF1ab/nsp31075D1075EgaCgaA99B.1.617.20.000034
ORF1ab/nsp31075D1075DgaCgaT88AY.1200.000297
ORF1ab/nsp31075D1075DgaCgaT88AY.160.003037
ORF1ab/nsp31075D1075NGacAac88AY.250.000048
ORF1ab/nsp31075D1075delGAC---88B.1.10.000145
ORF1ab/nsp31075D1075DgaCgaT88B.1.20.00007
ORF1ab/nsp31075D1075DgaCgaT88B.1.2010.045455
ORF1ab/nsp31075D1075HGacCac77All0.000001
ORF1ab/nsp31075D1075NGacAac77AY.1030.000043
ORF1ab/nsp31075D1075DgaCgaT77AY.1190.000247
ORF1ab/nsp31075D1075DgaCgaT77AY.230.000488
ORF1ab/nsp31075D1075NGacAac77B.1.20.000062
ORF1ab/nsp31075D1075EgaCgaA66AY.30.00006
ORF1ab/nsp31075D1075DgaCgaT66AY.440.000037
ORF1ab/nsp31075D1075DgaCgaT66B.1.1770.000079
ORF1ab/nsp31075D1075DgaCgaT55AY.200.000194
ORF1ab/nsp31075D1075NGacAac55AY.260.000142
ORF1ab/nsp31075D1075DgaCgaT55AY.270.000324
ORF1ab/nsp31075D1075DgaCgaT55AY.30.00005
ORF1ab/nsp31075D1075NGacAac55AY.390.000124
ORF1ab/nsp31075D1075EgaCgaA55AY.40.000008
ORF1ab/nsp31075D1075DgaCgaT55AY.420.000201
ORF1ab/nsp31075D1075EgaCgaA55AY.430.000022
ORF1ab/nsp31075D1075NGacAac55B.10.000046
ORF1ab/nsp31075D1075NGacAac55B.1.1.5190.000199
ORF1ab/nsp31075D1075GgACgGT45B.1.1.70.000004
ORF1ab/nsp31075D1075GgAcgGc15B.1.1.70.000001
ORF1ab/nsp31075D1075DgaCgaT55B.1.4270.000252
ORF1ab/nsp31075D1075NGacAac55P.20.000933
ORF1ab/nsp31075D1075NGacAac44A.23.10.002817
ORF1ab/nsp31075D1075del2GAC--N34All0.000001
ORF1ab/nsp31075D1075del2gACg--14All0
ORF1ab/nsp31075D1075DgaCgaT44AY.1000.000184
ORF1ab/nsp31075D1075NGacAac44AY.30.00004
ORF1ab/nsp31075D1075GgAcgGc44AY.4.20.000087
ORF1ab/nsp31075D1075EgaCgaA44B.10.000037
ORF1ab/nsp31075D1075YGacTac44B.10.000037
ORF1ab/nsp31075D1075DgaCgaT44B.1.2580.000266
ORF1ab/nsp31075D1075NGacAac44B.1.258.140.003922
ORF1ab/nsp31075D1075DgaCgaT44B.1.5960.000349
ORF1ab/nsp31075D1075DgaCgaT44C.36.30.002269
ORF1ab/nsp31075D1075DgaCgaT44Q.40.001819
ORF1ab/nsp31075D1075XGaCTaA23All0
ORF1ab/nsp31075D1075XGACTGA13All0
ORF1ab/nsp31075D1075GgAcgGc33AY.250.000018
ORF1ab/nsp31075D1075NGacAac33AY.380.001498
ORF1ab/nsp31075D1075GgAcgGc33AY.40.000005
ORF1ab/nsp31075D1075YGacTac33AY.40.000005
ORF1ab/nsp31075D1075delGAC---33AY.40.000005
ORF1ab/nsp31075D1075DgaCgaT33AY.4.20.000065
ORF1ab/nsp31075D1075DgaCgaT33AY.450.000365
ORF1ab/nsp31075D1075DgaCgaT33AY.50.000062
ORF1ab/nsp31075D1075EgaCgaA33AY.98.10.000145
ORF1ab/nsp31075D1075delGAC---33AZ.20.002463
ORF1ab/nsp31075D1075DgaCgaT33B0.000383
ORF1ab/nsp31075D1075DgaCgaT33B.1.1600.000094
ORF1ab/nsp31075D1075NGacAac33B.1.177.860.00055
ORF1ab/nsp31075D1075AgAcgCc33B.1.20.000026
ORF1ab/nsp31075D1075GgAcgGc33B.1.20.000026
ORF1ab/nsp31075D1075YGacTac33B.1.617.20.000011
ORF1ab/nsp31075D1075DgaCgaT33C.370.000348
ORF1ab/nsp31075D1075DgaCgaT33P.1.140.000143
ORF1ab/nsp31075D1075CGACTGT12All0
ORF1ab/nsp31075D1075CGAcTGc12All0
ORF1ab/nsp31075D1075EgaCgaA22AY.1000.000092
ORF1ab/nsp31075D1075NGacAac22AY.230.000139
ORF1ab/nsp31075D1075EgaCgaA22AY.290.000032
ORF1ab/nsp31075D1075DgaCgaT22AY.340.000194
ORF1ab/nsp31075D1075DgaCgaT22AY.390.000049
ORF1ab/nsp31075D1075AgAcgCc22AY.40.000003
ORF1ab/nsp31075D1075GgAcgGc22AY.430.000009
ORF1ab/nsp31075D1075GgAcgGc22AY.440.000012
ORF1ab/nsp31075D1075del1gaCga-22AY.440.000012
ORF1ab/nsp31075D1075EgaCgaA22AY.460.000208
ORF1ab/nsp31075D1075NGacAac22AY.50.000041
ORF1ab/nsp31075D1075DgaCgaT22AY.5.40.000553
ORF1ab/nsp31075D1075GgAcgGc22AY.500.001599
ORF1ab/nsp31075D1075DgaCgaT22AY.60.000082
ORF1ab/nsp31075D1075DgaCgaT22AY.7.10.000225
ORF1ab/nsp31075D1075DgaCgaT22AY.90.000135
ORF1ab/nsp31075D1075DgaCgaT22AY.98.10.000097
ORF1ab/nsp31075D1075DgaCgaT22AY.99.20.000184
ORF1ab/nsp31075D1075delGAC---22B.10.000018
ORF1ab/nsp31075D1075EgaCgaA22B.1.10.000036
ORF1ab/nsp31075D1075NGacAac22B.1.10.000036
ORF1ab/nsp31075D1075DgaCgaT22B.1.1.3690.000892
ORF1ab/nsp31075D1075NGacAac22B.1.1.5170.013605
ORF1ab/nsp31075D1075NGacAac22B.1.1.5210.010695
ORF1ab/nsp31075D1075HGacCac22B.1.1.70.000002
ORF1ab/nsp31075D1075del2GAC--N22B.1.1.70.000002
ORF1ab/nsp31075D1075DgaCgaT22B.1.1.710.012121
ORF1ab/nsp31075D1075delGAC---22B.1.1770.000026
ORF1ab/nsp31075D1075DgaCgaT22B.1.177.730.001133
ORF1ab/nsp31075D1075YGacTac22B.1.3510.000059
ORF1ab/nsp31075D1075NGacAac22B.1.3510.000059
ORF1ab/nsp31075D1075NGacAac22B.1.360.000292
ORF1ab/nsp31075D1075DgaCgaT22B.1.3750.001639
ORF1ab/nsp31075D1075NGacAac22B.1.575.10.004878
ORF1ab/nsp31075D1075GgAcgGc12C.60.037037
ORF1ab/nsp31075D1075GgACgGA12C.60.037037
ORF1ab/nsp31075D1075XGACTGA12C.60.037037
ORF1ab/nsp31075D1075XGaCTaA12C.60.037037
ORF1ab/nsp31075D1075NGacAac22P.1.140.000096
ORF1ab/nsp31075D1075DgaCgaT22P.1.70.000639
ORF1ab/nsp31075D1075delGAC---11AD.20.000219
ORF1ab/nsp31075D1075IGAcATc11All0
ORF1ab/nsp31075D1075LGACTTA11All0
ORF1ab/nsp31075D1075PGAcCCc11All0
ORF1ab/nsp31075D1075NGacAac11AU.20.002421
ORF1ab/nsp31075D1075HGacCac11AU.30.00211
ORF1ab/nsp31075D1075GgAcgGc11AY.1000.000046
ORF1ab/nsp31075D1075NGacAac11AY.1000.000046
ORF1ab/nsp31075D1075DgaCgaT11AY.1020.000027
ORF1ab/nsp31075D1075HGacCac11AY.1030.000006
ORF1ab/nsp31075D1075del1gaCga-11AY.1030.000006
ORF1ab/nsp31075D1075AgAcgCc11AY.1030.000006
ORF1ab/nsp31075D1075delGAC---11AY.1030.000006
ORF1ab/nsp31075D1075DgaCgaT11AY.1070.000466
ORF1ab/nsp31075D1075GgAcgGc11AY.1130.000142
ORF1ab/nsp31075D1075DgaCgaT11AY.1160.000287
ORF1ab/nsp31075D1075GgAcgGc11AY.1200.000037
ORF1ab/nsp31075D1075EgaCgaG11AY.130.000161
ORF1ab/nsp31075D1075NGacAac11AY.200.000039
ORF1ab/nsp31075D1075GgAcgGc11AY.230.00007
ORF1ab/nsp31075D1075YGacTac11AY.250.000006
ORF1ab/nsp31075D1075EgaCgaA11AY.250.000006
ORF1ab/nsp31075D1075EgaCgaA11AY.260.000028
ORF1ab/nsp31075D1075DgaCgaT11AY.260.000028
ORF1ab/nsp31075D1075VgAcgTc11AY.290.000016
ORF1ab/nsp31075D1075delGAC---11AY.290.000016
ORF1ab/nsp31075D1075NGacAac11AY.330.000067
ORF1ab/nsp31075D1075GgAcgGc11AY.330.000067
ORF1ab/nsp31075D1075delGAC---11AY.360.000148
ORF1ab/nsp31075D1075EgaCgaA11AY.390.000025
ORF1ab/nsp31075D1075GgAcgGc11AY.390.000025
ORF1ab/nsp31075D1075VgAcgTc11AY.40.000002
ORF1ab/nsp31075D1075del2gACg--11AY.40.000002
ORF1ab/nsp31075D1075AgAcgCc11AY.4.20.000022
ORF1ab/nsp31075D1075HGacCac11AY.4.20.000022
ORF1ab/nsp31075D1075delGAC---11AY.4.30.000842
ORF1ab/nsp31075D1075DgaCgaT11AY.4.50.000107
ORF1ab/nsp31075D1075EgaCgaA11AY.420.00004
ORF1ab/nsp31075D1075delGAC---11AY.430.000004
ORF1ab/nsp31075D1075delGAC---11AY.440.000006
ORF1ab/nsp31075D1075DgaCgaT11AY.46.40.000165
ORF1ab/nsp31075D1075DgaCgaT11AY.46.60.000072
ORF1ab/nsp31075D1075NGacAac11AY.46.60.000072
ORF1ab/nsp31075D1075YGacTac11AY.50.000021
ORF1ab/nsp31075D1075delGAC---11AY.5.30.000337
ORF1ab/nsp31075D1075NGacAac11AY.5.30.000337
ORF1ab/nsp31075D1075NGacAac11AY.510.000909
ORF1ab/nsp31075D1075DgaCgaT11AY.530.000288
ORF1ab/nsp31075D1075delGAC---11AY.610.000105
ORF1ab/nsp31075D1075YGacTac11AY.640.000595
ORF1ab/nsp31075D1075NGacAac11AY.670.000464
ORF1ab/nsp31075D1075delGAC---11AY.670.000464
ORF1ab/nsp31075D1075GgAcgGc11AY.740.000116
ORF1ab/nsp31075D1075DgaCgaT11AY.740.000116
ORF1ab/nsp31075D1075NGacAac11AY.740.000116
ORF1ab/nsp31075D1075delGAC---11AY.750.000056
ORF1ab/nsp31075D1075DgaCgaT11AY.80.000606
ORF1ab/nsp31075D1075DgaCgaT11AY.820.001357
ORF1ab/nsp31075D1075delGAC---11AY.850.000427
ORF1ab/nsp31075D1075DgaCgaT11AY.850.000427
ORF1ab/nsp31075D1075DgaCgaT11AY.880.000884
ORF1ab/nsp31075D1075YGacTac11AY.980.000079
ORF1ab/nsp31075D1075DgaCgaT11AY.980.000079
ORF1ab/nsp31075D1075NGacAac11AY.980.000079
ORF1ab/nsp31075D1075NGacAac11AY.990.001049
ORF1ab/nsp31075D1075del2GAC--N11AZ.20.000821
ORF1ab/nsp31075D1075YGacTac11B0.000128
ORF1ab/nsp31075D1075AgAcgCc11B.10.000009
ORF1ab/nsp31075D1075VgAcgTc11B.10.000009
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.1610.003534
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.1760.000439
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.2140.000055
ORF1ab/nsp31075D1075EgaCgaA11B.1.1.2140.000055
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.2160.00089
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.2370.005405
ORF1ab/nsp31075D1075del1GAC-NN11B.1.1.2770.000759
ORF1ab/nsp31075D1075VgAcgTc11B.1.1.2790.001121
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.3070.002532
ORF1ab/nsp31075D1075NGacAac11B.1.1.3110.000358
ORF1ab/nsp31075D1075delGAC---11B.1.1.3180.000302
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.4090.002833
ORF1ab/nsp31075D1075VgAcgTc11B.1.1.4090.002833
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.4480.002033
ORF1ab/nsp31075D1075DgaCgaT11B.1.1.5210.005348
ORF1ab/nsp31075D1075DgaCgaT11B.1.1200.007692
ORF1ab/nsp31075D1075YGacTac11B.1.1770.000013
ORF1ab/nsp31075D1075delGAC---11B.1.177.320.00135
ORF1ab/nsp31075D1075AgAcgCc11B.1.177.330.001645
ORF1ab/nsp31075D1075NGacAac11B.1.177.330.001645
ORF1ab/nsp31075D1075delGAC---11B.1.177.730.000566
ORF1ab/nsp31075D1075CGACTGT11B.1.20.000009
ORF1ab/nsp31075D1075YGacTac11B.1.20.000009
ORF1ab/nsp31075D1075del1gaCga-11B.1.20.000009
ORF1ab/nsp31075D1075YGacTac11B.1.2210.000071
ORF1ab/nsp31075D1075DgaCgaT11B.1.2340.000132
ORF1ab/nsp31075D1075delGAC---11B.1.2580.000067
ORF1ab/nsp31075D1075GgACgGT11B.1.2580.000067
ORF1ab/nsp31075D1075DgaCgaT11B.1.2800.007143
ORF1ab/nsp31075D1075NGacAac11B.1.3060.005714
ORF1ab/nsp31075D1075delGAC---11B.1.3510.00003
ORF1ab/nsp31075D1075DgaCgaT11B.1.36.70.004
ORF1ab/nsp31075D1075DgaCgaT11B.1.3660.004878
ORF1ab/nsp31075D1075NGacAac11B.1.3670.000792
ORF1ab/nsp31075D1075YGacTac11B.1.3690.000285
ORF1ab/nsp31075D1075del1gaCga-11B.1.3770.004566
ORF1ab/nsp31075D1075DgaCgaT11B.1.3960.000706
ORF1ab/nsp31075D1075GgAcgGc11B.1.4290.000024
ORF1ab/nsp31075D1075NGacAac11B.1.4290.000024
ORF1ab/nsp31075D1075AgAcgCc11B.1.4290.000024
ORF1ab/nsp31075D1075EgaCgaA11B.1.4290.000024
ORF1ab/nsp31075D1075GgAcgGc11B.1.438.10.000107
ORF1ab/nsp31075D1075DgaCgaT11B.1.466.20.000391
ORF1ab/nsp31075D1075DgaCgaT11B.1.5010.007353
ORF1ab/nsp31075D1075AgAcgCc11B.1.5150.014493
ORF1ab/nsp31075D1075del1gaCga-11B.1.5210.004975
ORF1ab/nsp31075D1075EgaCgaA11B.1.5250.000113
ORF1ab/nsp31075D1075YGacTac11B.1.5260.000024
ORF1ab/nsp31075D1075NGacAac11B.1.5260.000024
ORF1ab/nsp31075D1075DgaCgaT11B.1.5400.009709
ORF1ab/nsp31075D1075DgaCgaT11B.1.5510.00129
ORF1ab/nsp31075D1075DgaCgaT11B.1.5750.000303
ORF1ab/nsp31075D1075DgaCgaT11B.1.5760.000907
ORF1ab/nsp31075D1075XGaCTaA11B.1.5770.000687
ORF1ab/nsp31075D1075LGACTTA11B.1.5770.000687
ORF1ab/nsp31075D1075AgAcgCc11B.1.5810.009434
ORF1ab/nsp31075D1075YGacTac11B.1.5820.000491
ORF1ab/nsp31075D1075YGacTac11B.1.5960.000087
ORF1ab/nsp31075D1075VgAcgTc11B.1.617.10.000129
ORF1ab/nsp31075D1075del1gaCga-11B.1.617.20.000004
ORF1ab/nsp31075D1075VgAcgTc11B.1.617.20.000004
ORF1ab/nsp31075D1075AgAcgCc11B.1.617.20.000004
ORF1ab/nsp31075D1075delGAC---11B.1.617.20.000004
ORF1ab/nsp31075D1075HGacCac11B.1.6200.000946
ORF1ab/nsp31075D1075DgaCgaT11B.1.6200.000946
ORF1ab/nsp31075D1075GgAcgGc11B.1.6210.000089
ORF1ab/nsp31075D1075DgaCgaT11B.1.6280.000352
ORF1ab/nsp31075D1075del1gaCga-11B.1.6330.041667
ORF1ab/nsp31075D1075HGacCac11B.1.930.000934
ORF1ab/nsp31075D1075PGAcCCc11B.1.930.000934
ORF1ab/nsp31075D1075AgAcgCc11B.1.930.000934
ORF1ab/nsp31075D1075delGAC---11B.150.017544
ORF1ab/nsp31075D1075GgAcgGc11B.230.002924
ORF1ab/nsp31075D1075DgaCgaT11B.610.005747
ORF1ab/nsp31075D1075VgAcgTc11C.350.000774
ORF1ab/nsp31075D1075NGacAac11C.370.000116
ORF1ab/nsp31075D1075EgaCgaA11C.60.037037
ORF1ab/nsp31075D1075YGacTac11C.60.037037
ORF1ab/nsp31075D1075CGAcTGc11C.60.037037
ORF1ab/nsp31075D1075GgAcgGc11D.20.000075
ORF1ab/nsp31075D1075NGacAac11D.20.000075
ORF1ab/nsp31075D1075DgaCgaT11D.20.000075
ORF1ab/nsp31075D1075delGAC---11P.10.000016
ORF1ab/nsp31075D1075GgAcgGc11P.10.000016
ORF1ab/nsp31075D1075EgaCgaA11P.10.000016
ORF1ab/nsp31075D1075DgaCgaT11P.1.10.000318
ORF1ab/nsp31075D1075IGAcATc11P.1.170.000162
ORF1ab/nsp31075D1075DgaCgaT11P.1.60.001946
ORF1ab/nsp31075D1075DgaCgaT11P.20.000187
ORF1ab/nsp31075D1075NGacAac11Q.10.000126

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.