CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp3 : CodonNum = 1031

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp31031D1031DD1849DsyngaCgaT230922309215810-5812
ORF1ab/nsp31031D1031ND1849NnonsynGacAac2322310.995695810-5812
ORF1ab/nsp31031D1031ND1849NnonsynGaCAaT23210.004310345810-5812
ORF1ab/nsp31031D1031ED1849EnonsyngaCgaA49410.8367355810-5812
ORF1ab/nsp31031D1031ED1849EnonsyngaCgaG4980.1632655810-5812
ORF1ab/nsp31031D1031delD1849deldelGAC---222215810-5812
ORF1ab/nsp31031D1031YD1849YnonsynGacTac21200.9523815810-5812
ORF1ab/nsp31031D1031YD1849YnonsynGaCTaT2110.0476195810-5812
ORF1ab/nsp31031D1031HD1849HnonsynGacCac5515810-5812
ORF1ab/nsp31031D1031del1D1849del1delGac-ac540.85810-5812
ORF1ab/nsp31031D1031del1D1849del1delgaCga-510.25810-5812
ORF1ab/nsp31031D1031GD1849GnonsyngAcgGc320.6666675810-5812
ORF1ab/nsp31031D1031GD1849GnonsyngACgGT310.3333335810-5812
ORF1ab/nsp31031D1031SD1849SnonsynGAcTCc2215810-5812
ORF1ab/nsp31031D1031AD1849AnonsyngAcgCc210.55810-5812
ORF1ab/nsp31031D1031AD1849AnonsyngACgCT210.55810-5812
ORF1ab/nsp31031D1031VD1849VnonsyngAcgTc1115810-5812
ORF1ab/nsp31031D1031FD1849FnonsynGACTTT1115810-5812
ORF1ab/nsp31031D1031del2D1849del2delGAc--c1115810-5812
ORF1ab/nsp31031D1031RD1849RnonsynGAcCGc1115810-5812

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp31031D1031DgaCgaT2309223092All0.004417
ORF1ab/nsp31031D1031DgaCgaT40514051AY.1030.025153
ORF1ab/nsp31031D1031DgaCgaT38443844B.1.617.20.014474
ORF1ab/nsp31031D1031DgaCgaT31113111AY.1000.143127
ORF1ab/nsp31031D1031DgaCgaT23632363B.1.1.70.002115
ORF1ab/nsp31031D1031DgaCgaT763763AY.440.004644
ORF1ab/nsp31031D1031DgaCgaT718718AY.40.001118
ORF1ab/nsp31031D1031DgaCgaT664664AY.250.003994
ORF1ab/nsp31031D1031DgaCgaT471471B.1.20.004147
ORF1ab/nsp31031D1031DgaCgaT416416B.1.36.270.317557
ORF1ab/nsp31031D1031DgaCgaT315315AY.770.35513
ORF1ab/nsp31031D1031DgaCgaT310310AY.430.001373
ORF1ab/nsp31031D1031DgaCgaT244244B.1.1.3720.168044
ORF1ab/nsp31031D1031DgaCgaT235235B.1.351.30.20596
ORF1ab/nsp31031D1031NGacAac231232All0.000044
ORF1ab/nsp31031D1031NGaCAaT1232All0
ORF1ab/nsp31031D1031DgaCgaT197197B.10.001804
ORF1ab/nsp31031D1031DgaCgaT176176AY.100.09327
ORF1ab/nsp31031D1031DgaCgaT176176AY.1200.006543
ORF1ab/nsp31031D1031DgaCgaT176176B.1.6280.062016
ORF1ab/nsp31031D1031DgaCgaT172172AY.1190.006073
ORF1ab/nsp31031D1031DgaCgaT162162P.10.002552
ORF1ab/nsp31031D1031DgaCgaT160160B.1.2340.021111
ORF1ab/nsp31031D1031DgaCgaT151151B.1.177.570.042428
ORF1ab/nsp31031D1031DgaCgaT135135Q.10.017054
ORF1ab/nsp31031D1031DgaCgaT134134AY.30.001333
ORF1ab/nsp31031D1031DgaCgaT133133B.1.1.2220.027132
ORF1ab/nsp31031D1031DgaCgaT131131B.1.360.019113
ORF1ab/nsp31031D1031DgaCgaT128128B.1.1770.001685
ORF1ab/nsp31031D1031DgaCgaT119119C.380.959677
ORF1ab/nsp31031D1031DgaCgaT117117B.1.1.4340.040781
ORF1ab/nsp31031D1031DgaCgaT117117B.1.177.70.019288
ORF1ab/nsp31031D1031DgaCgaT112112B.1.258.170.011645
ORF1ab/nsp31031D1031DgaCgaT109109AY.1020.00289
ORF1ab/nsp31031D1031DgaCgaT109109AY.750.006106
ORF1ab/nsp31031D1031DgaCgaT106106B.1.10.001923
ORF1ab/nsp31031D1031DgaCgaT9696B.1.1600.002994
ORF1ab/nsp31031D1031DgaCgaT9191B.1.1.5190.003614
ORF1ab/nsp31031D1031DgaCgaT8585B.1.4290.002
ORF1ab/nsp31031D1031DgaCgaT8383B.1.1.2341
ORF1ab/nsp31031D1031DgaCgaT7676B.1.4060.460606
ORF1ab/nsp31031D1031DgaCgaT7272B.1.5250.008148
ORF1ab/nsp31031D1031DgaCgaT7070B.1.3510.002081
ORF1ab/nsp31031D1031DgaCgaT6060B.1.5960.005228
ORF1ab/nsp31031D1031DgaCgaT5858B.1.177.810.010981
ORF1ab/nsp31031D1031DgaCgaT5858B.1.2430.004036
ORF1ab/nsp31031D1031DgaCgaT5353AY.290.000836
ORF1ab/nsp31031D1031EgaCgaA4149All0.000008
ORF1ab/nsp31031D1031EgaCgaG849All0.000002
ORF1ab/nsp31031D1031DgaCgaT4848AY.420.001931
ORF1ab/nsp31031D1031DgaCgaT4545AY.46.60.003249
ORF1ab/nsp31031D1031DgaCgaT4343B.1.5260.001011
ORF1ab/nsp31031D1031NGacAac4242B.1.1.70.000038
ORF1ab/nsp31031D1031DgaCgaT4141AY.1170.003465
ORF1ab/nsp31031D1031DgaCgaT3939B.1.2320.020956
ORF1ab/nsp31031D1031DgaCgaT3838AY.50.000785
ORF1ab/nsp31031D1031DgaCgaT3737AY.390.000914
ORF1ab/nsp31031D1031DgaCgaT3737AY.4.20.000802
ORF1ab/nsp31031D1031DgaCgaT3636AY.200.001399
ORF1ab/nsp31031D1031DgaCgaT3535B.1.258.220.093333
ORF1ab/nsp31031D1031DgaCgaT3131C.370.003598
ORF1ab/nsp31031D1031NGacAac3030AY.40.000047
ORF1ab/nsp31031D1031DgaCgaT3030AY.9.20.001102
ORF1ab/nsp31031D1031DgaCgaT2929AY.980.002291
ORF1ab/nsp31031D1031DgaCgaT2929B.1.1.2970.064877
ORF1ab/nsp31031D1031DgaCgaT2828B.1.6370.002046
ORF1ab/nsp31031D1031DgaCgaT2626A.2.5.10.125
ORF1ab/nsp31031D1031DgaCgaT2525AY.260.000708
ORF1ab/nsp31031D1031DgaCgaT2525P.1.140.001195
ORF1ab/nsp31031D1031DgaCgaT2525Q.80.004123
ORF1ab/nsp31031D1031DgaCgaT2424AY.60.000987
ORF1ab/nsp31031D1031DgaCgaT2424AY.610.002515
ORF1ab/nsp31031D1031DgaCgaT2424AY.900.016427
ORF1ab/nsp31031D1031DgaCgaT2323AY.230.001604
ORF1ab/nsp31031D1031DgaCgaT2323AY.3.10.001961
ORF1ab/nsp31031D1031DgaCgaT2323B.1.1.2040.069909
ORF1ab/nsp31031D1031delGAC---2222All0.000004
ORF1ab/nsp31031D1031DgaCgaT2222AY.75.10.003967
ORF1ab/nsp31031D1031NGacAac2222B.1.2430.001531
ORF1ab/nsp31031D1031YGacTac2021All0.000004
ORF1ab/nsp31031D1031YGaCTaT121All0
ORF1ab/nsp31031D1031DgaCgaT2121B.1.2580.001397
ORF1ab/nsp31031D1031DgaCgaT2020AY.470.000622
ORF1ab/nsp31031D1031DgaCgaT2020B.1.6210.00177
ORF1ab/nsp31031D1031DgaCgaT1919B.1.1.3390.2
ORF1ab/nsp31031D1031DgaCgaT1818AY.650.009595
ORF1ab/nsp31031D1031DgaCgaT1717AY.39.10.000673
ORF1ab/nsp31031D1031DgaCgaT1717AY.90.001149
ORF1ab/nsp31031D1031DgaCgaT1717B.1.4270.000858
ORF1ab/nsp31031D1031NGacAac1616AY.1030.000099
ORF1ab/nsp31031D1031DgaCgaT1616AY.140.001408
ORF1ab/nsp31031D1031NGacAac1616AY.250.000096
ORF1ab/nsp31031D1031DgaCgaT1616AY.460.001665
ORF1ab/nsp31031D1031DgaCgaT1616B.1.4990.016807
ORF1ab/nsp31031D1031DgaCgaT1616B.1.6230.008584
ORF1ab/nsp31031D1031DgaCgaT1515AY.99.20.001382
ORF1ab/nsp31031D1031DgaCgaT1515B.1.36.10.017104
ORF1ab/nsp31031D1031DgaCgaT1414AY.920.004022
ORF1ab/nsp31031D1031DgaCgaT1414B.1.3110.003844
ORF1ab/nsp31031D1031DgaCgaT1313AY.330.000868
ORF1ab/nsp31031D1031DgaCgaT1313AY.350.00303
ORF1ab/nsp31031D1031DgaCgaT1313AY.360.001927
ORF1ab/nsp31031D1031DgaCgaT1313AY.450.001582
ORF1ab/nsp31031D1031DgaCgaT1313AY.5.30.004386
ORF1ab/nsp31031D1031DgaCgaT1313B.1.1.3060.005699
ORF1ab/nsp31031D1031DgaCgaT1313P.1.90.0625
ORF1ab/nsp31031D1031NGacAac1212AY.420.000483
ORF1ab/nsp31031D1031DgaCgaT1212B.1.1.370.002314
ORF1ab/nsp31031D1031DgaCgaT1212B.1.3050.025806
ORF1ab/nsp31031D1031DgaCgaT1111AY.98.10.000533
ORF1ab/nsp31031D1031DgaCgaT1111B.1.4090.008594
ORF1ab/nsp31031D1031DgaCgaT1010AY.1130.001424
ORF1ab/nsp31031D1031DgaCgaT99AY.46.40.001481
ORF1ab/nsp31031D1031DgaCgaT99AY.530.002588
ORF1ab/nsp31031D1031DgaCgaT99B.1.1.3170.003705
ORF1ab/nsp31031D1031DgaCgaT99B.1.177.600.001966
ORF1ab/nsp31031D1031DgaCgaT99B.1.2400.00194
ORF1ab/nsp31031D1031DgaCgaT99B.1.258.40.031034
ORF1ab/nsp31031D1031DgaCgaT99B.1.3670.007132
ORF1ab/nsp31031D1031DgaCgaT99B.1.3800.059603
ORF1ab/nsp31031D1031DgaCgaT99B.1.5610.003573
ORF1ab/nsp31031D1031DgaCgaT88AY.1010.003923
ORF1ab/nsp31031D1031EgaCgaA88AY.1030.00005
ORF1ab/nsp31031D1031DgaCgaT88AY.810.015936
ORF1ab/nsp31031D1031DgaCgaT88AY.840.0035
ORF1ab/nsp31031D1031DgaCgaT88B.1.1.3180.002414
ORF1ab/nsp31031D1031DgaCgaT88B.1.1.630.003086
ORF1ab/nsp31031D1031DgaCgaT88P.1.70.002554
ORF1ab/nsp31031D1031DgaCgaT88P.20.001493
ORF1ab/nsp31031D1031DgaCgaT77A.210.019391
ORF1ab/nsp31031D1031DgaCgaT77AY.1180.000439
ORF1ab/nsp31031D1031DgaCgaT77AY.190.007982
ORF1ab/nsp31031D1031DgaCgaT77B.1.1.10.002287
ORF1ab/nsp31031D1031DgaCgaT77B.1.1.2070.008274
ORF1ab/nsp31031D1031DgaCgaT77B.1.1.3660.111111
ORF1ab/nsp31031D1031DgaCgaT77B.1.140.122807
ORF1ab/nsp31031D1031DgaCgaT77D.20.000525
ORF1ab/nsp31031D1031NGacAac77P.10.00011
ORF1ab/nsp31031D1031NGacAac77P.1.70.002235
ORF1ab/nsp31031D1031DgaCgaT66AY.1060.002009
ORF1ab/nsp31031D1031DgaCgaT66AY.1070.002796
ORF1ab/nsp31031D1031DgaCgaT66AY.1110.001099
ORF1ab/nsp31031D1031NGacAac66AY.30.00006
ORF1ab/nsp31031D1031DgaCgaT66AY.320.003195
ORF1ab/nsp31031D1031DgaCgaT66AY.4.40.002455
ORF1ab/nsp31031D1031DgaCgaT66AY.400.005786
ORF1ab/nsp31031D1031DgaCgaT66AY.46.20.003812
ORF1ab/nsp31031D1031DgaCgaT66AY.590.003178
ORF1ab/nsp31031D1031DgaCgaT66B0.000767
ORF1ab/nsp31031D1031YGacTac66B.10.000055
ORF1ab/nsp31031D1031DgaCgaT66B.1.1.1570.005479
ORF1ab/nsp31031D1031DgaCgaT66B.1.1.280.001867
ORF1ab/nsp31031D1031DgaCgaT66B.1.4560.019608
ORF1ab/nsp31031D1031DgaCgaT66B.1.5090.005195
ORF1ab/nsp31031D1031DgaCgaT66P.1.170.000971
ORF1ab/nsp31031D1031HGacCac55All0.000001
ORF1ab/nsp31031D1031del1Gac-ac45All0.000001
ORF1ab/nsp31031D1031del1gaCga-15All0
ORF1ab/nsp31031D1031DgaCgaT55AY.1080.005513
ORF1ab/nsp31031D1031DgaCgaT55AY.1090.003698
ORF1ab/nsp31031D1031NGacAac55AY.200.000194
ORF1ab/nsp31031D1031NGacAac55AY.430.000022
ORF1ab/nsp31031D1031DgaCgaT55AY.46.50.000992
ORF1ab/nsp31031D1031DgaCgaT55AY.620.002179
ORF1ab/nsp31031D1031DgaCgaT55AY.7.10.000564
ORF1ab/nsp31031D1031DgaCgaT55AY.730.003327
ORF1ab/nsp31031D1031DgaCgaT55AY.780.007704
ORF1ab/nsp31031D1031NGacAac55B.10.000046
ORF1ab/nsp31031D1031DgaCgaT55B.1.1.500.003394
ORF1ab/nsp31031D1031DgaCgaT55B.1.177.40.001055
ORF1ab/nsp31031D1031DgaCgaT55B.1.351.20.001513
ORF1ab/nsp31031D1031DgaCgaT55B.1.36.310.008757
ORF1ab/nsp31031D1031DgaCgaT55B.1.3690.001426
ORF1ab/nsp31031D1031EgaCgaA55B.1.617.20.000019
ORF1ab/nsp31031D1031NGacAac55B.1.617.20.000019
ORF1ab/nsp31031D1031DgaCgaT55P.1.120.00242
ORF1ab/nsp31031D1031DgaCgaT55Q.20.003067
ORF1ab/nsp31031D1031DgaCgaT44A.2.50.001996
ORF1ab/nsp31031D1031DgaCgaT44A.240.285714
ORF1ab/nsp31031D1031EgaCgaA44AY.1020.000106
ORF1ab/nsp31031D1031DgaCgaT44AY.1100.000451
ORF1ab/nsp31031D1031DgaCgaT44AY.1140.000924
ORF1ab/nsp31031D1031DgaCgaT44AY.1210.000541
ORF1ab/nsp31031D1031DgaCgaT44AY.23.10.001669
ORF1ab/nsp31031D1031DgaCgaT44AY.240.001724
ORF1ab/nsp31031D1031DgaCgaT44AY.300.001583
ORF1ab/nsp31031D1031DgaCgaT44AY.34.10.00204
ORF1ab/nsp31031D1031NGacAac44AY.440.000024
ORF1ab/nsp31031D1031DgaCgaT44AY.510.003636
ORF1ab/nsp31031D1031DgaCgaT44AY.540.000381
ORF1ab/nsp31031D1031DgaCgaT44AY.740.000463
ORF1ab/nsp31031D1031DgaCgaT44B.1.1.4870.022346
ORF1ab/nsp31031D1031DgaCgaT44B.1.1.5250.021858
ORF1ab/nsp31031D1031delGAC---44B.1.1.70.000004
ORF1ab/nsp31031D1031DgaCgaT44B.1.1.700.001364
ORF1ab/nsp31031D1031DgaCgaT44B.1.177.870.002911
ORF1ab/nsp31031D1031DgaCgaT44B.1.2210.000284
ORF1ab/nsp31031D1031DgaCgaT44B.1.36.80.004
ORF1ab/nsp31031D1031EgaCgaA44B.1.3960.002823
ORF1ab/nsp31031D1031DgaCgaT44B.1.3960.002823
ORF1ab/nsp31031D1031DgaCgaT44B.1.466.20.001565
ORF1ab/nsp31031D1031DgaCgaT44B.1.4700.005618
ORF1ab/nsp31031D1031DgaCgaT44B.1.5320.024845
ORF1ab/nsp31031D1031DgaCgaT44N.40.017021
ORF1ab/nsp31031D1031DgaCgaT44P.1.150.000929
ORF1ab/nsp31031D1031DgaCgaT33A0.001161
ORF1ab/nsp31031D1031DgaCgaT33A.10.000846
ORF1ab/nsp31031D1031GgAcgGc23All0
ORF1ab/nsp31031D1031GgACgGT13All0
ORF1ab/nsp31031D1031DgaCgaT33AY.1160.00086
ORF1ab/nsp31031D1031DgaCgaT33AY.270.000194
ORF1ab/nsp31031D1031DgaCgaT33AY.370.000948
ORF1ab/nsp31031D1031DgaCgaT33AY.4.50.000322
ORF1ab/nsp31031D1031DgaCgaT33AY.410.000882
ORF1ab/nsp31031D1031NGacAac33AY.570.001969
ORF1ab/nsp31031D1031DgaCgaT33AY.690.00056
ORF1ab/nsp31031D1031DgaCgaT33AY.850.001282
ORF1ab/nsp31031D1031DgaCgaT33AY.910.002191
ORF1ab/nsp31031D1031DgaCgaT33AY.990.003148
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.1860.010309
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.1920.006928
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.2140.000166
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.2160.002671
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.2430.012245
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.2840.000322
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.2880.005747
ORF1ab/nsp31031D1031DgaCgaT33B.1.1.4320.003797
ORF1ab/nsp31031D1031del1Gac-ac23B.1.1.70.000002
ORF1ab/nsp31031D1031EgaCgaG23B.1.1.70.000002
ORF1ab/nsp31031D1031del1gaCga-13B.1.1.70.000001
ORF1ab/nsp31031D1031EgaCgaA13B.1.1.70.000001
ORF1ab/nsp31031D1031DgaCgaT33B.1.3320.01049
ORF1ab/nsp31031D1031DgaCgaT33B.1.3970.014563
ORF1ab/nsp31031D1031DgaCgaT33B.1.4330.009585
ORF1ab/nsp31031D1031DgaCgaT33B.1.438.10.000322
ORF1ab/nsp31031D1031DgaCgaT33B.1.5770.002062
ORF1ab/nsp31031D1031DgaCgaT33B.1.617.10.000387
ORF1ab/nsp31031D1031NGacAac33B.1.617.10.000387
ORF1ab/nsp31031D1031DgaCgaT33B.1.6180.012097
ORF1ab/nsp31031D1031DgaCgaT33B.1.6190.002613
ORF1ab/nsp31031D1031DgaCgaT33C.360.002732
ORF1ab/nsp31031D1031DgaCgaT33C.36.3.10.008152
ORF1ab/nsp31031D1031EgaCgaA23P.10.000032
ORF1ab/nsp31031D1031EgaCgaG13P.10.000016
ORF1ab/nsp31031D1031DgaCgaT33P.1.10.000953
ORF1ab/nsp31031D1031NGacAac33P.1.140.000143
ORF1ab/nsp31031D1031DgaCgaT33P.1.20.003468
ORF1ab/nsp31031D1031DgaCgaT33R.10.00027
ORF1ab/nsp31031D1031DgaCgaT22A.20.001324
ORF1ab/nsp31031D1031DgaCgaT22A.23.10.001408
ORF1ab/nsp31031D1031SGAcTCc22All0
ORF1ab/nsp31031D1031AgACgCT12All0
ORF1ab/nsp31031D1031AgAcgCc12All0
ORF1ab/nsp31031D1031NGacAac22AY.1180.000125
ORF1ab/nsp31031D1031DgaCgaT22AY.120.000632
ORF1ab/nsp31031D1031NGacAac22AY.1200.000074
ORF1ab/nsp31031D1031DgaCgaT22AY.120.2.10.000997
ORF1ab/nsp31031D1031DgaCgaT22AY.16.10.00094
ORF1ab/nsp31031D1031DgaCgaT22AY.340.000194
ORF1ab/nsp31031D1031NGacAac22AY.39.10.000079
ORF1ab/nsp31031D1031HGacCac22AY.40.000003
ORF1ab/nsp31031D1031DgaCgaT22AY.480.00093
ORF1ab/nsp31031D1031DgaCgaT22AY.5.40.000553
ORF1ab/nsp31031D1031NGacAac22AY.540.000191
ORF1ab/nsp31031D1031DgaCgaT22AY.550.001835
ORF1ab/nsp31031D1031DgaCgaT22AY.580.001815
ORF1ab/nsp31031D1031NGacAac22AY.60.000082
ORF1ab/nsp31031D1031DgaCgaT22AY.670.000929
ORF1ab/nsp31031D1031DgaCgaT22AY.930.000546
ORF1ab/nsp31031D1031DgaCgaT22AY.940.000885
ORF1ab/nsp31031D1031NGacAac22AZ.20.001642
ORF1ab/nsp31031D1031DgaCgaT22AZ.20.001642
ORF1ab/nsp31031D1031DgaCgaT22AZ.30.00304
ORF1ab/nsp31031D1031SGAcTCc22B.10.000018
ORF1ab/nsp31031D1031delGAC---22B.10.000018
ORF1ab/nsp31031D1031AgACgCT12B.10.000009
ORF1ab/nsp31031D1031AgAcgCc12B.10.000009
ORF1ab/nsp31031D1031YGacTac22B.1.10.000036
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.1530.002191
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.2310.006192
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.3160.00185
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.3370.007194
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.3540.008772
ORF1ab/nsp31031D1031EgaCgaA22B.1.1.3680.006173
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.3750.02381
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.390.001019
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.3980.006452
ORF1ab/nsp31031D1031DgaCgaT22B.1.1.5210.010695
ORF1ab/nsp31031D1031HGacCac22B.1.1.70.000002
ORF1ab/nsp31031D1031DgaCgaT22B.1.1260.002551
ORF1ab/nsp31031D1031DgaCgaT22B.1.2360.004107
ORF1ab/nsp31031D1031DgaCgaT22B.1.258.110.000793
ORF1ab/nsp31031D1031DgaCgaT22B.1.258.190.014184
ORF1ab/nsp31031D1031DgaCgaT22B.1.3400.008584
ORF1ab/nsp31031D1031delGAC---22B.1.360.000292
ORF1ab/nsp31031D1031DgaCgaT22B.1.36.290.001035
ORF1ab/nsp31031D1031DgaCgaT22B.1.3890.002004
ORF1ab/nsp31031D1031DgaCgaT22B.1.4000.000858
ORF1ab/nsp31031D1031DgaCgaT22B.1.4030.006536
ORF1ab/nsp31031D1031DgaCgaT22B.1.4160.002538
ORF1ab/nsp31031D1031DgaCgaT22B.1.428.20.066667
ORF1ab/nsp31031D1031NGacAac22B.1.4290.000047
ORF1ab/nsp31031D1031NGacAac22B.1.438.10.000215
ORF1ab/nsp31031D1031DgaCgaT22B.1.4970.00063
ORF1ab/nsp31031D1031DgaCgaT22B.1.5050.008772
ORF1ab/nsp31031D1031DgaCgaT22B.1.5270.007407
ORF1ab/nsp31031D1031DgaCgaT22B.1.5660.038462
ORF1ab/nsp31031D1031DgaCgaT22B.1.5950.000522
ORF1ab/nsp31031D1031DgaCgaT22B.1.6090.000959
ORF1ab/nsp31031D1031NGacAac22B.1.6210.000177
ORF1ab/nsp31031D1031del1Gac-ac22B.1.6270.00404
ORF1ab/nsp31031D1031DgaCgaT22C.320.046512
ORF1ab/nsp31031D1031NGacAac22P.1.120.000968
ORF1ab/nsp31031D1031DgaCgaT22P.1.40.001953
ORF1ab/nsp31031D1031EgaCgaA22P.1.60.003891
ORF1ab/nsp31031D1031NGacAac22Q.10.000253
ORF1ab/nsp31031D1031YGacTac11A0.000387
ORF1ab/nsp31031D1031delGAC---11A.2.20.001689
ORF1ab/nsp31031D1031NGacAac11A.2.50.000499
ORF1ab/nsp31031D1031YGacTac11A.50.001923
ORF1ab/nsp31031D1031DgaCgaT11A.50.001923
ORF1ab/nsp31031D1031DgaCgaT11A.60.005128
ORF1ab/nsp31031D1031DgaCgaT11AD.20.000219
ORF1ab/nsp31031D1031del2GAc--c11All0
ORF1ab/nsp31031D1031RGAcCGc11All0
ORF1ab/nsp31031D1031FGACTTT11All0
ORF1ab/nsp31031D1031VgAcgTc11All0
ORF1ab/nsp31031D1031NGacAac11AY.116.10.000311
ORF1ab/nsp31031D1031EgaCgaA11AY.1180.000063
ORF1ab/nsp31031D1031EgaCgaA11AY.1190.000035
ORF1ab/nsp31031D1031DgaCgaT11AY.160.00038
ORF1ab/nsp31031D1031DgaCgaT11AY.210.001898
ORF1ab/nsp31031D1031EgaCgaG11AY.250.000006
ORF1ab/nsp31031D1031DgaCgaT11AY.280.00189
ORF1ab/nsp31031D1031EgaCgaA11AY.30.00001
ORF1ab/nsp31031D1031EgaCgaA11AY.390.000025
ORF1ab/nsp31031D1031NGacAac11AY.390.000025
ORF1ab/nsp31031D1031DgaCgaT11AY.4.2.10.000149
ORF1ab/nsp31031D1031delGAC---11AY.4.30.000842
ORF1ab/nsp31031D1031EgaCgaA11AY.4.50.000107
ORF1ab/nsp31031D1031EgaCgaA11AY.430.000004
ORF1ab/nsp31031D1031EgaCgaA11AY.46.60.000072
ORF1ab/nsp31031D1031delGAC---11AY.470.000031
ORF1ab/nsp31031D1031DgaCgaT11AY.560.001605
ORF1ab/nsp31031D1031DgaCgaT11AY.640.000595
ORF1ab/nsp31031D1031DgaCgaT11AY.70.000196
ORF1ab/nsp31031D1031DgaCgaT11AY.700.000209
ORF1ab/nsp31031D1031DgaCgaT11AY.710.000475
ORF1ab/nsp31031D1031DgaCgaT11AY.720.001361
ORF1ab/nsp31031D1031GgAcgGc11AY.740.000116
ORF1ab/nsp31031D1031DgaCgaT11AY.80.000606
ORF1ab/nsp31031D1031EgaCgaG11AY.850.000427
ORF1ab/nsp31031D1031DgaCgaT11AY.860.00083
ORF1ab/nsp31031D1031DgaCgaT11AY.9.10.000084
ORF1ab/nsp31031D1031NGacAac11AY.9.20.000037
ORF1ab/nsp31031D1031EgaCgaG11AY.900.000684
ORF1ab/nsp31031D1031NGacAac11AY.980.000079
ORF1ab/nsp31031D1031delGAC---11B0.000128
ORF1ab/nsp31031D1031HGacCac11B.10.000009
ORF1ab/nsp31031D1031RGAcCGc11B.10.000009
ORF1ab/nsp31031D1031delGAC---11B.1.10.000018
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.1250.010204
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.1330.008475
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.1380.006061
ORF1ab/nsp31031D1031delGAC---11B.1.1.1390.022727
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.1590.004673
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.1610.003534
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.1890.001513
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.2630.001558
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.2800.003086
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.2890.002083
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.2910.000742
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3010.001179
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3070.002532
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.310.066667
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3110.000358
ORF1ab/nsp31031D1031NGacAac11B.1.1.3180.000302
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3260.001761
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3290.003846
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.330.000421
ORF1ab/nsp31031D1031YGacTac11B.1.1.3350.012987
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3480.000796
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3690.000446
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.3890.006061
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.4070.041667
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.4170.002703
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.4200.001006
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.4630.0625
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.5230.001563
ORF1ab/nsp31031D1031delGAC---11B.1.1.630.000386
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.670.004566
ORF1ab/nsp31031D1031DgaCgaT11B.1.1.740.00431
ORF1ab/nsp31031D1031DgaCgaT11B.1.110.30.000718
ORF1ab/nsp31031D1031DgaCgaT11B.1.1420.002899
ORF1ab/nsp31031D1031EgaCgaG11B.1.1470.000756
ORF1ab/nsp31031D1031DgaCgaT11B.1.160.140.002119
ORF1ab/nsp31031D1031DgaCgaT11B.1.160.190.035714
ORF1ab/nsp31031D1031DgaCgaT11B.1.160.260.002421
ORF1ab/nsp31031D1031NGacAac11B.1.1770.000013
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.160.000664
ORF1ab/nsp31031D1031NGacAac11B.1.177.170.000821
ORF1ab/nsp31031D1031YGacTac11B.1.177.210.000076
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.210.000076
ORF1ab/nsp31031D1031NGacAac11B.1.177.210.000076
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.400.005155
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.420.000894
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.440.000519
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.530.002392
ORF1ab/nsp31031D1031EgaCgaA11B.1.177.550.002331
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.60.000977
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.650.000665
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.690.001484
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.720.00339
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.730.000566
ORF1ab/nsp31031D1031DgaCgaT11B.1.177.820.000477
ORF1ab/nsp31031D1031YGacTac11B.1.20.000009
ORF1ab/nsp31031D1031EgaCgaA11B.1.20.000009
ORF1ab/nsp31031D1031delGAC---11B.1.20.000009
ORF1ab/nsp31031D1031NGacAac11B.1.2100.002132
ORF1ab/nsp31031D1031DgaCgaT11B.1.221.30.000833
ORF1ab/nsp31031D1031DgaCgaT11B.1.2390.001221
ORF1ab/nsp31031D1031DgaCgaT11B.1.2410.000812
ORF1ab/nsp31031D1031delGAC---11B.1.2430.00007
ORF1ab/nsp31031D1031FGACTTT11B.1.2580.000067
ORF1ab/nsp31031D1031YGacTac11B.1.2580.000067
ORF1ab/nsp31031D1031DgaCgaT11B.1.258.140.00098
ORF1ab/nsp31031D1031NGacAac11B.1.258.170.000104
ORF1ab/nsp31031D1031DgaCgaT11B.1.258.200.015873
ORF1ab/nsp31031D1031DgaCgaT11B.1.258.230.02381
ORF1ab/nsp31031D1031DgaCgaT11B.1.2980.002114
ORF1ab/nsp31031D1031YGacTac11B.1.3110.000275
ORF1ab/nsp31031D1031NGacAac11B.1.3110.000275
ORF1ab/nsp31031D1031DgaCgaT11B.1.3240.001605
ORF1ab/nsp31031D1031YGacTac11B.1.3360.002439
ORF1ab/nsp31031D1031YGacTac11B.1.3510.00003
ORF1ab/nsp31031D1031YGaCTaT11B.1.351.30.000876
ORF1ab/nsp31031D1031NGacAac11B.1.360.000146
ORF1ab/nsp31031D1031DgaCgaT11B.1.36.180.00042
ORF1ab/nsp31031D1031DgaCgaT11B.1.36.220.001208
ORF1ab/nsp31031D1031DgaCgaT11B.1.36.280.005747
ORF1ab/nsp31031D1031DgaCgaT11B.1.36.350.002604
ORF1ab/nsp31031D1031DgaCgaT11B.1.36.360.000602
ORF1ab/nsp31031D1031DgaCgaT11B.1.36.70.004
ORF1ab/nsp31031D1031NGacAac11B.1.362.20.004717
ORF1ab/nsp31031D1031DgaCgaT11B.1.3770.004566
ORF1ab/nsp31031D1031DgaCgaT11B.1.3910.001127
ORF1ab/nsp31031D1031DgaCgaT11B.1.3990.001934
ORF1ab/nsp31031D1031DgaCgaT11B.1.4040.001302
ORF1ab/nsp31031D1031DgaCgaT11B.1.4220.000812
ORF1ab/nsp31031D1031DgaCgaT11B.1.4250.002994
ORF1ab/nsp31031D1031GgAcgGc11B.1.4270.00005
ORF1ab/nsp31031D1031YGacTac11B.1.4290.000024
ORF1ab/nsp31031D1031DgaCgaT11B.1.4510.008197
ORF1ab/nsp31031D1031DgaCgaT11B.1.4980.020408
ORF1ab/nsp31031D1031DgaCgaT11B.1.5170.000427
ORF1ab/nsp31031D1031GgACgGT11B.1.5250.000113
ORF1ab/nsp31031D1031NGaCAaT11B.1.5260.000024
ORF1ab/nsp31031D1031DgaCgaT11B.1.5330.009615
ORF1ab/nsp31031D1031DgaCgaT11B.1.5400.009709
ORF1ab/nsp31031D1031DgaCgaT11B.1.5450.014493
ORF1ab/nsp31031D1031DgaCgaT11B.1.5540.004405
ORF1ab/nsp31031D1031NGacAac11B.1.5580.004566
ORF1ab/nsp31031D1031DgaCgaT11B.1.5600.00463
ORF1ab/nsp31031D1031DgaCgaT11B.1.5710.009709
ORF1ab/nsp31031D1031DgaCgaT11B.1.5740.002151
ORF1ab/nsp31031D1031DgaCgaT11B.1.5750.000303
ORF1ab/nsp31031D1031EgaCgaA11B.1.5800.004065
ORF1ab/nsp31031D1031DgaCgaT11B.1.5870.001898
ORF1ab/nsp31031D1031DgaCgaT11B.1.5880.00091
ORF1ab/nsp31031D1031EgaCgaA11B.1.5960.000087
ORF1ab/nsp31031D1031DgaCgaT11B.1.5970.00463
ORF1ab/nsp31031D1031EgaCgaA11B.1.617.10.000129
ORF1ab/nsp31031D1031DgaCgaT11B.1.619.10.000641
ORF1ab/nsp31031D1031YGacTac11B.1.6210.000089
ORF1ab/nsp31031D1031NGacAac11B.1.621.10.000506
ORF1ab/nsp31031D1031EgaCgaG11B.1.6370.000073
ORF1ab/nsp31031D1031DgaCgaT11B.1.88.10.004808
ORF1ab/nsp31031D1031delGAC---11B.150.017544
ORF1ab/nsp31031D1031DgaCgaT11B.230.002924
ORF1ab/nsp31031D1031delGAC---11B.30.000831
ORF1ab/nsp31031D1031delGAC---11B.340.013699
ORF1ab/nsp31031D1031DgaCgaT11B.400.000364
ORF1ab/nsp31031D1031delGAC---11B.400.000364
ORF1ab/nsp31031D1031delGAC---11B.550.00295
ORF1ab/nsp31031D1031DgaCgaT11C.10.002392
ORF1ab/nsp31031D1031DgaCgaT11C.1.20.004255
ORF1ab/nsp31031D1031DgaCgaT11C.120.007194
ORF1ab/nsp31031D1031DgaCgaT11C.160.00106
ORF1ab/nsp31031D1031DgaCgaT11C.330.058824
ORF1ab/nsp31031D1031del2GAc--c11C.350.000774
ORF1ab/nsp31031D1031DgaCgaT11C.350.000774
ORF1ab/nsp31031D1031NGacAac11C.370.000116
ORF1ab/nsp31031D1031DgaCgaT11C.390.018868
ORF1ab/nsp31031D1031YGacTac11D.20.000075
ORF1ab/nsp31031D1031VgAcgTc11D.20.000075
ORF1ab/nsp31031D1031DgaCgaT11D.30.005917
ORF1ab/nsp31031D1031DgaCgaT11L.20.011364
ORF1ab/nsp31031D1031NGacAac11P.1.10.10.00813
ORF1ab/nsp31031D1031EgaCgaA11P.1.140.000048
ORF1ab/nsp31031D1031DgaCgaT11P.30.001595
ORF1ab/nsp31031D1031DgaCgaT11Q.30.000145
ORF1ab/nsp31031D1031DgaCgaT11Q.40.000455
ORF1ab/nsp31031D1031DgaCgaT11Q.70.001111