CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1050 & Codon = Cac

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31050Y1050HY1868HnonsynTacCac10810815867-5869

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31050Y1050HTacCac108108All0.000021
ORF1ab/nsp31050Y1050HTacCac2727B.1.1600.000842
ORF1ab/nsp31050Y1050HTacCac1212B.1.1.70.000011
ORF1ab/nsp31050Y1050HTacCac99AY.90.000608
ORF1ab/nsp31050Y1050HTacCac66AY.40.000009
ORF1ab/nsp31050Y1050HTacCac55AY.430.000022
ORF1ab/nsp31050Y1050HTacCac44AY.1030.000025
ORF1ab/nsp31050Y1050HTacCac44B0.000511
ORF1ab/nsp31050Y1050HTacCac44B.10.000037
ORF1ab/nsp31050Y1050HTacCac44B.1.20.000035
ORF1ab/nsp31050Y1050HTacCac33AY.460.000312
ORF1ab/nsp31050Y1050HTacCac33B.1.617.20.000011
ORF1ab/nsp31050Y1050HTacCac22B.1.1770.000026
ORF1ab/nsp31050Y1050HTacCac22P.1.150.000465
ORF1ab/nsp31050Y1050HTacCac110.055556
ORF1ab/nsp31050Y1050HTacCac11AU.10.001266
ORF1ab/nsp31050Y1050HTacCac11AY.100.00053
ORF1ab/nsp31050Y1050HTacCac11AY.1000.000046
ORF1ab/nsp31050Y1050HTacCac11AY.120.000316
ORF1ab/nsp31050Y1050HTacCac11AY.200.000039
ORF1ab/nsp31050Y1050HTacCac11AY.250.000006
ORF1ab/nsp31050Y1050HTacCac11AY.390.000025
ORF1ab/nsp31050Y1050HTacCac11AY.4.20.000022
ORF1ab/nsp31050Y1050HTacCac11AY.420.00004
ORF1ab/nsp31050Y1050HTacCac11B.1.1.1320.014925
ORF1ab/nsp31050Y1050HTacCac11B.1.1.390.00051
ORF1ab/nsp31050Y1050HTacCac11B.1.1.630.000386
ORF1ab/nsp31050Y1050HTacCac11B.1.177.100.000878
ORF1ab/nsp31050Y1050HTacCac11B.1.3510.00003
ORF1ab/nsp31050Y1050HTacCac11B.1.3770.004566
ORF1ab/nsp31050Y1050HTacCac11B.1.4590.004082
ORF1ab/nsp31050Y1050HTacCac11B.1.5250.000113
ORF1ab/nsp31050Y1050HTacCac11B.1.5650.00081
ORF1ab/nsp31050Y1050HTacCac11B.4.50.011905
ORF1ab/nsp31050Y1050HTacCac11B.550.00295
ORF1ab/nsp31050Y1050HTacCac11D.20.000075
ORF1ab/nsp31050Y1050HTacCac11P.1.60.001946