CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1036 & Codon = aTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31036T1036IT1854InonsynaCaaTa8242824215825-5827

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31036T1036IaCaaTa82428242All0.001576
ORF1ab/nsp31036T1036IaCaaTa14521452B.1.1.70.0013
ORF1ab/nsp31036T1036IaCaaTa970970AY.40.00151
ORF1ab/nsp31036T1036IaCaaTa585585AY.430.002592
ORF1ab/nsp31036T1036IaCaaTa429429B.1.617.20.001615
ORF1ab/nsp31036T1036IaCaaTa325325P.10.00512
ORF1ab/nsp31036T1036IaCaaTa302302B.1.1.2140.016748
ORF1ab/nsp31036T1036IaCaaTa270270B.1.20.002377
ORF1ab/nsp31036T1036IaCaaTa218218AY.1030.001354
ORF1ab/nsp31036T1036IaCaaTa188188B.10.001722
ORF1ab/nsp31036T1036IaCaaTa180180AY.1020.004773
ORF1ab/nsp31036T1036IaCaaTa165165AY.440.001004
ORF1ab/nsp31036T1036IaCaaTa154154AY.230.010741
ORF1ab/nsp31036T1036IaCaaTa135135AY.250.000812
ORF1ab/nsp31036T1036IaCaaTa105105AY.30.001044
ORF1ab/nsp31036T1036IaCaaTa104104B.1.1600.003244
ORF1ab/nsp31036T1036IaCaaTa101101B.1.1770.00133
ORF1ab/nsp31036T1036IaCaaTa9898B.1.10.001778
ORF1ab/nsp31036T1036IaCaaTa9595AY.390.002348
ORF1ab/nsp31036T1036IaCaaTa8484B.1.1.2840.009022
ORF1ab/nsp31036T1036IaCaaTa7171AY.4.20.00154
ORF1ab/nsp31036T1036IaCaaTa6868B.1.160.200.607143
ORF1ab/nsp31036T1036IaCaaTa6666D.20.004953
ORF1ab/nsp31036T1036IaCaaTa5757B.1.2650.072427
ORF1ab/nsp31036T1036IaCaaTa5555AY.290.000868
ORF1ab/nsp31036T1036IaCaaTa5353AY.1190.001871
ORF1ab/nsp31036T1036IaCaaTa5151AY.330.003406
ORF1ab/nsp31036T1036IaCaaTa5151C.370.005919
ORF1ab/nsp31036T1036IaCaaTa5050B.1.1.2220.0102
ORF1ab/nsp31036T1036IaCaaTa4848B.520.484848
ORF1ab/nsp31036T1036IaCaaTa4545B.1.4290.001059
ORF1ab/nsp31036T1036IaCaaTa4242P.1.10.013342
ORF1ab/nsp31036T1036IaCaaTa4040B.1.177.810.007573
ORF1ab/nsp31036T1036IaCaaTa3939AY.1180.002443
ORF1ab/nsp31036T1036IaCaaTa3939B.1.3510.001159
ORF1ab/nsp31036T1036IaCaaTa3737AY.1200.001376
ORF1ab/nsp31036T1036IaCaaTa3737B.1.2210.002628
ORF1ab/nsp31036T1036IaCaaTa3737R.10.00333
ORF1ab/nsp31036T1036IaCaaTa3333AY.50.000681
ORF1ab/nsp31036T1036IaCaaTa3333AY.9.20.001212
ORF1ab/nsp31036T1036IaCaaTa3333B.1.5260.000776
ORF1ab/nsp31036T1036IaCaaTa3131AY.46.40.0051
ORF1ab/nsp31036T1036IaCaaTa3030AY.260.000849
ORF1ab/nsp31036T1036IaCaaTa2929B.1.5510.037419
ORF1ab/nsp31036T1036IaCaaTa2828B.1.258.170.002911
ORF1ab/nsp31036T1036IaCaaTa2727B.1.177.40.005699
ORF1ab/nsp31036T1036IaCaaTa2525AY.1000.00115
ORF1ab/nsp31036T1036IaCaaTa2424AY.1110.004396
ORF1ab/nsp31036T1036IaCaaTa2424B.1.177.160.015947
ORF1ab/nsp31036T1036IaCaaTa2222P.20.004106
ORF1ab/nsp31036T1036IaCaaTa2121B.1.2410.017045
ORF1ab/nsp31036T1036IaCaaTa2121P.1.140.001004
ORF1ab/nsp31036T1036IaCaaTa2020B.1.4270.00101
ORF1ab/nsp31036T1036IaCaaTa1818AY.1210.002436
ORF1ab/nsp31036T1036IaCaaTa1818AY.420.000724
ORF1ab/nsp31036T1036IaCaaTa1818AY.470.00056
ORF1ab/nsp31036T1036IaCaaTa1818B.1.1.3170.00741
ORF1ab/nsp31036T1036IaCaaTa1717AY.70.003332
ORF1ab/nsp31036T1036IaCaaTa1616AY.460.001665
ORF1ab/nsp31036T1036IaCaaTa1616B.1.2340.002111
ORF1ab/nsp31036T1036IaCaaTa1515AY.370.004741
ORF1ab/nsp31036T1036IaCaaTa1515B.1.5960.001307
ORF1ab/nsp31036T1036IaCaaTa1414B.1.6210.001239
ORF1ab/nsp31036T1036IaCaaTa1414P.1.120.006776
ORF1ab/nsp31036T1036IaCaaTa1313B.1.1.3060.005699
ORF1ab/nsp31036T1036IaCaaTa1313B.1.2270.619048
ORF1ab/nsp31036T1036IaCaaTa1212AY.1090.008876
ORF1ab/nsp31036T1036IaCaaTa1212AY.3.10.001023
ORF1ab/nsp31036T1036IaCaaTa1212AY.380.005991
ORF1ab/nsp31036T1036IaCaaTa1212AY.60.000494
ORF1ab/nsp31036T1036IaCaaTa1111AY.1130.001566
ORF1ab/nsp31036T1036IaCaaTa1111AY.1170.00093
ORF1ab/nsp31036T1036IaCaaTa1111AY.200.000428
ORF1ab/nsp31036T1036IaCaaTa1111AY.340.001067
ORF1ab/nsp31036T1036IaCaaTa1111B.1.2430.000765
ORF1ab/nsp31036T1036IaCaaTa1111B.1.2580.000732
ORF1ab/nsp31036T1036IaCaaTa1111B.1.3400.04721
ORF1ab/nsp31036T1036IaCaaTa1010AY.34.10.005099
ORF1ab/nsp31036T1036IaCaaTa1010AY.39.10.000396
ORF1ab/nsp31036T1036IaCaaTa1010AY.570.006562
ORF1ab/nsp31036T1036IaCaaTa1010B.1.5320.062112
ORF1ab/nsp31036T1036IaCaaTa99AY.450.001095
ORF1ab/nsp31036T1036IaCaaTa99AY.99.20.000829
ORF1ab/nsp31036T1036IaCaaTa99B.1.36.290.004656
ORF1ab/nsp31036T1036IaCaaTa99B.1.5250.001018
ORF1ab/nsp31036T1036IaCaaTa99B.400.003279
ORF1ab/nsp31036T1036IaCaaTa88AY.1100.000902
ORF1ab/nsp31036T1036IaCaaTa88AY.160.003037
ORF1ab/nsp31036T1036IaCaaTa88AY.46.60.000578
ORF1ab/nsp31036T1036IaCaaTa88AY.640.004762
ORF1ab/nsp31036T1036IaCaaTa88AY.75.10.001442
ORF1ab/nsp31036T1036IaCaaTa88AY.98.10.000387
ORF1ab/nsp31036T1036IaCaaTa77AY.4.2.10.001043
ORF1ab/nsp31036T1036IaCaaTa77AY.90.000473
ORF1ab/nsp31036T1036IaCaaTa77AY.990.007345
ORF1ab/nsp31036T1036IaCaaTa77B.1.1.2990.085366
ORF1ab/nsp31036T1036IaCaaTa77B.1.1.390.003568
ORF1ab/nsp31036T1036IaCaaTa77B.1.1.900.7
ORF1ab/nsp31036T1036IaCaaTa66AY.1160.001721
ORF1ab/nsp31036T1036IaCaaTa66AY.240.002586
ORF1ab/nsp31036T1036IaCaaTa66AY.270.000388
ORF1ab/nsp31036T1036IaCaaTa66AY.840.002625
ORF1ab/nsp31036T1036IaCaaTa66AY.850.002563
ORF1ab/nsp31036T1036IaCaaTa66AY.920.001724
ORF1ab/nsp31036T1036IaCaaTa66AY.980.000474
ORF1ab/nsp31036T1036IaCaaTa66B0.000767
ORF1ab/nsp31036T1036IaCaaTa66B.1.177.70.000989
ORF1ab/nsp31036T1036IaCaaTa66B.1.3050.012903
ORF1ab/nsp31036T1036IaCaaTa66B.1.3110.001647
ORF1ab/nsp31036T1036IaCaaTa66B.1.5850.166667
ORF1ab/nsp31036T1036IaCaaTa66B.1.6190.005226
ORF1ab/nsp31036T1036IaCaaTa66P.1.70.001916
ORF1ab/nsp31036T1036IaCaaTa55AY.930.001365
ORF1ab/nsp31036T1036IaCaaTa55B.1.1.280.001556
ORF1ab/nsp31036T1036IaCaaTa55B.1.1.5190.000199
ORF1ab/nsp31036T1036IaCaaTa55B.1.360.00073
ORF1ab/nsp31036T1036IaCaaTa55B.1.617.10.000645
ORF1ab/nsp31036T1036IaCaaTa44A.2.5.10.019231
ORF1ab/nsp31036T1036IaCaaTa44A.210.01108
ORF1ab/nsp31036T1036IaCaaTa44AY.140.000352
ORF1ab/nsp31036T1036IaCaaTa44AY.46.50.000794
ORF1ab/nsp31036T1036IaCaaTa44B.1.1.10.001307
ORF1ab/nsp31036T1036IaCaaTa44B.1.1.1760.001757
ORF1ab/nsp31036T1036IaCaaTa44B.1.1.2940.005063
ORF1ab/nsp31036T1036IaCaaTa44B.1.1.3340.065574
ORF1ab/nsp31036T1036IaCaaTa44B.1.1.3480.003185
ORF1ab/nsp31036T1036IaCaaTa44B.1.1.4860.006309
ORF1ab/nsp31036T1036IaCaaTa44B.1.177.860.000734
ORF1ab/nsp31036T1036IaCaaTa44B.1.3910.00451
ORF1ab/nsp31036T1036IaCaaTa44B.1.5170.001708
ORF1ab/nsp31036T1036IaCaaTa44B.1.5650.003241
ORF1ab/nsp31036T1036IaCaaTa44B.1.5750.001214
ORF1ab/nsp31036T1036IaCaaTa44B.6.60.003556
ORF1ab/nsp31036T1036IaCaaTa44Q.20.002454
ORF1ab/nsp31036T1036IaCaaTa44Q.30.00058
ORF1ab/nsp31036T1036IaCaaTa44Q.40.001819
ORF1ab/nsp31036T1036IaCaaTa33A.280.007937
ORF1ab/nsp31036T1036IaCaaTa33AY.1080.003308
ORF1ab/nsp31036T1036IaCaaTa33AY.280.005671
ORF1ab/nsp31036T1036IaCaaTa33AY.300.001187
ORF1ab/nsp31036T1036IaCaaTa33AY.4.50.000322
ORF1ab/nsp31036T1036IaCaaTa33AY.46.20.001906
ORF1ab/nsp31036T1036IaCaaTa33AY.550.002752
ORF1ab/nsp31036T1036IaCaaTa33B.1.1.2320.005445
ORF1ab/nsp31036T1036IaCaaTa33B.1.1.250.001706
ORF1ab/nsp31036T1036IaCaaTa33B.1.1.3110.001074
ORF1ab/nsp31036T1036IaCaaTa33B.1.1.4340.001046
ORF1ab/nsp31036T1036IaCaaTa33B.1.1.500.002037
ORF1ab/nsp31036T1036IaCaaTa33B.1.1.5260.010638
ORF1ab/nsp31036T1036IaCaaTa33B.1.1100.013575
ORF1ab/nsp31036T1036IaCaaTa33B.1.1110.003525
ORF1ab/nsp31036T1036IaCaaTa33B.1.160.180.021898
ORF1ab/nsp31036T1036IaCaaTa33B.1.2060.002447
ORF1ab/nsp31036T1036IaCaaTa33B.1.258.140.002941
ORF1ab/nsp31036T1036IaCaaTa33B.1.4330.009585
ORF1ab/nsp31036T1036IaCaaTa33B.1.466.20.001174
ORF1ab/nsp31036T1036IaCaaTa33B.1.5760.00272
ORF1ab/nsp31036T1036IaCaaTa33B.1.5820.001472
ORF1ab/nsp31036T1036IaCaaTa33B.1.5950.000783
ORF1ab/nsp31036T1036IaCaaTa33B.1.6250.007059
ORF1ab/nsp31036T1036IaCaaTa33B.1.6370.000219
ORF1ab/nsp31036T1036IaCaaTa33Q.10.000379
ORF1ab/nsp31036T1036IaCaaTa22A0.000774
ORF1ab/nsp31036T1036IaCaaTa22A.2.5.20.003145
ORF1ab/nsp31036T1036IaCaaTa22AD.20.000438
ORF1ab/nsp31036T1036IaCaaTa22AW.10.006098
ORF1ab/nsp31036T1036IaCaaTa22AY.1040.003968
ORF1ab/nsp31036T1036IaCaaTa22AY.1060.00067
ORF1ab/nsp31036T1036IaCaaTa22AY.120.10.000642
ORF1ab/nsp31036T1036IaCaaTa22AY.120.2.10.000997
ORF1ab/nsp31036T1036IaCaaTa22AY.23.10.000835
ORF1ab/nsp31036T1036IaCaaTa22AY.39.20.003082
ORF1ab/nsp31036T1036IaCaaTa22AY.730.001331
ORF1ab/nsp31036T1036IaCaaTa22AY.740.000231
ORF1ab/nsp31036T1036IaCaaTa22AY.770.002255
ORF1ab/nsp31036T1036IaCaaTa22AY.9.10.000167
ORF1ab/nsp31036T1036IaCaaTa22AY.900.001369
ORF1ab/nsp31036T1036IaCaaTa22AY.940.000885
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.2160.001781
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.2890.004167
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.3160.00185
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.3180.000604
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.370.000386
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.3970.004505
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.3980.006452
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.4170.005405
ORF1ab/nsp31036T1036IaCaaTa22B.1.1.630.000772
ORF1ab/nsp31036T1036IaCaaTa22B.1.177.120.000303
ORF1ab/nsp31036T1036IaCaaTa22B.1.177.150.001262
ORF1ab/nsp31036T1036IaCaaTa22B.1.177.190.002861
ORF1ab/nsp31036T1036IaCaaTa22B.1.177.600.000437
ORF1ab/nsp31036T1036IaCaaTa22B.1.177.730.001133
ORF1ab/nsp31036T1036IaCaaTa22B.1.2360.004107
ORF1ab/nsp31036T1036IaCaaTa22B.1.36.160.002849
ORF1ab/nsp31036T1036IaCaaTa22B.1.36.180.00084
ORF1ab/nsp31036T1036IaCaaTa22B.1.36.80.002
ORF1ab/nsp31036T1036IaCaaTa22B.1.3690.00057
ORF1ab/nsp31036T1036IaCaaTa22B.1.4000.000858
ORF1ab/nsp31036T1036IaCaaTa22B.1.4090.001563
ORF1ab/nsp31036T1036IaCaaTa22B.1.4220.001625
ORF1ab/nsp31036T1036IaCaaTa22B.1.438.10.000215
ORF1ab/nsp31036T1036IaCaaTa22B.1.4710.005464
ORF1ab/nsp31036T1036IaCaaTa22B.1.4990.002101
ORF1ab/nsp31036T1036IaCaaTa22B.1.5090.001732
ORF1ab/nsp31036T1036IaCaaTa22B.1.5610.000794
ORF1ab/nsp31036T1036IaCaaTa22B.1.596.10.018692
ORF1ab/nsp31036T1036IaCaaTa22B.1.6020.013072
ORF1ab/nsp31036T1036IaCaaTa22B.1.6270.00404
ORF1ab/nsp31036T1036IaCaaTa22B.450.007663
ORF1ab/nsp31036T1036IaCaaTa22C.140.008658
ORF1ab/nsp31036T1036IaCaaTa22C.180.005181
ORF1ab/nsp31036T1036IaCaaTa22C.230.011628
ORF1ab/nsp31036T1036IaCaaTa22C.360.001821
ORF1ab/nsp31036T1036IaCaaTa22Q.80.00033
ORF1ab/nsp31036T1036IaCaaTa11A.10.000282
ORF1ab/nsp31036T1036IaCaaTa11A.2.40.003367
ORF1ab/nsp31036T1036IaCaaTa11A.270.001656
ORF1ab/nsp31036T1036IaCaaTa11A.40.012821
ORF1ab/nsp31036T1036IaCaaTa11AY.10.000396
ORF1ab/nsp31036T1036IaCaaTa11AY.1010.00049
ORF1ab/nsp31036T1036IaCaaTa11AY.1050.000643
ORF1ab/nsp31036T1036IaCaaTa11AY.1140.000231
ORF1ab/nsp31036T1036IaCaaTa11AY.120.20.001285
ORF1ab/nsp31036T1036IaCaaTa11AY.130.000161
ORF1ab/nsp31036T1036IaCaaTa11AY.150.002222
ORF1ab/nsp31036T1036IaCaaTa11AY.190.00114
ORF1ab/nsp31036T1036IaCaaTa11AY.320.000532
ORF1ab/nsp31036T1036IaCaaTa11AY.360.000148
ORF1ab/nsp31036T1036IaCaaTa11AY.4.30.000842
ORF1ab/nsp31036T1036IaCaaTa11AY.5.30.000337
ORF1ab/nsp31036T1036IaCaaTa11AY.540.000095
ORF1ab/nsp31036T1036IaCaaTa11AY.590.00053
ORF1ab/nsp31036T1036IaCaaTa11AY.610.000105
ORF1ab/nsp31036T1036IaCaaTa11AY.680.000274
ORF1ab/nsp31036T1036IaCaaTa11AY.7.20.000559
ORF1ab/nsp31036T1036IaCaaTa11AY.700.000209
ORF1ab/nsp31036T1036IaCaaTa11AY.710.000475
ORF1ab/nsp31036T1036IaCaaTa11AY.750.000056
ORF1ab/nsp31036T1036IaCaaTa11AY.860.00083
ORF1ab/nsp31036T1036IaCaaTa11AY.870.000833
ORF1ab/nsp31036T1036IaCaaTa11AY.880.000884
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.1010.01
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.120.007463
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.1410.002012
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.1640.005155
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.1890.001513
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.1920.002309
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.1980.001468
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2040.00304
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2070.001182
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2100.005714
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2310.003096
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2430.004082
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.260.005236
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2630.001558
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2740.005051
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2830.023256
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2860.002899
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.2980.000862
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.330.000421
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.3400.045455
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.3440.010753
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.3510.002793
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.3630.005988
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.3720.000689
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.3740.002375
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.4290.004608
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.440.00241
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.5230.001563
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.5280.004808
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.540.003021
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.560.017857
ORF1ab/nsp31036T1036IaCaaTa11B.1.1.700.000341
ORF1ab/nsp31036T1036IaCaaTa11B.1.1080.005814
ORF1ab/nsp31036T1036IaCaaTa11B.1.1260.001276
ORF1ab/nsp31036T1036IaCaaTa11B.1.1570.002985
ORF1ab/nsp31036T1036IaCaaTa11B.1.160.140.002119
ORF1ab/nsp31036T1036IaCaaTa11B.1.160.220.006757
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ORF1ab/nsp31036T1036IaCaaTa11Z.10.00289